RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 IGLV2-14P01704 120 aa4.27□□□□□ -1.73
HERC4-215ENST00000515753 ALAS1P13196 640 aa4.27□□□□□ -1.73
HERC4-215ENST00000515753 FPR1P21462 350 aa4.27□□□□□ -1.73
HERC4-215ENST00000515753 EDNRBP24530 442 aa4.27□□□□□ -1.73
HERC4-215ENST00000515753 FXR1P51114 621 aaKnown RBP eCLIP4.27□□□□□ -1.73
HERC4-215ENST00000515753 NEK2P51955 445 aa4.27□□□□□ -1.73
HERC4-215ENST00000515753 ELLP55199 621 aaPredicted RBP4.27□□□□□ -1.73
HERC4-215ENST00000515753 ANAPC15P60006 121 aa4.27□□□□□ -1.73
HERC4-215ENST00000515753 CTXN1P60606 82 aa4.27□□□□□ -1.73
HERC4-215ENST00000515753 RAB39AQ14964 217 aa4.27□□□□□ -1.73
HERC4-215ENST00000515753 ACAP2Q15057 778 aa4.27□□□□□ -1.73
HERC4-215ENST00000515753 EFCAB2Q5VUJ9 269 aa4.27□□□□□ -1.73
HERC4-215ENST00000515753 ARMC6Q6NXE6 501 aa4.27□□□□□ -1.73
HERC4-215ENST00000515753 GPR149Q86SP6 731 aa4.27□□□□□ -1.73
HERC4-215ENST00000515753 ARHGEF25Q86VW2 580 aa4.27□□□□□ -1.73
HERC4-215ENST00000515753 ZGPATQ8N5A5 531 aaKnown RBP4.27□□□□□ -1.73
HERC4-215ENST00000515753 CAGE1Q8TC20 777 aa4.27□□□□□ -1.73
HERC4-215ENST00000515753 NSUN6Q8TEA1 469 aaKnown RBP4.27□□□□□ -1.73
HERC4-215ENST00000515753 ZNF384Q8TF68 577 aa4.27□□□□□ -1.73
HERC4-215ENST00000515753 STAG1Q8WVM7 1258 aa4.27□□□□□ -1.73
HERC4-215ENST00000515753 Q96MF0 132 aa4.27□□□□□ -1.73
HERC4-215ENST00000515753 NUP88Q99567 741 aaPredicted RBP4.27□□□□□ -1.73
HERC4-215ENST00000515753 CALCOCO1Q9P1Z2 691 aa4.27□□□□□ -1.73
HERC4-215ENST00000515753 SLC23A1Q9UHI7 598 aa4.27□□□□□ -1.73
HERC4-215ENST00000515753 SETD1BQ9UPS6 1966 aaKnown RBP4.26□□□□□ -1.73
HERC4-215ENST00000515753 MYADML2A6NDP7 307 aa4.26□□□□□ -1.73
HERC4-215ENST00000515753 MGST3O14880 152 aa4.26□□□□□ -1.73
HERC4-215ENST00000515753 MATN4O95460 622 aa4.26□□□□□ -1.73
HERC4-215ENST00000515753 C1RP00736 705 aa4.26□□□□□ -1.73
HERC4-215ENST00000515753 CFIP05156 583 aa4.26□□□□□ -1.73
HERC4-215ENST00000515753 ELANEP08246 267 aa4.26□□□□□ -1.73
HERC4-215ENST00000515753 DDCP20711 480 aa4.26□□□□□ -1.73
HERC4-215ENST00000515753 GCSHP23434 173 aa4.26□□□□□ -1.73
HERC4-215ENST00000515753 SCAPQ12770 1279 aa4.26□□□□□ -1.73
HERC4-215ENST00000515753 TARDBPQ13148 414 aaKnown RBP eCLIP4.26□□□□□ -1.73
HERC4-215ENST00000515753 ATP2B3Q16720 1220 aa4.26□□□□□ -1.73
HERC4-215ENST00000515753 PPP4R3AQ6IN85 833 aa4.26□□□□□ -1.73
HERC4-215ENST00000515753 PNMA8AQ86V59 439 aaPredicted RBP4.26□□□□□ -1.73
HERC4-215ENST00000515753 FBXO18Q8NFZ0 1043 aa4.26□□□□□ -1.73
HERC4-215ENST00000515753 OR56A1Q8NGH5 318 aa4.26□□□□□ -1.73
HERC4-215ENST00000515753 IFI44Q8TCB0 444 aa4.26□□□□□ -1.73
HERC4-215ENST00000515753 NELL1Q92832 810 aa4.26□□□□□ -1.73
HERC4-215ENST00000515753 FUBP1Q96AE4 644 aaKnown RBP4.26□□□□□ -1.73
HERC4-215ENST00000515753 MRGPRX4Q96LA9 322 aa4.26□□□□□ -1.73
HERC4-215ENST00000515753 CAMKK2Q96RR4 588 aa4.26□□□□□ -1.73
HERC4-215ENST00000515753 DUSP26Q9BV47 211 aa4.26□□□□□ -1.73
HERC4-215ENST00000515753 CHMP4AQ9BY43 222 aa4.26□□□□□ -1.73
HERC4-215ENST00000515753 DDX56Q9NY93 547 aaKnown RBP4.26□□□□□ -1.73
HERC4-215ENST00000515753 SERPINB13Q9UIV8 391 aa4.26□□□□□ -1.73
HERC4-215ENST00000515753 INTUQ9ULD6 942 aa4.26□□□□□ -1.73
HERC4-215ENST00000515753 LIMCH1Q9UPQ0 1083 aa4.26□□□□□ -1.73
HERC4-215ENST00000515753 ATP11BQ9Y2G3 1177 aa4.26□□□□□ -1.73
HERC4-215ENST00000515753 ACTL7AQ9Y615 435 aa4.26□□□□□ -1.73
HERC4-215ENST00000515753 MAST3O60307 1309 aa4.25□□□□□ -1.73
HERC4-215ENST00000515753 MYBBP1AQ9BQG0 1328 aaKnown RBP4.25□□□□□ -1.73
HERC4-215ENST00000515753 E2F8A0AVK6 867 aa4.25□□□□□ -1.73
HERC4-215ENST00000515753 FOSP01100 380 aaPredicted RBP4.25□□□□□ -1.73
HERC4-215ENST00000515753 POMCP01189 267 aa4.25□□□□□ -1.73
HERC4-215ENST00000515753 RPLP2P05387 115 aaKnown RBP4.25□□□□□ -1.73
HERC4-215ENST00000515753 PDGFRBP09619 1106 aa4.25□□□□□ -1.73
HERC4-215ENST00000515753 RAP2AP10114 183 aa4.25□□□□□ -1.73
HERC4-215ENST00000515753 VCAM1P19320 739 aa4.25□□□□□ -1.73
HERC4-215ENST00000515753 FDXRP22570 491 aa4.25□□□□□ -1.73
HERC4-215ENST00000515753 IGBP1P78318 339 aa4.25□□□□□ -1.73
HERC4-215ENST00000515753 BLOC1S1P78537 153 aa4.25□□□□□ -1.73
HERC4-215ENST00000515753 SIM1P81133 766 aaPredicted RBP4.25□□□□□ -1.73
HERC4-215ENST00000515753 KIF23Q02241 960 aaPredicted RBP4.25□□□□□ -1.73
HERC4-215ENST00000515753 ODF1Q14990 250 aa4.25□□□□□ -1.73
HERC4-215ENST00000515753 C3orf36Q3SXR2 165 aa4.25□□□□□ -1.73
HERC4-215ENST00000515753 TSHZ3Q63HK5 1081 aa4.25□□□□□ -1.73
HERC4-215ENST00000515753 ZBTB46Q86UZ6 589 aa4.25□□□□□ -1.73
HERC4-215ENST00000515753 MAPKAPK5Q8IW41 473 aa4.25□□□□□ -1.73
HERC4-215ENST00000515753 CPA6Q8N4T0 437 aa4.25□□□□□ -1.73
HERC4-215ENST00000515753 DCBLD1Q8N8Z6 715 aa4.25□□□□□ -1.73
HERC4-215ENST00000515753 DPF2Q92785 391 aa4.25□□□□□ -1.73
HERC4-215ENST00000515753 SMAD5Q99717 465 aaKnown RBP4.25□□□□□ -1.73
HERC4-215ENST00000515753 ZSWIM1Q9BR11 485 aa4.25□□□□□ -1.73
HERC4-215ENST00000515753 ALOXE3Q9BYJ1 711 aa4.25□□□□□ -1.73
HERC4-215ENST00000515753 C11orf54Q9H0W9 315 aaPredicted RBP4.25□□□□□ -1.73
HERC4-215ENST00000515753 LDAHQ9H6V9 325 aa4.25□□□□□ -1.73
HERC4-215ENST00000515753 TDP1Q9NUW8 608 aa4.25□□□□□ -1.73
HERC4-215ENST00000515753 CCDC154A6NI56 674 aa4.24□□□□□ -1.73
HERC4-215ENST00000515753 LRRC3CA6NJW4 275 aa4.24□□□□□ -1.73
HERC4-215ENST00000515753 KRTAP29-1A8MX34 341 aaPredicted RBP4.24□□□□□ -1.73
HERC4-215ENST00000515753 DTNBO60941 627 aa4.24□□□□□ -1.73
HERC4-215ENST00000515753 HAUS5O94927 633 aa4.24□□□□□ -1.73
HERC4-215ENST00000515753 ABLIM3O94929 683 aa4.24□□□□□ -1.73
HERC4-215ENST00000515753 SNUPNO95149 360 aaKnown RBP4.24□□□□□ -1.73
HERC4-215ENST00000515753 RAP2BP61225 183 aa4.24□□□□□ -1.73
HERC4-215ENST00000515753 MXRA7P84157 204 aa4.24□□□□□ -1.73
HERC4-215ENST00000515753 TLE1Q04724 770 aa4.24□□□□□ -1.73
HERC4-215ENST00000515753 ZNF169Q14929 603 aaPredicted RBP4.24□□□□□ -1.73
HERC4-215ENST00000515753 UBXN2BQ14CS0 331 aa4.24□□□□□ -1.73
HERC4-215ENST00000515753 B3GNTL1Q67FW5 361 aaPredicted RBP4.24□□□□□ -1.73
HERC4-215ENST00000515753 ZNF529Q6P280 563 aa4.24□□□□□ -1.73
HERC4-215ENST00000515753 MED25Q71SY5 747 aa4.24□□□□□ -1.73
HERC4-215ENST00000515753 RHOT1Q8IXI2 618 aa4.24□□□□□ -1.73
HERC4-215ENST00000515753 TMEM132CQ8N3T6 1108 aa4.24□□□□□ -1.73
HERC4-215ENST00000515753 PRR18Q8N4B5 295 aa4.24□□□□□ -1.73
HERC4-215ENST00000515753 PPM1NQ8N819 430 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms