RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 SUSD3Q96L08 255 aa14.45□□□□□ -0.1
VEGFA-219ENST00000518824 LRRC27Q9C0I9 530 aa14.45□□□□□ -0.1
VEGFA-219ENST00000518824 SCAND2PQ9GZW5 306 aaPredicted RBP14.45□□□□□ -0.1
VEGFA-219ENST00000518824 SFXN1Q9H9B4 322 aa14.45□□□□□ -0.1
VEGFA-219ENST00000518824 EXOC7Q9UPT5 735 aa14.45□□□□□ -0.1
VEGFA-219ENST00000518824 NUB1Q9Y5A7 615 aa14.45□□□□□ -0.1
VEGFA-219ENST00000518824 ATP6V1DQ9Y5K8 247 aa14.45□□□□□ -0.1
VEGFA-219ENST00000518824 CDY1Q9Y6F8 540 aa14.45□□□□□ -0.1
VEGFA-219ENST00000518824 TSC2P49815 1807 aa14.44□□□□□ -0.1
VEGFA-219ENST00000518824 CCDC195A0A1B0GUA6 201 aa14.44□□□□□ -0.1
VEGFA-219ENST00000518824 A0A1W2PQ27 194 aa14.44□□□□□ -0.1
VEGFA-219ENST00000518824 A0A1W2PQ64 194 aa14.44□□□□□ -0.1
VEGFA-219ENST00000518824 A0A1W2PQD8 194 aa14.44□□□□□ -0.1
VEGFA-219ENST00000518824 C2CD4DB7Z1M9 353 aa14.44□□□□□ -0.1
VEGFA-219ENST00000518824 CLIC2O15247 247 aa14.44□□□□□ -0.1
VEGFA-219ENST00000518824 TBC1D4O60343 1298 aa14.44□□□□□ -0.1
VEGFA-219ENST00000518824 CYP3A5P20815 502 aa14.44□□□□□ -0.1
VEGFA-219ENST00000518824 GARTP22102 1010 aa14.44□□□□□ -0.1
VEGFA-219ENST00000518824 NUCB2P80303 420 aa14.44□□□□□ -0.1
VEGFA-219ENST00000518824 ITIH3Q06033 890 aa14.44□□□□□ -0.1
VEGFA-219ENST00000518824 STK4Q13043 487 aa14.44□□□□□ -0.1
VEGFA-219ENST00000518824 MRPL58Q14197 206 aaKnown RBP14.44□□□□□ -0.1
VEGFA-219ENST00000518824 TMEM132DQ14C87 1099 aa14.44□□□□□ -0.1
VEGFA-219ENST00000518824 POSTNQ15063 836 aa14.44□□□□□ -0.1
VEGFA-219ENST00000518824 C9orf57Q5W0N0 161 aa14.44□□□□□ -0.1
VEGFA-219ENST00000518824 LMBRD2Q68DH5 695 aaPredicted RBP14.44□□□□□ -0.1
VEGFA-219ENST00000518824 CES5AQ6NT32 575 aa14.44□□□□□ -0.1
VEGFA-219ENST00000518824 RNF135Q8IUD6 432 aa14.44□□□□□ -0.1
VEGFA-219ENST00000518824 BRSK2Q8IWQ3 736 aa14.44□□□□□ -0.1
VEGFA-219ENST00000518824 C11orf16Q9NQ32 467 aa14.44□□□□□ -0.1
VEGFA-219ENST00000518824 MUTYHQ9UIF7 546 aa14.44□□□□□ -0.1
VEGFA-219ENST00000518824 FBXW11Q9UKB1 542 aa14.44□□□□□ -0.1
VEGFA-219ENST00000518824 PTPRJQ12913 1337 aa14.43□□□□□ -0.1
VEGFA-219ENST00000518824 PVALEFA0A1B0GWK0 134 aa14.43□□□□□ -0.1
VEGFA-219ENST00000518824 ANO9A1A5B4 782 aa14.43□□□□□ -0.1
VEGFA-219ENST00000518824 FAM86C2PA6NEL3 165 aa14.43□□□□□ -0.1
VEGFA-219ENST00000518824 SPDYE4A6NLX3 237 aa14.43□□□□□ -0.1
VEGFA-219ENST00000518824 PIRO00625 290 aa14.43□□□□□ -0.1
VEGFA-219ENST00000518824 EIF3DO15371 548 aaKnown RBP eCLIP14.43□□□□□ -0.1
VEGFA-219ENST00000518824 EXTL3O43909 919 aa14.43□□□□□ -0.1
VEGFA-219ENST00000518824 AARSP49588 968 aaKnown RBP eCLIP14.43□□□□□ -0.11e-6■■■■□ 20.6
VEGFA-219ENST00000518824 RAB33AQ14088 237 aa14.43□□□□□ -0.1
VEGFA-219ENST00000518824 ARMCX5Q6P1M9 558 aa14.43□□□□□ -0.1
VEGFA-219ENST00000518824 CBWD2Q8IUF1 395 aa14.43□□□□□ -0.1
VEGFA-219ENST00000518824 BEST2Q8NFU1 509 aa14.43□□□□□ -0.1
VEGFA-219ENST00000518824 ASB7Q9H672 318 aa14.43□□□□□ -0.1
VEGFA-219ENST00000518824 TMEM206Q9H813 350 aa14.43□□□□□ -0.1
VEGFA-219ENST00000518824 PDE11AQ9HCR9 933 aa14.43□□□□□ -0.1
VEGFA-219ENST00000518824 TSHZ2Q9NRE2 1034 aa14.43□□□□□ -0.1
VEGFA-219ENST00000518824 HSPBP1Q9NZL4 362 aa14.43□□□□□ -0.1
VEGFA-219ENST00000518824 WDR27A2RRH5 827 aa14.42□□□□□ -0.1
VEGFA-219ENST00000518824 PI4K2BG5E9Z4 385 aa14.42□□□□□ -0.1
VEGFA-219ENST00000518824 M0QZQ0 153 aa14.42□□□□□ -0.1
VEGFA-219ENST00000518824 SYN3O14994 580 aa14.42□□□□□ -0.1
VEGFA-219ENST00000518824 TRAPPC3O43617 180 aa14.42□□□□□ -0.1
VEGFA-219ENST00000518824 N4BP1O75113 896 aaKnown RBP14.42□□□□□ -0.1
VEGFA-219ENST00000518824 ZNF202O95125 648 aa14.42□□□□□ -0.1
VEGFA-219ENST00000518824 MTHFRP42898 656 aa14.42□□□□□ -0.1
VEGFA-219ENST00000518824 CDR1P51861 262 aa14.42□□□□□ -0.1
VEGFA-219ENST00000518824 ARPP19P56211 112 aa14.42□□□□□ -0.1
VEGFA-219ENST00000518824 LILRA4P59901 499 aa14.42□□□□□ -0.1
VEGFA-219ENST00000518824 NTHL1P78549 312 aa14.42□□□□□ -0.1
VEGFA-219ENST00000518824 ROR1Q01973 937 aa14.42□□□□□ -0.1
VEGFA-219ENST00000518824 BMT2Q1RMZ1 405 aa14.42□□□□□ -0.1
VEGFA-219ENST00000518824 ATAT1Q5SQI0 421 aa14.42□□□□□ -0.1
VEGFA-219ENST00000518824 KRBA2Q6ZNG9 492 aa14.42□□□□□ -0.1
VEGFA-219ENST00000518824 ANKS3Q6ZW76 656 aa14.42□□□□□ -0.1
VEGFA-219ENST00000518824 CD302Q8IX05 232 aa14.42□□□□□ -0.1
VEGFA-219ENST00000518824 GPD1LQ8N335 351 aa14.42□□□□□ -0.1
VEGFA-219ENST00000518824 RDH13Q8NBN7 331 aa14.42□□□□□ -0.1
VEGFA-219ENST00000518824 CXorf38Q8TB03 319 aa14.42□□□□□ -0.1
VEGFA-219ENST00000518824 TMEM209Q96SK2 561 aa14.42□□□□□ -0.1
VEGFA-219ENST00000518824 AGPAT3Q9NRZ7 376 aa14.42□□□□□ -0.1
VEGFA-219ENST00000518824 DPP3Q9NY33 737 aa14.42□□□□□ -0.1
VEGFA-219ENST00000518824 RBAKQ9NYW8 714 aaPredicted RBP14.42□□□□□ -0.1
VEGFA-219ENST00000518824 FBXL5Q9UKA1 691 aa14.42□□□□□ -0.1
VEGFA-219ENST00000518824 PCDHB8Q9UN66 801 aa14.42□□□□□ -0.1
VEGFA-219ENST00000518824 C2CD2Q9Y426 696 aa14.42□□□□□ -0.1
VEGFA-219ENST00000518824 BACE2Q9Y5Z0 518 aa14.42□□□□□ -0.1
VEGFA-219ENST00000518824 NOTCH4Q99466 2003 aa14.42□□□□□ -0.1
VEGFA-219ENST00000518824 MYO10Q9HD67 2058 aa14.42□□□□□ -0.1
VEGFA-219ENST00000518824 CCL16O15467 120 aa14.41□□□□□ -0.1
VEGFA-219ENST00000518824 ZMYND10O75800 440 aa14.41□□□□□ -0.1
VEGFA-219ENST00000518824 SEC24AO95486 1093 aa14.41□□□□□ -0.1
VEGFA-219ENST00000518824 VNN2O95498 520 aa14.41□□□□□ -0.1
VEGFA-219ENST00000518824 C8AP07357 584 aa14.41□□□□□ -0.1
VEGFA-219ENST00000518824 OR4Q2P0C623 313 aa14.41□□□□□ -0.1
VEGFA-219ENST00000518824 CYP2J2P51589 502 aa14.41□□□□□ -0.1
VEGFA-219ENST00000518824 TFAMQ00059 246 aaKnown RBP14.41□□□□□ -0.1
VEGFA-219ENST00000518824 DPYDQ12882 1025 aa14.41□□□□□ -0.1
VEGFA-219ENST00000518824 CTXN3Q4LDR2 81 aa14.41□□□□□ -0.1
VEGFA-219ENST00000518824 C1orf127Q8N9H9 656 aa14.41□□□□□ -0.1
VEGFA-219ENST00000518824 ST13P5Q8NFI4 369 aaPredicted RBP14.41□□□□□ -0.1
VEGFA-219ENST00000518824 CMASQ8NFW8 434 aaPredicted RBP14.41□□□□□ -0.1
VEGFA-219ENST00000518824 OR5B17Q8NGF7 314 aa14.41□□□□□ -0.1
VEGFA-219ENST00000518824 SMG7Q92540 1137 aaKnown RBP14.41□□□□□ -0.1
VEGFA-219ENST00000518824 BORCS6Q96GS4 357 aa14.41□□□□□ -0.1
VEGFA-219ENST00000518824 SENP8Q96LD8 212 aa14.41□□□□□ -0.1
VEGFA-219ENST00000518824 RIPOR3Q96MK2 946 aa14.41□□□□□ -0.1
VEGFA-219ENST00000518824 POP1Q99575 1024 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms