RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 THAP2Q9H0W7 228 aa13.77□□□□□ -0.21
PVT1-203ENST00000513868 C2CD2Q9Y426 696 aa13.77□□□□□ -0.21
PVT1-203ENST00000513868 HES2Q9Y543 173 aa13.77□□□□□ -0.21
PVT1-203ENST00000513868 PCDHB4Q9Y5E5 795 aa13.77□□□□□ -0.21
PVT1-203ENST00000513868 SAR1BQ9Y6B6 198 aa13.77□□□□□ -0.21
PVT1-203ENST00000513868 FAM170AA1A519 330 aa13.76□□□□□ -0.21
PVT1-203ENST00000513868 SRGAP2O75044 1071 aa13.76□□□□□ -0.21
PVT1-203ENST00000513868 TADA3O75528 432 aa13.76□□□□□ -0.21
PVT1-203ENST00000513868 CHRNA1P02708 482 aa13.76□□□□□ -0.21
PVT1-203ENST00000513868 ITGB3P05106 788 aa13.76□□□□□ -0.21
PVT1-203ENST00000513868 NAP1L1P55209 391 aaKnown RBP13.76□□□□□ -0.21
PVT1-203ENST00000513868 TMEM132DQ14C87 1099 aa13.76□□□□□ -0.21
PVT1-203ENST00000513868 ZBTB6Q15916 424 aa13.76□□□□□ -0.21
PVT1-203ENST00000513868 ZNF699Q32M78 642 aa13.76□□□□□ -0.21
PVT1-203ENST00000513868 TMEM270Q6UE05 265 aa13.76□□□□□ -0.21
PVT1-203ENST00000513868 RPAINQ86UA6 219 aa13.76□□□□□ -0.21
PVT1-203ENST00000513868 FAM228AQ86W67 206 aa13.76□□□□□ -0.21
PVT1-203ENST00000513868 NT5DC4Q86YG4 428 aa13.76□□□□□ -0.21
PVT1-203ENST00000513868 CD302Q8IX05 232 aa13.76□□□□□ -0.21
PVT1-203ENST00000513868 RBBP8NLQ8NC74 664 aaPredicted RBP13.76□□□□□ -0.21
PVT1-203ENST00000513868 TPCN2Q8NHX9 752 aa13.76□□□□□ -0.21
PVT1-203ENST00000513868 TAF4BQ92750 862 aa13.76□□□□□ -0.21
PVT1-203ENST00000513868 SNX27Q96L92 541 aa13.76□□□□□ -0.21
PVT1-203ENST00000513868 ZMAT2Q96NC0 199 aaKnown RBP13.76□□□□□ -0.21
PVT1-203ENST00000513868 CCDC94Q9BW85 323 aaPredicted RBP13.76□□□□□ -0.21
PVT1-203ENST00000513868 PLEKHA5Q9HAU0 1116 aa13.76□□□□□ -0.21
PVT1-203ENST00000513868 SNX12Q9UMY4 172 aa13.76□□□□□ -0.21
PVT1-203ENST00000513868 PIN4Q9Y237 131 aaKnown RBP13.76□□□□□ -0.21
PVT1-203ENST00000513868 NOC2LQ9Y3T9 749 aaKnown RBP13.76□□□□□ -0.21
PVT1-203ENST00000513868 CDY2AQ9Y6F7 541 aa13.76□□□□□ -0.21
PVT1-203ENST00000513868 CEP350Q5VT06 3117 aa13.76□□□□□ -0.21
PVT1-203ENST00000513868 NCK2O43639 380 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 FKTNO75072 461 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 MYCNP04198 464 aaPredicted RBP13.75□□□□□ -0.21
PVT1-203ENST00000513868 UNGP13051 313 aaPredicted RBP13.75□□□□□ -0.21
PVT1-203ENST00000513868 PRLRP16471 622 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 ABCB4P21439 1286 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 GUCY2FP51841 1108 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 BPIFB4P59827 614 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 MGAT3Q09327 533 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 TCEAL1Q15170 157 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 WHAMMP3Q1A5X7 153 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 FAM47CQ5HY64 1035 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 MEI1Q5TIA1 1274 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 LHX8Q68G74 356 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 APBB1IPQ7Z5R6 666 aaPredicted RBP13.75□□□□□ -0.21
PVT1-203ENST00000513868 SLFN11Q7Z7L1 901 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 ZNF677Q86XU0 584 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 PCSK9Q8NBP7 692 aaKnown RBP13.75□□□□□ -0.21
PVT1-203ENST00000513868 SLC35G2Q8TBE7 412 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 CTNNBL1Q8WYA6 563 aaPredicted RBP13.75□□□□□ -0.21
PVT1-203ENST00000513868 RFFLQ8WZ73 363 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 BCO2Q9BYV7 579 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 NXF3Q9H4D5 531 aaKnown RBP13.75□□□□□ -0.21
PVT1-203ENST00000513868 VRTNQ9H8Y1 702 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 OSGEPQ9NPF4 335 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 CISHQ9NSE2 258 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.75□□□□□ -0.21
PVT1-203ENST00000513868 POLIQ9UNA4 740 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 TRPV2Q9Y5S1 764 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 V9GYY5 206 aaPredicted RBP13.75□□□□□ -0.21
PVT1-203ENST00000513868 ZNF185O15231 689 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 INHAP05111 366 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 CFHP08603 1231 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 KRT19P08727 400 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 WEE2P0C1S8 567 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 NOP2P46087 812 aaKnown RBP13.75□□□□□ -0.21
PVT1-203ENST00000513868 CLEC16AQ2KHT3 1053 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 SMYD5Q6GMV2 418 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 ACAD10Q6JQN1 1059 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 RSRC2Q7L4I2 434 aaKnown RBP13.75□□□□□ -0.21
PVT1-203ENST00000513868 MNS1Q8NEH6 495 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 FAXDC2Q96IV6 333 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 OSBPL7Q9BZF2 842 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 SENP6Q9GZR1 1112 aaPredicted RBP13.75□□□□□ -0.21
PVT1-203ENST00000513868 GOLPH3Q9H4A6 298 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 SAGE1Q9NXZ1 904 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 DPP3Q9NY33 737 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 COG5Q9UP83 839 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 DERAQ9Y315 318 aa13.75□□□□□ -0.21
PVT1-203ENST00000513868 EFCAB8A8MWE9 144 aa13.74□□□□□ -0.21
PVT1-203ENST00000513868 RECQL4O94761 1208 aa13.74□□□□□ -0.21
PVT1-203ENST00000513868 FTCDO95954 541 aa13.74□□□□□ -0.21
PVT1-203ENST00000513868 CYP1A1P04798 512 aaPredicted RBP13.74□□□□□ -0.21
PVT1-203ENST00000513868 POLR2BP30876 1174 aaKnown RBP13.74□□□□□ -0.21
PVT1-203ENST00000513868 ATICP31939 592 aa13.74□□□□□ -0.21
PVT1-203ENST00000513868 ACLYP53396 1101 aa13.74□□□□□ -0.21
PVT1-203ENST00000513868 HADHBP55084 474 aaKnown RBP13.74□□□□□ -0.21
PVT1-203ENST00000513868 IFI16Q16666 785 aaKnown RBP13.74□□□□□ -0.21
PVT1-203ENST00000513868 ERCC6LQ2NKX8 1250 aa13.74□□□□□ -0.21
PVT1-203ENST00000513868 WDR72Q3MJ13 1102 aa13.74□□□□□ -0.21
PVT1-203ENST00000513868 XKR4Q5GH76 650 aa13.74□□□□□ -0.21
PVT1-203ENST00000513868 RNF180Q86T96 592 aa13.74□□□□□ -0.21
PVT1-203ENST00000513868 SMG8Q8ND04 991 aaKnown RBP13.74□□□□□ -0.21
PVT1-203ENST00000513868 KIF12Q96FN5 646 aa13.74□□□□□ -0.21
PVT1-203ENST00000513868 ZSWIM1Q9BR11 485 aa13.74□□□□□ -0.21
PVT1-203ENST00000513868 SDCBP2Q9H190 292 aa13.74□□□□□ -0.21
PVT1-203ENST00000513868 RNF39Q9H2S5 420 aa13.74□□□□□ -0.21
PVT1-203ENST00000513868 CNTN3Q9P232 1028 aa13.74□□□□□ -0.21
PVT1-203ENST00000513868 ITGA11Q9UKX5 1188 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms