RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 POLR2BP30876 1174 aaKnown RBP8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ATICP31939 592 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 RBP5P82980 135 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 PAK2Q13177 524 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 TRIM71Q2Q1W2 868 aaKnown RBP8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ZNF667Q5HYK9 610 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 FBXO47Q5MNV8 452 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 H2AFVQ71UI9 128 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 NOP9Q86U38 636 aaKnown RBP8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 SLC47A2Q86VL8 602 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 GLYCTKQ8IVS8 523 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 RPUSD2Q8IZ73 545 aaKnown RBP8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 SLC35F6Q8N357 371 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 C1orf127Q8N9H9 656 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 USP38Q8NB14 1042 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 BEST2Q8NFU1 509 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 SLC30A5Q8TAD4 765 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 LNX1Q8TBB1 728 aaPredicted RBP8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 SLC20A1Q8WUM9 679 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 SECISBP2LQ93073 1101 aaKnown RBP8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 FAXDC2Q96IV6 333 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 WDR24Q96S15 920 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 IRX2Q9BZI1 471 aaPredicted RBP8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 XYLT2Q9H1B5 865 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 TRPV6Q9H1D0 765 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 AGO3Q9H9G7 860 aaKnown RBP8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ERVK-5Q9HDB9 667 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 CNTN3Q9P232 1028 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 NXF1Q9UBU9 619 aaKnown RBP8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 PARP2Q9UGN5 583 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 SIX4Q9UIU6 781 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 NOCTQ9UK39 431 aaKnown RBP8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 PADI3Q9ULW8 664 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 UBQLN1Q9UMX0 589 aaKnown RBP8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 NENFQ9UMX5 172 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 AGAP1Q9UPQ3 857 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 HES2Q9Y543 173 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 IPPQ9Y573 584 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 PCDHB2Q9Y5E7 798 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 SQORQ9Y6N5 450 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 DNAH12Q6ZR08 3092 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 UMODL1Q5DID0 1318 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 TDRD15B5MCY1 1934 aaKnown RBP8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 MACROD2A1Z1Q3 448 aa8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 TLR3O15455 904 aaKnown RBP8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 TACC1O75410 805 aa8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 STAU1O95793 577 aaKnown RBP8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 CD4P01730 458 aa8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 GHRP10912 638 aa8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 CKBP12277 381 aa8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 CHRNB2P17787 502 aa8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 AKAP5P24588 427 aa8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 CD52P31358 61 aa8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 C1QTNF8P60827 252 aa8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 CDR2Q01850 454 aa8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 MYO1EQ12965 1108 aa8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 LPIN1Q14693 890 aa8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 MTFR1Q15390 333 aa8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ZBTB6Q15916 424 aa8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ZNF618Q5T7W0 954 aa8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 TAF3Q5VWG9 929 aa8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 SCARA3Q6AZY7 606 aa8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 TMEM270Q6UE05 265 aa8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ALKAL1Q6UXT8 129 aa8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ZNF677Q86XU0 584 aa8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 RNF10Q8N5U6 811 aaKnown RBP8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 UBR7Q8N806 425 aa8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 RBBP8NLQ8NC74 664 aaPredicted RBP8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 SMG8Q8ND04 991 aaKnown RBP8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 OLIG1Q8TAK6 271 aa8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 HPDLQ96IR7 371 aa8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ZMAT2Q96NC0 199 aaKnown RBP8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 PACSIN1Q9BY11 444 aa8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 RNF208Q9H0X6 261 aa8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 VRTNQ9H8Y1 702 aa8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 FAM105AQ9NUU6 356 aa8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 KLK14Q9P0G3 267 aa8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 OGDHLQ9ULD0 1010 aa8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 INTUQ9ULD6 942 aa8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 CNTN6Q9UQ52 1028 aa8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 DUSP10Q9Y6W6 482 aa8.18□□□□□ -1.1
SCARNA20.1-201ENST00000516009 CTAGE9A4FU28 777 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 BTNL10A8MVZ5 291 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 TMCO5BA8MYB1 307 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 RTN2O75298 545 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 URI1O94763 535 aaPredicted RBP8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 MMEP08473 750 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 WEE2P0C1S8 567 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 TMEM253P0C7T8 217 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 GZMAP12544 262 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ITGA4P13612 1032 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 KCNE1P15382 129 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 CD58P19256 250 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 GNA15P30679 374 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ASPAP45381 313 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 RAB27AP51159 221 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 GUCY2FP51841 1108 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ZNF132P52740 706 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 GALCP54803 685 aa8.17□□□□□ -1.1
SCARNA20.1-201ENST00000516009 NAP1L1P55209 391 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms