RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 TMA7Q9Y2S6 64 aaKnown RBP6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 WDR81Q562E7 1941 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 CEP290O15078 2479 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 A0A096LPE4 126 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 FAM237AA0A1B0GTK4 181 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 A0A1W2PPZ6 126 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 METTL12A8MUP2 240 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 H0YCG3 227 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 GOLGA6L22H0YM25 854 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 DLL1O00548 723 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 ACKR2O00590 384 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 EFCAB14O75071 495 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 PF4P02776 101 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 PRKCBP05771 671 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 CELA3AP09093 270 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 GAP43P17677 238 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 CD33P20138 364 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 ITPKAP23677 461 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 NMT1P30419 496 aaKnown RBP6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 LIG3P49916 1009 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 EFNA5P52803 228 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 UBE2HP62256 183 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 MBTD1Q05BQ5 628 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 STRN3Q13033 797 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 MAPK7Q13164 816 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 PRPF4BQ13523 1007 aaKnown RBP6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 CUL4BQ13620 913 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 PCBP1Q15365 356 aaKnown RBP eCLIP6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 PKDCCQ504Y2 493 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 TWF2Q6IBS0 349 aaKnown RBP6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 KANK3Q6NY19 840 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 KRBA2Q6ZNG9 492 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 TMCO2Q7Z6W1 182 aaPredicted RBP6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 CDR2LQ86X02 465 aaPredicted RBP6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 DAW1Q8N136 415 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 RNF169Q8NCN4 708 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 NXPE3Q969Y0 559 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 DNAJC19Q96DA6 116 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 ABHD17AQ96GS6 310 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 CPB2Q96IY4 423 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 RHOVQ96L33 236 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 HHIPQ96QV1 700 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 NTPCRQ9BSD7 190 aaKnown RBP6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 TCHPQ9BT92 498 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 NT5C1AQ9BXI3 368 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 TRIM9Q9C026 710 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 TMX1Q9H3N1 280 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 FZD8Q9H461 694 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 MRPL44Q9H9J2 332 aaKnown RBP6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 MAGEF1Q9HAY2 307 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 RGS18Q9NS28 235 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 DACT1Q9NYF0 836 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 PIN4Q9Y237 131 aaKnown RBP6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 PCDHB7Q9Y5E2 793 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 TCHHQ07283 1943 aa6.36□□□□□ -1.39
SCARNA6.1-201ENST00000516989 A0A1B0GUA9 196 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 J3QW42 95 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 K7ENM7 598 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 B4GALT5O43286 388 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 MGEA5O60502 916 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 GREM1O60565 184 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 KINO60870 393 aaKnown RBP6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 GCNT3O95395 438 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 STAG3L1P0CL83 205 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 ATP2A2P16615 1042 aaKnown RBP6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 ARF4P18085 180 aaPredicted RBP6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 GARTP22102 1010 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 AXLP30530 894 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 HOXA11P31270 313 aaPredicted RBP6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 ZNF131P52739 623 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 RABGGTBP53611 331 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 NRLP54845 237 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 WDR5P61964 334 aaKnown RBP6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 DEFB103AP81534 67 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 CAMK2GQ13555 558 aaPredicted RBP6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 SNW1Q13573 536 aaKnown RBP6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 BMS1Q14692 1282 aaKnown RBP6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 NT5DC1Q5TFE4 455 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 CDCA2Q69YH5 1023 aaPredicted RBP6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 NOTUMQ6P988 496 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 CLEC17AQ6ZS10 378 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 UNC13DQ70J99 1090 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 SLC24A5Q71RS6 500 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 ZNF720Q7Z2F6 126 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 HAUS6Q7Z4H7 955 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 SFR1Q86XK3 245 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 FMR1NBQ8N0W7 255 aaPredicted RBP6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 TMEM102Q8N9M5 508 aaPredicted RBP6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 SLC17A8Q8NDX2 589 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 TMEM161BQ8NDZ6 487 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 ENGASEQ8NFI3 743 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 PHOSPHO2Q8TCD6 241 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 HPS3Q969F9 1004 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 TOP1MTQ969P6 601 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 CCDC47Q96A33 483 aaKnown RBP6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 BICD1Q96G01 975 aa6.35□□□□□ -1.39
SCARNA6.1-201ENST00000516989 TIGD1Q96MW7 591 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms