RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 MTUS1Q9ULD2 1270 aa8.75□□□□□ -1.01
CPNE4-211ENST00000514439 SNX24Q9Y343 169 aa8.75□□□□□ -1.01
CPNE4-211ENST00000514439 MYO1FO00160 1098 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 THAP12O43422 761 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 ASS1P00966 412 aaKnown RBP8.74□□□□□ -1.01
CPNE4-211ENST00000514439 CST3P01034 146 aaPredicted RBP8.74□□□□□ -1.01
CPNE4-211ENST00000514439 RARAP10276 462 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 TXNP10599 105 aaKnown RBP8.74□□□□□ -1.01
CPNE4-211ENST00000514439 YBX3P16989 372 aaKnown RBP eCLIP8.74□□□□□ -1.01
CPNE4-211ENST00000514439 EPHX2P34913 555 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 GJA5P36382 358 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 COILP38432 576 aaPredicted RBP8.74□□□□□ -1.01
CPNE4-211ENST00000514439 ZNF132P52740 706 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 AP3M2P53677 418 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 MYL6P60660 151 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 SKOR1P84550 965 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 ZNF844Q08AG5 666 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 LLGL1Q15334 1064 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 LIN9Q5TKA1 542 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 ZDHHC24Q6UX98 284 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 EFCAB13Q8IY85 973 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 EXOC8Q8IYI6 725 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 UBR7Q8N806 425 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 C1orf131Q8NDD1 294 aaKnown RBP8.74□□□□□ -1.01
CPNE4-211ENST00000514439 UPF1Q92900 1129 aaKnown RBP eCLIP8.74□□□□□ -1.01
CPNE4-211ENST00000514439 ZBTB10Q96DT7 871 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 NLRP4Q96MN2 994 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 C2orf40Q9H1Z8 148 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 MROH8Q9H579 483 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 TMBIM4Q9HC24 238 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 ADAM22Q9P0K1 906 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 CPSF3Q9UKF6 684 aaKnown RBP8.74□□□□□ -1.01
CPNE4-211ENST00000514439 GRIN2DO15399 1336 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 GOLGA6L10A6NI86 522 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 HMGB1P1B2RPK0 211 aaPredicted RBP8.74□□□□□ -1.01
CPNE4-211ENST00000514439 B4GALT5O43286 388 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 PPFIA2O75334 1257 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 IVLP07476 585 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 MYZAPP0CAP1 466 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 CYP2C8P10632 490 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 PROZP22891 400 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 SLC1A1P43005 524 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 RPL21P46778 160 aaKnown RBP8.74□□□□□ -1.01
CPNE4-211ENST00000514439 SLC26A2P50443 739 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 IRAK1P51617 712 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 CLCN3P51790 818 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 DRG2P55039 364 aaKnown RBP8.74□□□□□ -1.01
CPNE4-211ENST00000514439 PLTPP55058 493 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 TTLL4Q14679 1199 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 FOXR1Q6PIV2 292 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 MMS22LQ6ZRQ5 1243 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 ARMC9Q7Z3E5 817 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 PHF13Q86YI8 300 aaPredicted RBP8.74□□□□□ -1.01
CPNE4-211ENST00000514439 CCDC105Q8IYK2 499 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 C12orf50Q8NA57 414 aaPredicted RBP8.74□□□□□ -1.01
CPNE4-211ENST00000514439 ZC3H15Q8WU90 426 aaKnown RBP8.74□□□□□ -1.01
CPNE4-211ENST00000514439 L3MBTL3Q96JM7 780 aaPredicted RBP8.74□□□□□ -1.01
CPNE4-211ENST00000514439 JPH2Q9BR39 696 aaPredicted RBP8.74□□□□□ -1.01
CPNE4-211ENST00000514439 PLVAPQ9BX97 442 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 TXLNGYQ9BZA5 131 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 SMARCAD1Q9H4L7 1026 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 EFCC1Q9HA90 598 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 GRHL1Q9NZI5 618 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 CWC15Q9P013 229 aaKnown RBP8.74□□□□□ -1.01
CPNE4-211ENST00000514439 ATP8A1Q9Y2Q0 1164 aa8.74□□□□□ -1.01
CPNE4-211ENST00000514439 INO80B-WBP1J3KQ70 363 aa8.73□□□□□ -1.01
CPNE4-211ENST00000514439 PODXLO00592 558 aa8.73□□□□□ -1.01
CPNE4-211ENST00000514439 FSCN2O14926 492 aa8.73□□□□□ -1.01
CPNE4-211ENST00000514439 HBP1O60381 514 aa8.73□□□□□ -1.01
CPNE4-211ENST00000514439 PROSCO94903 275 aa8.73□□□□□ -1.01
CPNE4-211ENST00000514439 HOXC6P09630 235 aa8.73□□□□□ -1.01
CPNE4-211ENST00000514439 POTEJP0CG39 1038 aa8.73□□□□□ -1.01
CPNE4-211ENST00000514439 NR1D1P20393 614 aa8.73□□□□□ -1.01
CPNE4-211ENST00000514439 FNTAP49354 379 aa8.73□□□□□ -1.01
CPNE4-211ENST00000514439 ATP1A2P50993 1020 aa8.73□□□□□ -1.01
CPNE4-211ENST00000514439 GNGT1P63211 74 aa8.73□□□□□ -1.01
CPNE4-211ENST00000514439 PTP4A2Q12974 167 aa8.73□□□□□ -1.01
CPNE4-211ENST00000514439 SNAPC2Q13487 334 aa8.73□□□□□ -1.01
CPNE4-211ENST00000514439 MAMLD1Q13495 774 aa8.73□□□□□ -1.01
CPNE4-211ENST00000514439 TFDP1Q14186 410 aa8.73□□□□□ -1.01
CPNE4-211ENST00000514439 DUOXA2Q1HG44 320 aa8.73□□□□□ -1.01
CPNE4-211ENST00000514439 ZNF568Q3ZCX4 644 aa8.73□□□□□ -1.01
CPNE4-211ENST00000514439 ATF7IP2Q5U623 682 aa8.73□□□□□ -1.01
CPNE4-211ENST00000514439 DAB2IPQ5VWQ8 1189 aa8.73□□□□□ -1.01
CPNE4-211ENST00000514439 TTC19Q6DKK2 380 aaPredicted RBP8.73□□□□□ -1.01
CPNE4-211ENST00000514439 DPY19L2Q6NUT2 758 aa8.73□□□□□ -1.01
CPNE4-211ENST00000514439 MPZL3Q6UWV2 235 aa8.73□□□□□ -1.01
CPNE4-211ENST00000514439 KDM7AQ6ZMT4 941 aa8.73□□□□□ -1.01
CPNE4-211ENST00000514439 TSHZ1Q6ZSZ6 1077 aa8.73□□□□□ -1.01
CPNE4-211ENST00000514439 CDR2LQ86X02 465 aaPredicted RBP8.73□□□□□ -1.01
CPNE4-211ENST00000514439 THNSL1Q8IYQ7 743 aa8.73□□□□□ -1.01
CPNE4-211ENST00000514439 CEP120Q8N960 986 aa8.73□□□□□ -1.01
CPNE4-211ENST00000514439 FBXO25Q8TCJ0 367 aa8.73□□□□□ -1.01
CPNE4-211ENST00000514439 DDX27Q96GQ7 796 aaKnown RBP8.73□□□□□ -1.01
CPNE4-211ENST00000514439 VCPIP1Q96JH7 1222 aa8.73□□□□□ -1.01
CPNE4-211ENST00000514439 RUNDC3BQ96NL0 473 aa8.73□□□□□ -1.01
CPNE4-211ENST00000514439 INO80BQ9C086 356 aaPredicted RBP8.73□□□□□ -1.01
CPNE4-211ENST00000514439 NIF3L1Q9GZT8 377 aa8.73□□□□□ -1.01
CPNE4-211ENST00000514439 CENPHQ9H3R5 247 aa8.73□□□□□ -1.01
CPNE4-211ENST00000514439 PTPRHQ9HD43 1115 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms