RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 MYBPHLA2RUH7 354 aa11.57□□□□□ -0.56
CLDND1-231ENST00000515620 CHADO15335 359 aa11.57□□□□□ -0.56
CLDND1-231ENST00000515620 USO1O60763 962 aaKnown RBP11.57□□□□□ -0.56
CLDND1-231ENST00000515620 ATF2P15336 505 aa11.57□□□□□ -0.56
CLDND1-231ENST00000515620 RBM25P49756 843 aaKnown RBP11.57□□□□□ -0.56
CLDND1-231ENST00000515620 CCT2P78371 535 aaKnown RBP11.57□□□□□ -0.56
CLDND1-231ENST00000515620 TWF1Q12792 350 aa11.57□□□□□ -0.56
CLDND1-231ENST00000515620 CCINQ13939 588 aa11.57□□□□□ -0.56
CLDND1-231ENST00000515620 NPY5RQ15761 445 aa11.57□□□□□ -0.56
CLDND1-231ENST00000515620 UPP1Q16831 310 aa11.57□□□□□ -0.56
CLDND1-231ENST00000515620 PPP4R3AQ6IN85 833 aa11.57□□□□□ -0.56
CLDND1-231ENST00000515620 LRSAM1Q6UWE0 723 aa11.57□□□□□ -0.56
CLDND1-231ENST00000515620 CD300LGQ6UXG3 332 aa11.57□□□□□ -0.56
CLDND1-231ENST00000515620 MAEAQ7L5Y9 396 aa11.57□□□□□ -0.56
CLDND1-231ENST00000515620 KRT25Q7Z3Z0 450 aa11.57□□□□□ -0.56
CLDND1-231ENST00000515620 TRIM22Q8IYM9 498 aa11.57□□□□□ -0.56
CLDND1-231ENST00000515620 DAGLBQ8NCG7 672 aa11.57□□□□□ -0.56
CLDND1-231ENST00000515620 HAS1Q92839 578 aa11.57□□□□□ -0.56
CLDND1-231ENST00000515620 PPP1R10Q96QC0 940 aaKnown RBP11.57□□□□□ -0.56
CLDND1-231ENST00000515620 ADPGKQ9BRR6 497 aa11.57□□□□□ -0.56
CLDND1-231ENST00000515620 GPRC5CQ9NQ84 441 aa11.57□□□□□ -0.56
CLDND1-231ENST00000515620 PRMT7Q9NVM4 692 aaPredicted RBP11.57□□□□□ -0.56
CLDND1-231ENST00000515620 CEP72Q9P209 647 aa11.57□□□□□ -0.56
CLDND1-231ENST00000515620 WASF3Q9UPY6 502 aa11.57□□□□□ -0.56
CLDND1-231ENST00000515620 USP20Q9Y2K6 914 aa11.57□□□□□ -0.56
CLDND1-231ENST00000515620 C4orf47A7E2U8 309 aa11.56□□□□□ -0.56
CLDND1-231ENST00000515620 CCNT1O60563 726 aaKnown RBP11.56□□□□□ -0.56
CLDND1-231ENST00000515620 SLITRK3O94933 977 aa11.56□□□□□ -0.56
CLDND1-231ENST00000515620 GCFC2P16383 781 aaKnown RBP11.56□□□□□ -0.56
CLDND1-231ENST00000515620 LIG1P18858 919 aa11.56□□□□□ -0.56
CLDND1-231ENST00000515620 FCHO2Q0JRZ9 810 aa11.56□□□□□ -0.56
CLDND1-231ENST00000515620 PRPF4BQ13523 1007 aaKnown RBP11.56□□□□□ -0.56
CLDND1-231ENST00000515620 SH3PXD2AQ5TCZ1 1133 aa11.56□□□□□ -0.56
CLDND1-231ENST00000515620 PKN3Q6P5Z2 889 aa11.56□□□□□ -0.56
CLDND1-231ENST00000515620 RALGPS2Q86X27 583 aaPredicted RBP11.56□□□□□ -0.56
CLDND1-231ENST00000515620 GPIHBP1Q8IV16 184 aa11.56□□□□□ -0.56
CLDND1-231ENST00000515620 ZBTB8OSQ8IWT0 167 aa11.56□□□□□ -0.56
CLDND1-231ENST00000515620 LEMD2Q8NC56 503 aa11.56□□□□□ -0.56
CLDND1-231ENST00000515620 SHKBP1Q8TBC3 707 aa11.56□□□□□ -0.56
CLDND1-231ENST00000515620 GATA6Q92908 595 aa11.56□□□□□ -0.56
CLDND1-231ENST00000515620 COL26A1Q96A83 441 aa11.56□□□□□ -0.56
CLDND1-231ENST00000515620 E2F7Q96AV8 911 aa11.56□□□□□ -0.56
CLDND1-231ENST00000515620 ZFYVE19Q96K21 471 aa11.56□□□□□ -0.56
CLDND1-231ENST00000515620 ZNF512Q96ME7 567 aaPredicted RBP11.56□□□□□ -0.56
CLDND1-231ENST00000515620 UROC1Q96N76 676 aa11.56□□□□□ -0.56
CLDND1-231ENST00000515620 SCNM1Q9BWG6 230 aa11.56□□□□□ -0.56
CLDND1-231ENST00000515620 GTSE1Q9NYZ3 720 aa11.56□□□□□ -0.56
CLDND1-231ENST00000515620 SPAG17Q6Q759 2223 aa11.55□□□□□ -0.56
CLDND1-231ENST00000515620 CCDC194A0A1B0GVG4 234 aa11.55□□□□□ -0.56
CLDND1-231ENST00000515620 RARRES1P49788 294 aa11.55□□□□□ -0.56
CLDND1-231ENST00000515620 EPHA5P54756 1037 aa11.55□□□□□ -0.56
CLDND1-231ENST00000515620 SSRP1Q08945 709 aaKnown RBP11.55□□□□□ -0.56
CLDND1-231ENST00000515620 FAM187BQ17R55 369 aa11.55□□□□□ -0.56
CLDND1-231ENST00000515620 CTXN3Q4LDR2 81 aa11.55□□□□□ -0.56
CLDND1-231ENST00000515620 STXBP5Q5T5C0 1151 aa11.55□□□□□ -0.56
CLDND1-231ENST00000515620 DAB2IPQ5VWQ8 1189 aa11.55□□□□□ -0.56
CLDND1-231ENST00000515620 EEF1DP3Q658K8 133 aa11.55□□□□□ -0.56
CLDND1-231ENST00000515620 CDCA2Q69YH5 1023 aaPredicted RBP11.55□□□□□ -0.56
CLDND1-231ENST00000515620 NEK8Q86SG6 692 aa11.55□□□□□ -0.56
CLDND1-231ENST00000515620 SYNPOQ8N3V7 929 aa11.55□□□□□ -0.56
CLDND1-231ENST00000515620 PIGOQ8TEQ8 1089 aa11.55□□□□□ -0.56
CLDND1-231ENST00000515620 JAKMIP1Q96N16 626 aaKnown RBP11.55□□□□□ -0.56
CLDND1-231ENST00000515620 AIFM3Q96NN9 605 aa11.55□□□□□ -0.56
CLDND1-231ENST00000515620 EIF2AK1Q9BQI3 630 aaKnown RBP11.55□□□□□ -0.56
CLDND1-231ENST00000515620 FZD8Q9H461 694 aa11.55□□□□□ -0.56
CLDND1-231ENST00000515620 ANKEF1Q9NU02 776 aa11.55□□□□□ -0.56
CLDND1-231ENST00000515620 FBXL5Q9UKA1 691 aa11.55□□□□□ -0.56
CLDND1-231ENST00000515620 AKAP13Q12802 2813 aa11.54□□□□□ -0.56
CLDND1-231ENST00000515620 A0A087WWV3 80 aa11.54□□□□□ -0.56
CLDND1-231ENST00000515620 CCDC163A0A0D9SF12 145 aa11.54□□□□□ -0.56
CLDND1-231ENST00000515620 A0A1W2PRU2 124 aa11.54□□□□□ -0.56
CLDND1-231ENST00000515620 H7C4K7 107 aa11.54□□□□□ -0.56
CLDND1-231ENST00000515620 AKAP3O75969 853 aa11.54□□□□□ -0.56
CLDND1-231ENST00000515620 DEXIO95424 95 aa11.54□□□□□ -0.56
CLDND1-231ENST00000515620 EDN1P05305 212 aa11.54□□□□□ -0.56
CLDND1-231ENST00000515620 PDIA3P30101 505 aaKnown RBP11.54□□□□□ -0.56
CLDND1-231ENST00000515620 CREB5Q02930 508 aa11.54□□□□□ -0.56
CLDND1-231ENST00000515620 SOX4Q06945 474 aaPredicted RBP11.54□□□□□ -0.56
CLDND1-231ENST00000515620 TNK2Q07912 1038 aa11.54□□□□□ -0.56
CLDND1-231ENST00000515620 MAPK6Q16659 721 aa11.54□□□□□ -0.56
CLDND1-231ENST00000515620 PLK5Q496M5 336 aa11.54□□□□□ -0.56
CLDND1-231ENST00000515620 TPGS2Q68CL5 300 aa11.54□□□□□ -0.56
CLDND1-231ENST00000515620 GALNT17Q6IS24 598 aa11.54□□□□□ -0.56
CLDND1-231ENST00000515620 KIAA1211LQ6NV74 962 aa11.54□□□□□ -0.56
CLDND1-231ENST00000515620 BLOC1S2Q6QNY1 142 aa11.54□□□□□ -0.56
CLDND1-231ENST00000515620 HAUS6Q7Z4H7 955 aa11.54□□□□□ -0.56
CLDND1-231ENST00000515620 ZC3H10Q96K80 434 aaKnown RBP11.54□□□□□ -0.56
CLDND1-231ENST00000515620 GPR88Q9GZN0 384 aa11.54□□□□□ -0.56
CLDND1-231ENST00000515620 KCNJ14Q9UNX9 436 aa11.54□□□□□ -0.56
CLDND1-231ENST00000515620 SLC8A2Q9UPR5 921 aa11.54□□□□□ -0.56
CLDND1-231ENST00000515620 YIPF1Q9Y548 306 aa11.54□□□□□ -0.56
CLDND1-231ENST00000515620 SETXQ7Z333 2677 aaKnown RBP11.53□□□□□ -0.56
CLDND1-231ENST00000515620 LNP1A1A4G5 178 aa11.53□□□□□ -0.56
CLDND1-231ENST00000515620 PODXLO00592 558 aa11.53□□□□□ -0.56
CLDND1-231ENST00000515620 DPYSL4O14531 572 aa11.53□□□□□ -0.56
CLDND1-231ENST00000515620 SYN3O14994 580 aa11.53□□□□□ -0.56
CLDND1-231ENST00000515620 LYPLA2O95372 231 aa11.53□□□□□ -0.56
CLDND1-231ENST00000515620 CAVIN2O95810 425 aa11.53□□□□□ -0.56
CLDND1-231ENST00000515620 CPB1P15086 417 aa11.53□□□□□ -0.56
CLDND1-231ENST00000515620 ELF2Q15723 593 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms