RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 LMBRD2Q68DH5 695 aaPredicted RBP8.56□□□□□ -1.04
CLDND1-229ENST00000513988 HIST2H2BCQ6DN03 193 aa8.56□□□□□ -1.04
CLDND1-229ENST00000513988 ANO7Q6IWH7 933 aa8.56□□□□□ -1.04
CLDND1-229ENST00000513988 TRMT1LQ7Z2T5 733 aaKnown RBP8.56□□□□□ -1.04
CLDND1-229ENST00000513988 MRPL10Q7Z7H8 261 aaKnown RBP8.56□□□□□ -1.04
CLDND1-229ENST00000513988 DGKHQ86XP1 1220 aa8.56□□□□□ -1.04
CLDND1-229ENST00000513988 CEP57Q86XR8 500 aa8.56□□□□□ -1.04
CLDND1-229ENST00000513988 TMC8Q8IU68 726 aa8.56□□□□□ -1.04
CLDND1-229ENST00000513988 RPLP0P6Q8NHW5 317 aa8.56□□□□□ -1.04
CLDND1-229ENST00000513988 SETD7Q8WTS6 366 aaKnown RBP8.56□□□□□ -1.04
CLDND1-229ENST00000513988 TTC9Q92623 222 aa8.56□□□□□ -1.04
CLDND1-229ENST00000513988 RSPRY1Q96DX4 576 aa8.56□□□□□ -1.04
CLDND1-229ENST00000513988 ZFYVE19Q96K21 471 aa8.56□□□□□ -1.04
CLDND1-229ENST00000513988 SPACA7Q96KW9 195 aa8.56□□□□□ -1.04
CLDND1-229ENST00000513988 PSMG3-AS1Q96PY0 264 aa8.56□□□□□ -1.04
CLDND1-229ENST00000513988 ZNF302Q9NR11 478 aa8.56□□□□□ -1.04
CLDND1-229ENST00000513988 CEP131Q9UPN4 1083 aa8.56□□□□□ -1.04
CLDND1-229ENST00000513988 UBIAD1Q9Y5Z9 338 aa8.56□□□□□ -1.04
CLDND1-229ENST00000513988 NFASCO94856 1347 aa8.55□□□□□ -1.04
CLDND1-229ENST00000513988 ZFHX3Q15911 3703 aa8.55□□□□□ -1.04
CLDND1-229ENST00000513988 IGKV6D-21A0A0A0MT36 114 aa8.55□□□□□ -1.04
CLDND1-229ENST00000513988 KLRF2D3W0D1 207 aa8.55□□□□□ -1.04
CLDND1-229ENST00000513988 GJB3O75712 270 aa8.55□□□□□ -1.04
CLDND1-229ENST00000513988 DKK1O94907 266 aa8.55□□□□□ -1.04
CLDND1-229ENST00000513988 ATG7O95352 703 aa8.55□□□□□ -1.04
CLDND1-229ENST00000513988 EGFP01133 1207 aa8.55□□□□□ -1.04
CLDND1-229ENST00000513988 ELAVL4P26378 380 aaKnown RBP8.55□□□□□ -1.04
CLDND1-229ENST00000513988 OR1D2P34982 312 aa8.55□□□□□ -1.04
CLDND1-229ENST00000513988 UCNP55089 124 aa8.55□□□□□ -1.04
CLDND1-229ENST00000513988 TNK2Q07912 1038 aa8.55□□□□□ -1.04
CLDND1-229ENST00000513988 SMAD1Q15797 465 aaKnown RBP8.55□□□□□ -1.04
CLDND1-229ENST00000513988 ITPRIPL2Q3MIP1 535 aa8.55□□□□□ -1.04
CLDND1-229ENST00000513988 BROXQ5VW32 411 aa8.55□□□□□ -1.04
CLDND1-229ENST00000513988 USP17L6PQ6QN14 398 aa8.55□□□□□ -1.04
CLDND1-229ENST00000513988 CATSPER4Q7RTX7 472 aa8.55□□□□□ -1.04
CLDND1-229ENST00000513988 CCDC60Q8IWA6 550 aaPredicted RBP8.55□□□□□ -1.04
CLDND1-229ENST00000513988 STAG2Q8N3U4 1231 aa8.55□□□□□ -1.04
CLDND1-229ENST00000513988 LINC01465Q8N7H1 131 aa8.55□□□□□ -1.04
CLDND1-229ENST00000513988 TTC13Q8NBP0 860 aa8.55□□□□□ -1.04
CLDND1-229ENST00000513988 LNX1Q8TBB1 728 aaPredicted RBP8.55□□□□□ -1.04
CLDND1-229ENST00000513988 FRAT1Q92837 279 aaPredicted RBP8.55□□□□□ -1.04
CLDND1-229ENST00000513988 FGF11Q92914 225 aa8.55□□□□□ -1.04
CLDND1-229ENST00000513988 CNOT6LQ96LI5 555 aaKnown RBP8.55□□□□□ -1.04
CLDND1-229ENST00000513988 FZD8Q9H461 694 aa8.55□□□□□ -1.04
CLDND1-229ENST00000513988 PRDM16Q9HAZ2 1276 aa8.55□□□□□ -1.04
CLDND1-229ENST00000513988 UBN1Q9NPG3 1134 aa8.55□□□□□ -1.04
CLDND1-229ENST00000513988 TOR4AQ9NXH8 423 aa8.55□□□□□ -1.04
CLDND1-229ENST00000513988 MAN2B2Q9Y2E5 1009 aa8.55□□□□□ -1.04
CLDND1-229ENST00000513988 PCNX1Q96RV3 2341 aa8.55□□□□□ -1.04
CLDND1-229ENST00000513988 ZMYM6O95789 1325 aa8.54□□□□□ -1.04
CLDND1-229ENST00000513988 ICE1Q9Y2F5 2266 aa8.54□□□□□ -1.04
CLDND1-229ENST00000513988 ARL5CA6NH57 179 aa8.54□□□□□ -1.04
CLDND1-229ENST00000513988 FOXP2O15409 715 aa8.54□□□□□ -1.04
CLDND1-229ENST00000513988 SCNN1GP51170 649 aa8.54□□□□□ -1.04
CLDND1-229ENST00000513988 SPIRE1Q08AE8 756 aa8.54□□□□□ -1.04
CLDND1-229ENST00000513988 FBXO43Q4G163 708 aa8.54□□□□□ -1.04
CLDND1-229ENST00000513988 CCDC157Q569K6 752 aa8.54□□□□□ -1.04
CLDND1-229ENST00000513988 CCDC178Q5BJE1 867 aa8.54□□□□□ -1.04
CLDND1-229ENST00000513988 SPDYCQ5MJ68 293 aa8.54□□□□□ -1.04
CLDND1-229ENST00000513988 FAM171A1Q5VUB5 890 aa8.54□□□□□ -1.04
CLDND1-229ENST00000513988 NYAP1Q6ZVC0 841 aa8.54□□□□□ -1.04
CLDND1-229ENST00000513988 RASSF3Q86WH2 238 aa8.54□□□□□ -1.04
CLDND1-229ENST00000513988 TTC30AQ86WT1 665 aa8.54□□□□□ -1.04
CLDND1-229ENST00000513988 RLN3Q8WXF3 142 aa8.54□□□□□ -1.04
CLDND1-229ENST00000513988 TMEM176AQ96HP8 235 aa8.54□□□□□ -1.04
CLDND1-229ENST00000513988 PNMA5Q96PV4 448 aa8.54□□□□□ -1.04
CLDND1-229ENST00000513988 FNBP1Q96RU3 617 aa8.54□□□□□ -1.04
CLDND1-229ENST00000513988 PIGSQ96S52 555 aa8.54□□□□□ -1.04
CLDND1-229ENST00000513988 LGMNQ99538 433 aa8.54□□□□□ -1.04
CLDND1-229ENST00000513988 CDC6Q99741 560 aa8.54□□□□□ -1.04
CLDND1-229ENST00000513988 INO80BQ9C086 356 aaPredicted RBP8.54□□□□□ -1.04
CLDND1-229ENST00000513988 GPR88Q9GZN0 384 aa8.54□□□□□ -1.04
CLDND1-229ENST00000513988 CPNE5Q9HCH3 593 aa8.54□□□□□ -1.04
CLDND1-229ENST00000513988 KCNH7Q9NS40 1196 aa8.54□□□□□ -1.04
CLDND1-229ENST00000513988 TLN1Q9Y490 2541 aaKnown RBP8.53□□□□□ -1.04
CLDND1-229ENST00000513988 TDRD15B5MCY1 1934 aaKnown RBP8.53□□□□□ -1.04
CLDND1-229ENST00000513988 ARHGEF37A1IGU5 675 aa8.53□□□□□ -1.04
CLDND1-229ENST00000513988 PRRG1O14668 218 aa8.53□□□□□ -1.04
CLDND1-229ENST00000513988 TRDMT1O14717 391 aaKnown RBP8.53□□□□□ -1.04
CLDND1-229ENST00000513988 MYL4P12829 197 aa8.53□□□□□ -1.04
CLDND1-229ENST00000513988 ITGA4P13612 1032 aa8.53□□□□□ -1.04
CLDND1-229ENST00000513988 GJA1P17302 382 aa8.53□□□□□ -1.04
CLDND1-229ENST00000513988 ATP4AP20648 1035 aa8.53□□□□□ -1.04
CLDND1-229ENST00000513988 DRD1P21728 446 aa8.53□□□□□ -1.04
CLDND1-229ENST00000513988 ELF1P32519 619 aa8.53□□□□□ -1.04
CLDND1-229ENST00000513988 KIF5BP33176 963 aa8.53□□□□□ -1.04
CLDND1-229ENST00000513988 MLH1P40692 756 aa8.53□□□□□ -1.04
CLDND1-229ENST00000513988 P2RY2P41231 377 aa8.53□□□□□ -1.04
CLDND1-229ENST00000513988 PLCB2Q00722 1185 aa8.53□□□□□ -1.04
CLDND1-229ENST00000513988 IQCEQ6IPM2 695 aa8.53□□□□□ -1.04
CLDND1-229ENST00000513988 SWSAP1Q6NVH7 229 aa8.53□□□□□ -1.04
CLDND1-229ENST00000513988 MIS18BP1Q6P0N0 1132 aa8.53□□□□□ -1.04
CLDND1-229ENST00000513988 ABHD15Q6UXT9 468 aa8.53□□□□□ -1.04
CLDND1-229ENST00000513988 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.53□□□□□ -1.04
CLDND1-229ENST00000513988 MFSD6Q6ZSS7 791 aa8.53□□□□□ -1.04
CLDND1-229ENST00000513988 ELMOD1Q8N336 334 aa8.53□□□□□ -1.04
CLDND1-229ENST00000513988 RABGGTAQ92696 567 aa8.53□□□□□ -1.04
CLDND1-229ENST00000513988 LY9Q9HBG7 655 aa8.53□□□□□ -1.04
CLDND1-229ENST00000513988 LRRC4CQ9HCJ2 640 aa8.53□□□□□ -1.04
CLDND1-229ENST00000513988 F8P00451 2351 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms