RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 PPP1R2P3Q6NXS1 205 aa10.64□□□□□ -0.71
TPM3-221ENST00000513769 SLC27A1Q6PCB7 646 aa10.64□□□□□ -0.71
TPM3-221ENST00000513769 TOGARAM2Q6ZUX3 1019 aa10.64□□□□□ -0.71
TPM3-221ENST00000513769 SERINC5Q86VE9 423 aa10.64□□□□□ -0.71
TPM3-221ENST00000513769 FAM71AQ8IYT1 594 aa10.64□□□□□ -0.71
TPM3-221ENST00000513769 TTC39CQ8N584 583 aa10.64□□□□□ -0.71
TPM3-221ENST00000513769 ZSWIM2Q8NEG5 633 aa10.64□□□□□ -0.71
TPM3-221ENST00000513769 DNAJB3Q8WWF6 145 aa10.64□□□□□ -0.71
TPM3-221ENST00000513769 ANKRD36BP1Q96IX9 119 aa10.64□□□□□ -0.71
TPM3-221ENST00000513769 POP1Q99575 1024 aaKnown RBP10.64□□□□□ -0.71
TPM3-221ENST00000513769 IMPG2Q9BZV3 1241 aa10.64□□□□□ -0.71
TPM3-221ENST00000513769 PDE11AQ9HCR9 933 aa10.64□□□□□ -0.71
TPM3-221ENST00000513769 C2CD2Q9Y426 696 aa10.64□□□□□ -0.71
TPM3-221ENST00000513769 PCDHA13Q9Y5I0 950 aa10.64□□□□□ -0.71
TPM3-221ENST00000513769 FHOD1Q9Y613 1164 aa10.64□□□□□ -0.71
TPM3-221ENST00000513769 F8VZ95 297 aa10.63□□□□□ -0.71
TPM3-221ENST00000513769 GPR182O15218 404 aa10.63□□□□□ -0.71
TPM3-221ENST00000513769 TSPAN1O60635 241 aa10.63□□□□□ -0.71
TPM3-221ENST00000513769 PHACTR2O75167 634 aa10.63□□□□□ -0.71
TPM3-221ENST00000513769 PGK1P00558 417 aa10.63□□□□□ -0.71
TPM3-221ENST00000513769 TNNC2P02585 160 aa10.63□□□□□ -0.71
TPM3-221ENST00000513769 GJB1P08034 283 aa10.63□□□□□ -0.71
TPM3-221ENST00000513769 FAM163BP0C2L3 166 aa10.63□□□□□ -0.71
TPM3-221ENST00000513769 STAG3L1P0CL83 205 aa10.63□□□□□ -0.71
TPM3-221ENST00000513769 JUNDP17535 347 aa10.63□□□□□ -0.71
TPM3-221ENST00000513769 CCND3P30281 292 aaPredicted RBP10.63□□□□□ -0.71
TPM3-221ENST00000513769 KIF11P52732 1056 aa10.63□□□□□ -0.71
TPM3-221ENST00000513769 VAV2P52735 878 aa10.63□□□□□ -0.71
TPM3-221ENST00000513769 RAPGEF1Q13905 1077 aa10.63□□□□□ -0.71
TPM3-221ENST00000513769 CATSPER4Q7RTX7 472 aa10.63□□□□□ -0.71
TPM3-221ENST00000513769 TRAPPC11Q7Z392 1133 aa10.63□□□□□ -0.71
TPM3-221ENST00000513769 ZNF677Q86XU0 584 aa10.63□□□□□ -0.71
TPM3-221ENST00000513769 SLC30A5Q8TAD4 765 aa10.63□□□□□ -0.71
TPM3-221ENST00000513769 HELQQ8TDG4 1101 aa10.63□□□□□ -0.71
TPM3-221ENST00000513769 SHC3Q92529 594 aa10.63□□□□□ -0.71
TPM3-221ENST00000513769 GLT1D1Q96MS3 346 aa10.63□□□□□ -0.71
TPM3-221ENST00000513769 SCLT1Q96NL6 688 aa10.63□□□□□ -0.71
TPM3-221ENST00000513769 CCDC94Q9BW85 323 aaPredicted RBP10.63□□□□□ -0.71
TPM3-221ENST00000513769 TRAIPQ9BWF2 469 aa10.63□□□□□ -0.71
TPM3-221ENST00000513769 CDT1Q9H211 546 aa10.63□□□□□ -0.71
TPM3-221ENST00000513769 PDZD7Q9H5P4 517 aa10.63□□□□□ -0.71
TPM3-221ENST00000513769 VRTNQ9H8Y1 702 aa10.63□□□□□ -0.71
TPM3-221ENST00000513769 AAASQ9NRG9 546 aa10.63□□□□□ -0.71
TPM3-221ENST00000513769 ANKFY1Q9P2R3 1169 aa10.63□□□□□ -0.71
TPM3-221ENST00000513769 ADAMTS1Q9UHI8 967 aa10.63□□□□□ -0.71
TPM3-221ENST00000513769 CNTN6Q9UQ52 1028 aa10.63□□□□□ -0.71
TPM3-221ENST00000513769 SIP14410 1827 aa10.63□□□□□ -0.71
TPM3-221ENST00000513769 USP27XA6NNY8 438 aa10.62□□□□□ -0.71
TPM3-221ENST00000513769 STAU1O95793 577 aaKnown RBP10.62□□□□□ -0.71
TPM3-221ENST00000513769 EDN1P05305 212 aa10.62□□□□□ -0.71
TPM3-221ENST00000513769 TNFAIP3P21580 790 aa10.62□□□□□ -0.71
TPM3-221ENST00000513769 ACLYP53396 1101 aa10.62□□□□□ -0.71
TPM3-221ENST00000513769 YARSP54577 528 aaKnown RBP10.62□□□□□ -0.71
TPM3-221ENST00000513769 YWHAEP62258 255 aaKnown RBP10.62□□□□□ -0.71
TPM3-221ENST00000513769 PTK2Q05397 1052 aa10.62□□□□□ -0.71
TPM3-221ENST00000513769 PTK7Q13308 1070 aa10.62□□□□□ -0.71
TPM3-221ENST00000513769 TRPC3Q13507 836 aa10.62□□□□□ -0.71
TPM3-221ENST00000513769 ITGA7Q13683 1181 aa10.62□□□□□ -0.71
TPM3-221ENST00000513769 MTF1Q14872 753 aa10.62□□□□□ -0.71
TPM3-221ENST00000513769 SNX17Q15036 470 aa10.62□□□□□ -0.71
TPM3-221ENST00000513769 ENOX2Q16206 610 aaKnown RBP10.62□□□□□ -0.71
TPM3-221ENST00000513769 IFI16Q16666 785 aaKnown RBP10.62□□□□□ -0.71
TPM3-221ENST00000513769 KIZQ2M2Z5 673 aa10.62□□□□□ -0.71
TPM3-221ENST00000513769 SLC10A6Q3KNW5 377 aa10.62□□□□□ -0.71
TPM3-221ENST00000513769 FAM26DQ5JW98 314 aa10.62□□□□□ -0.71
TPM3-221ENST00000513769 CCDC122Q5T0U0 273 aa10.62□□□□□ -0.71
TPM3-221ENST00000513769 CXCL17Q6UXB2 119 aa10.62□□□□□ -0.71
TPM3-221ENST00000513769 ALKAL1Q6UXT8 129 aa10.62□□□□□ -0.71
TPM3-221ENST00000513769 ZBTB33Q86T24 672 aa10.62□□□□□ -0.71
TPM3-221ENST00000513769 KIAA1328Q86T90 577 aa10.62□□□□□ -0.71
TPM3-221ENST00000513769 RETREG3Q86VR2 466 aa10.62□□□□□ -0.71
TPM3-221ENST00000513769 THNSL1Q8IYQ7 743 aa10.62□□□□□ -0.71
TPM3-221ENST00000513769 SLC43A3Q8NBI5 491 aa10.62□□□□□ -0.71
TPM3-221ENST00000513769 TAS1R2Q8TE23 839 aa10.62□□□□□ -0.71
TPM3-221ENST00000513769 SEMA4DQ92854 862 aa10.62□□□□□ -0.71
TPM3-221ENST00000513769 IFIH1Q9BYX4 1025 aaKnown RBP10.62□□□□□ -0.71
TPM3-221ENST00000513769 TOPORSQ9NS56 1045 aaPredicted RBP10.62□□□□□ -0.71
TPM3-221ENST00000513769 C1orf112Q9NSG2 853 aa10.62□□□□□ -0.71
TPM3-221ENST00000513769 PCDHGC3Q9UN70 934 aa10.62□□□□□ -0.71
TPM3-221ENST00000513769 PTPN22Q9Y2R2 807 aa10.62□□□□□ -0.71
TPM3-221ENST00000513769 R3HCC1Q9Y3T6 440 aaKnown RBP10.62□□□□□ -0.71
TPM3-221ENST00000513769 PCDHB2Q9Y5E7 798 aa10.62□□□□□ -0.71
TPM3-221ENST00000513769 MROH7Q68CQ1 1323 aa10.61□□□□□ -0.71
TPM3-221ENST00000513769 TTC24A2A3L6 582 aaPredicted RBP10.61□□□□□ -0.71
TPM3-221ENST00000513769 B4GALT5O43286 388 aa10.61□□□□□ -0.71
TPM3-221ENST00000513769 XPOTO43592 962 aaKnown RBP10.61□□□□□ -0.71
TPM3-221ENST00000513769 ASS1P00966 412 aaKnown RBP10.61□□□□□ -0.71
TPM3-221ENST00000513769 CST3P01034 146 aaPredicted RBP10.61□□□□□ -0.71
TPM3-221ENST00000513769 HLA-DRAP01903 254 aa10.61□□□□□ -0.71
TPM3-221ENST00000513769 SKIP12755 728 aa10.61□□□□□ -0.71
TPM3-221ENST00000513769 P4HA1P13674 534 aa10.61□□□□□ -0.71
TPM3-221ENST00000513769 ELNP15502 786 aa10.61□□□□□ -0.71
TPM3-221ENST00000513769 PRLRP16471 622 aa10.61□□□□□ -0.71
TPM3-221ENST00000513769 PAX3P23760 479 aa10.61□□□□□ -0.71
TPM3-221ENST00000513769 CASQ1P31415 396 aa10.61□□□□□ -0.71
TPM3-221ENST00000513769 MRPS6P82932 125 aaKnown RBP10.61□□□□□ -0.71
TPM3-221ENST00000513769 BIRC3Q13489 604 aa10.61□□□□□ -0.71
TPM3-221ENST00000513769 NCOA4Q13772 614 aa10.61□□□□□ -0.71
TPM3-221ENST00000513769 TCEAL1Q15170 157 aa10.61□□□□□ -0.71
TPM3-221ENST00000513769 ZBTB6Q15916 424 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 241 ms