RNA–Protein interactions for RNA: ENST00000518293.5

PABPC1-206, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-206ENST00000518293 ZNF768Q9H5H4 540 aaKnown RBP4.87□□□□□ -1.63
PABPC1-206ENST00000518293 FAM30AQ9NZY2 134 aa4.87□□□□□ -1.63
PABPC1-206ENST00000518293 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.87□□□□□ -1.63
PABPC1-206ENST00000518293 EIF2B4Q9UI10 523 aaKnown RBP4.87□□□□□ -1.63
PABPC1-206ENST00000518293 REXO2Q9Y3B8 237 aaKnown RBP4.87□□□□□ -1.63
PABPC1-206ENST00000518293 CHST2Q9Y4C5 530 aa4.87□□□□□ -1.63
PABPC1-206ENST00000518293 ARHGEF12Q9NZN5 1544 aa4.87□□□□□ -1.63
PABPC1-206ENST00000518293 TRIM24O15164 1050 aa4.86□□□□□ -1.63
PABPC1-206ENST00000518293 TEX33O43247 280 aa4.86□□□□□ -1.63
PABPC1-206ENST00000518293 AKAP10O43572 662 aa4.86□□□□□ -1.63
PABPC1-206ENST00000518293 SGTAO43765 313 aa4.86□□□□□ -1.63
PABPC1-206ENST00000518293 PPFIA2O75334 1257 aa4.86□□□□□ -1.63
PABPC1-206ENST00000518293 IL33O95760 270 aa4.86□□□□□ -1.63
PABPC1-206ENST00000518293 POU2F2P09086 479 aa4.86□□□□□ -1.63
PABPC1-206ENST00000518293 ZSCAN20P17040 1043 aaPredicted RBP4.86□□□□□ -1.63
PABPC1-206ENST00000518293 MGAT1P26572 445 aa4.86□□□□□ -1.63
PABPC1-206ENST00000518293 ZFP36P26651 326 aaKnown RBP4.86□□□□□ -1.63
PABPC1-206ENST00000518293 FXR1P51114 621 aaKnown RBP eCLIP4.86□□□□□ -1.63
PABPC1-206ENST00000518293 ZNF280AP59817 542 aaPredicted RBP4.86□□□□□ -1.63
PABPC1-206ENST00000518293 RNASE9P60153 205 aaKnown RBP4.86□□□□□ -1.63
PABPC1-206ENST00000518293 NANOS3P60323 173 aaKnown RBP4.86□□□□□ -1.63
PABPC1-206ENST00000518293 FAM189BP81408 668 aa4.86□□□□□ -1.63
PABPC1-206ENST00000518293 ZNF529Q6P280 563 aa4.86□□□□□ -1.63
PABPC1-206ENST00000518293 UBE3BQ7Z3V4 1068 aa4.86□□□□□ -1.63
PABPC1-206ENST00000518293 MRGPRGQ86SM5 289 aa4.86□□□□□ -1.63
PABPC1-206ENST00000518293 RSPH3Q86UC2 560 aa4.86□□□□□ -1.63
PABPC1-206ENST00000518293 PLXDC1Q8IUK5 500 aa4.86□□□□□ -1.63
PABPC1-206ENST00000518293 DNAJC10Q8IXB1 793 aa4.86□□□□□ -1.63
PABPC1-206ENST00000518293 RAVER1Q8IY67 606 aaKnown RBP4.86□□□□□ -1.63
PABPC1-206ENST00000518293 LARP4BQ92615 738 aaKnown RBP4.86□□□□□ -1.63
PABPC1-206ENST00000518293 TMX3Q96JJ7 454 aa4.86□□□□□ -1.63
PABPC1-206ENST00000518293 PHACTR3Q96KR7 559 aa4.86□□□□□ -1.63
PABPC1-206ENST00000518293 RHOBTB2Q9BYZ6 727 aa4.86□□□□□ -1.63
PABPC1-206ENST00000518293 SLC2A4RGQ9NR83 387 aa4.86□□□□□ -1.63
PABPC1-206ENST00000518293 FBXO34Q9NWN3 711 aa4.86□□□□□ -1.63
PABPC1-206ENST00000518293 GPRC5BQ9NZH0 403 aa4.86□□□□□ -1.63
PABPC1-206ENST00000518293 C9orf84Q5VXU9 1444 aa4.86□□□□□ -1.63
PABPC1-206ENST00000518293 TCRBV7S2A1N4TA0A589 114 aa4.85□□□□□ -1.63
PABPC1-206ENST00000518293 TOM1O60784 492 aa4.85□□□□□ -1.63
PABPC1-206ENST00000518293 RECQL4O94761 1208 aa4.85□□□□□ -1.63
PABPC1-206ENST00000518293 PRSS23O95084 383 aa4.85□□□□□ -1.63
PABPC1-206ENST00000518293 PEX11BO96011 259 aa4.85□□□□□ -1.63
PABPC1-206ENST00000518293 POMCP01189 267 aa4.85□□□□□ -1.63
PABPC1-206ENST00000518293 PF4V1P10720 104 aa4.85□□□□□ -1.63
PABPC1-206ENST00000518293 SLC6A2P23975 617 aa4.85□□□□□ -1.63
PABPC1-206ENST00000518293 PIN1Q13526 163 aaPredicted RBP4.85□□□□□ -1.63
PABPC1-206ENST00000518293 DACT2Q5SW24 774 aa4.85□□□□□ -1.63
PABPC1-206ENST00000518293 MED25Q71SY5 747 aa4.85□□□□□ -1.63
PABPC1-206ENST00000518293 GDF7Q7Z4P5 450 aa4.85□□□□□ -1.63
PABPC1-206ENST00000518293 CATIPQ7Z7H3 387 aa4.85□□□□□ -1.63
PABPC1-206ENST00000518293 LDLRAD3Q86YD5 345 aa4.85□□□□□ -1.63
PABPC1-206ENST00000518293 DRC7Q8IY82 874 aa4.85□□□□□ -1.63
PABPC1-206ENST00000518293 ANKRD13AQ8IZ07 590 aa4.85□□□□□ -1.63
PABPC1-206ENST00000518293 ZNF276Q8N554 614 aa4.85□□□□□ -1.63
PABPC1-206ENST00000518293 NSUN6Q8TEA1 469 aaKnown RBP4.85□□□□□ -1.63
PABPC1-206ENST00000518293 ZG16BQ96DA0 208 aa4.85□□□□□ -1.63
PABPC1-206ENST00000518293 CLPTM1LQ96KA5 538 aa4.85□□□□□ -1.63
PABPC1-206ENST00000518293 DCLRE1CQ96SD1 692 aaKnown RBP4.85□□□□□ -1.63
PABPC1-206ENST00000518293 RTFDC1Q9BY42 306 aaPredicted RBP4.85□□□□□ -1.63
PABPC1-206ENST00000518293 TRPM5Q9NZQ8 1165 aa4.85□□□□□ -1.63
PABPC1-206ENST00000518293 ANKRD6Q9Y2G4 727 aa4.85□□□□□ -1.63
PABPC1-206ENST00000518293 CFAP20Q9Y6A4 193 aaKnown RBP4.85□□□□□ -1.63
PABPC1-206ENST00000518293 SCAPERQ9BY12 1400 aa4.85□□□□□ -1.63
PABPC1-206ENST00000518293 HECW1Q76N89 1606 aa4.85□□□□□ -1.63
PABPC1-206ENST00000518293 SUPT6HQ7KZ85 1726 aaKnown RBP4.85□□□□□ -1.63
PABPC1-206ENST00000518293 MYO5CQ9NQX4 1742 aa4.84□□□□□ -1.63
PABPC1-206ENST00000518293 CNTLNQ9NXG0 1405 aa4.84□□□□□ -1.63
PABPC1-206ENST00000518293 TRAPPC8Q9Y2L5 1435 aa4.84□□□□□ -1.63
PABPC1-206ENST00000518293 SBK3P0C264 359 aa4.84□□□□□ -1.63
PABPC1-206ENST00000518293 TGM1P22735 817 aa4.84□□□□□ -1.63
PABPC1-206ENST00000518293 SLC6A4P31645 630 aa4.84□□□□□ -1.63
PABPC1-206ENST00000518293 EPHB1P54762 984 aa4.84□□□□□ -1.63
PABPC1-206ENST00000518293 TLE1Q04724 770 aa4.84□□□□□ -1.63
PABPC1-206ENST00000518293 PDCD4Q53EL6 469 aaKnown RBP4.84□□□□□ -1.63
PABPC1-206ENST00000518293 ODR4Q5SWX8 454 aa4.84□□□□□ -1.63
PABPC1-206ENST00000518293 AGAP9Q5VTM2 703 aa4.84□□□□□ -1.63
PABPC1-206ENST00000518293 PPP4R3AQ6IN85 833 aa4.84□□□□□ -1.63
PABPC1-206ENST00000518293 USP45Q70EL2 814 aa4.84□□□□□ -1.63
PABPC1-206ENST00000518293 SLC25A43Q8WUT9 341 aaPredicted RBP4.84□□□□□ -1.63
PABPC1-206ENST00000518293 JPH3Q8WXH2 748 aaPredicted RBP4.84□□□□□ -1.63
PABPC1-206ENST00000518293 CLIP3Q96DZ5 547 aa4.84□□□□□ -1.63
PABPC1-206ENST00000518293 CRAMP1Q96RY5 1269 aa4.84□□□□□ -1.63
PABPC1-206ENST00000518293 PRRX2Q99811 253 aa4.84□□□□□ -1.63
PABPC1-206ENST00000518293 VRK1Q99986 396 aaPredicted RBP4.84□□□□□ -1.63
PABPC1-206ENST00000518293 GTPBP4Q9BZE4 634 aaKnown RBP4.84□□□□□ -1.63
PABPC1-206ENST00000518293 C11orf54Q9H0W9 315 aaPredicted RBP4.84□□□□□ -1.63
PABPC1-206ENST00000518293 GSTO2Q9H4Y5 243 aa4.84□□□□□ -1.63
PABPC1-206ENST00000518293 USP15Q9Y4E8 981 aaPredicted RBP4.84□□□□□ -1.63
PABPC1-206ENST00000518293 C3P01024 1663 aa4.83□□□□□ -1.64
PABPC1-206ENST00000518293 SAMD9Q5K651 1589 aa4.83□□□□□ -1.64
PABPC1-206ENST00000518293 ZNF518AQ6AHZ1 1483 aa4.83□□□□□ -1.64
PABPC1-206ENST00000518293 LRRC14BA6NHZ5 514 aa4.83□□□□□ -1.64
PABPC1-206ENST00000518293 DIRC3C9JPN6 131 aa4.83□□□□□ -1.64
PABPC1-206ENST00000518293 KIAA0391O15091 583 aaKnown RBP4.83□□□□□ -1.64
PABPC1-206ENST00000518293 GRM6O15303 877 aa4.83□□□□□ -1.64
PABPC1-206ENST00000518293 RAMP2O60895 175 aa4.83□□□□□ -1.64
PABPC1-206ENST00000518293 RPS6KA4O75676 772 aa4.83□□□□□ -1.64
PABPC1-206ENST00000518293 ITGB1P05556 798 aa4.83□□□□□ -1.64
PABPC1-206ENST00000518293 AKAP5P24588 427 aa4.83□□□□□ -1.64
PABPC1-206ENST00000518293 CREMQ03060 361 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms