RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 KIAA0895Q8NCT3 520 aa10.55□□□□□ -0.72
RNF4-221ENST00000513643 POMGNT1Q8WZA1 660 aa10.55□□□□□ -0.72
RNF4-221ENST00000513643 ZNF707Q96C28 371 aaPredicted RBP10.55□□□□□ -0.72
RNF4-221ENST00000513643 KIF12Q96FN5 646 aa10.55□□□□□ -0.72
RNF4-221ENST00000513643 PLEKHA4Q9H4M7 779 aa10.55□□□□□ -0.72
RNF4-221ENST00000513643 GDPD2Q9HCC8 539 aa10.55□□□□□ -0.72
RNF4-221ENST00000513643 CIZ1Q9ULV3 898 aaPredicted RBP10.55□□□□□ -0.72
RNF4-221ENST00000513643 UBE4BO95155 1302 aa10.55□□□□□ -0.72
RNF4-221ENST00000513643 PI4K2BG5E9Z4 385 aa10.54□□□□□ -0.72
RNF4-221ENST00000513643 PPEF2O14830 753 aa10.54□□□□□ -0.72
RNF4-221ENST00000513643 SPTLC1O15269 473 aa10.54□□□□□ -0.72
RNF4-221ENST00000513643 ABLIM3O94929 683 aa10.54□□□□□ -0.72
RNF4-221ENST00000513643 ZNF202O95125 648 aa10.54□□□□□ -0.72
RNF4-221ENST00000513643 IL18RAPO95256 599 aa10.54□□□□□ -0.72
RNF4-221ENST00000513643 LDHAP00338 332 aaKnown RBP10.54□□□□□ -0.72
RNF4-221ENST00000513643 GLUD1P00367 558 aa10.54□□□□□ -0.72
RNF4-221ENST00000513643 POU2F2P09086 479 aa10.54□□□□□ -0.72
RNF4-221ENST00000513643 RPL17P18621 184 aaKnown RBP10.54□□□□□ -0.72
RNF4-221ENST00000513643 SYKP43405 635 aa10.54□□□□□ -0.72
RNF4-221ENST00000513643 GUCY2FP51841 1108 aa10.54□□□□□ -0.72
RNF4-221ENST00000513643 LILRA4P59901 499 aa10.54□□□□□ -0.72
RNF4-221ENST00000513643 DPYDQ12882 1025 aa10.54□□□□□ -0.72
RNF4-221ENST00000513643 PSMD2Q13200 908 aa10.54□□□□□ -0.72
RNF4-221ENST00000513643 PDCD11Q14690 1871 aaKnown RBP10.54□□□□□ -0.72
RNF4-221ENST00000513643 PSMD5Q16401 504 aa10.54□□□□□ -0.72
RNF4-221ENST00000513643 C9orf57Q5W0N0 161 aa10.54□□□□□ -0.72
RNF4-221ENST00000513643 KRBA2Q6ZNG9 492 aa10.54□□□□□ -0.72
RNF4-221ENST00000513643 ANKS3Q6ZW76 656 aa10.54□□□□□ -0.72
RNF4-221ENST00000513643 STXBP4Q6ZWJ1 553 aa10.54□□□□□ -0.72
RNF4-221ENST00000513643 RTL10Q7L3V2 364 aa10.54□□□□□ -0.72
RNF4-221ENST00000513643 CEP57L1Q8IYX8 460 aa10.54□□□□□ -0.72
RNF4-221ENST00000513643 FMR1NBQ8N0W7 255 aaPredicted RBP10.54□□□□□ -0.72
RNF4-221ENST00000513643 SPATA20Q8TB22 786 aa10.54□□□□□ -0.72
RNF4-221ENST00000513643 NECTIN4Q96NY8 510 aa10.54□□□□□ -0.72
RNF4-221ENST00000513643 GZF1Q9H116 711 aaPredicted RBP10.54□□□□□ -0.72
RNF4-221ENST00000513643 SFXN1Q9H9B4 322 aa10.54□□□□□ -0.72
RNF4-221ENST00000513643 AGPAT3Q9NRZ7 376 aa10.54□□□□□ -0.72
RNF4-221ENST00000513643 DMAC2Q9NW81 257 aa10.54□□□□□ -0.72
RNF4-221ENST00000513643 DPP7Q9UHL4 492 aa10.54□□□□□ -0.72
RNF4-221ENST00000513643 CDH22Q9UJ99 828 aa10.54□□□□□ -0.72
RNF4-221ENST00000513643 FBXW11Q9UKB1 542 aa10.54□□□□□ -0.72
RNF4-221ENST00000513643 PCDHB8Q9UN66 801 aa10.54□□□□□ -0.72
RNF4-221ENST00000513643 I3L4J1 428 aa10.53□□□□□ -0.72
RNF4-221ENST00000513643 XPOTO43592 962 aaKnown RBP10.53□□□□□ -0.72
RNF4-221ENST00000513643 ZMYND10O75800 440 aa10.53□□□□□ -0.72
RNF4-221ENST00000513643 RHOBTB3O94955 611 aa10.53□□□□□ -0.72
RNF4-221ENST00000513643 CYP11A1P05108 521 aa10.53□□□□□ -0.72
RNF4-221ENST00000513643 HOXA9P31269 272 aa10.53□□□□□ -0.72
RNF4-221ENST00000513643 MTHFRP42898 656 aa10.53□□□□□ -0.72
RNF4-221ENST00000513643 MATR3P43243 847 aaKnown RBP eCLIP10.53□□□□□ -0.72
RNF4-221ENST00000513643 KNOP1Q1ED39 458 aaKnown RBP10.53□□□□□ -0.72
RNF4-221ENST00000513643 UVSSAQ2YD98 709 aa10.53□□□□□ -0.72
RNF4-221ENST00000513643 KMT5BQ4FZB7 885 aa10.53□□□□□ -0.72
RNF4-221ENST00000513643 VARS2Q5ST30 1063 aaKnown RBP10.53□□□□□ -0.72
RNF4-221ENST00000513643 SCARA3Q6AZY7 606 aa10.53□□□□□ -0.72
RNF4-221ENST00000513643 ELOA2Q8IYF1 753 aaPredicted RBP10.53□□□□□ -0.72
RNF4-221ENST00000513643 FSIP1Q8NA03 581 aa10.53□□□□□ -0.72
RNF4-221ENST00000513643 KREMEN2Q8NCW0 462 aa10.53□□□□□ -0.72
RNF4-221ENST00000513643 BEST2Q8NFU1 509 aa10.53□□□□□ -0.72
RNF4-221ENST00000513643 SAAL1Q96ER3 474 aa10.53□□□□□ -0.72
RNF4-221ENST00000513643 POP1Q99575 1024 aaKnown RBP10.53□□□□□ -0.72
RNF4-221ENST00000513643 FAM213AQ9BRX8 229 aa10.53□□□□□ -0.72
RNF4-221ENST00000513643 KCTD10Q9H3F6 313 aa10.53□□□□□ -0.72
RNF4-221ENST00000513643 POMKQ9H5K3 350 aa10.53□□□□□ -0.72
RNF4-221ENST00000513643 SLC39A2Q9NP94 309 aa10.53□□□□□ -0.72
RNF4-221ENST00000513643 MAN1C1Q9NR34 630 aa10.53□□□□□ -0.72
RNF4-221ENST00000513643 ZDHHC7Q9NXF8 308 aa10.53□□□□□ -0.72
RNF4-221ENST00000513643 CGNQ9P2M7 1197 aaKnown RBP10.53□□□□□ -0.72
RNF4-221ENST00000513643 RFPL2O75678 378 aa10.52□□□□□ -0.73
RNF4-221ENST00000513643 PRR29P0C7W0 189 aa10.52□□□□□ -0.73
RNF4-221ENST00000513643 TYMPP19971 482 aa10.52□□□□□ -0.73
RNF4-221ENST00000513643 OR1D2P34982 312 aa10.52□□□□□ -0.73
RNF4-221ENST00000513643 KCNB1Q14721 858 aa10.52□□□□□ -0.73
RNF4-221ENST00000513643 TMEM132DQ14C87 1099 aa10.52□□□□□ -0.73
RNF4-221ENST00000513643 ATAT1Q5SQI0 421 aa10.52□□□□□ -0.73
RNF4-221ENST00000513643 RARS2Q5T160 578 aaKnown RBP10.52□□□□□ -0.73
RNF4-221ENST00000513643 CES5AQ6NT32 575 aa10.52□□□□□ -0.73
RNF4-221ENST00000513643 TMC5Q6UXY8 1006 aa10.52□□□□□ -0.73
RNF4-221ENST00000513643 LIMS2Q7Z4I7 341 aa10.52□□□□□ -0.73
RNF4-221ENST00000513643 CEP57Q86XR8 500 aa10.52□□□□□ -0.73
RNF4-221ENST00000513643 PALB2Q86YC2 1186 aa10.52□□□□□ -0.73
RNF4-221ENST00000513643 CBWD2Q8IUF1 395 aa10.52□□□□□ -0.73
RNF4-221ENST00000513643 SLC9A9Q8IVB4 645 aa10.52□□□□□ -0.73
RNF4-221ENST00000513643 SYCP3Q8IZU3 236 aa10.52□□□□□ -0.73
RNF4-221ENST00000513643 GPD1LQ8N335 351 aa10.52□□□□□ -0.73
RNF4-221ENST00000513643 C1orf127Q8N9H9 656 aa10.52□□□□□ -0.73
RNF4-221ENST00000513643 TMEM87AQ8NBN3 555 aa10.52□□□□□ -0.73
RNF4-221ENST00000513643 APPL2Q8NEU8 664 aa10.52□□□□□ -0.73
RNF4-221ENST00000513643 ZNF461Q8TAF7 563 aa10.52□□□□□ -0.73
RNF4-221ENST00000513643 APOL5Q9BWW9 433 aa10.52□□□□□ -0.73
RNF4-221ENST00000513643 PRKD2Q9BZL6 878 aa10.52□□□□□ -0.73
RNF4-221ENST00000513643 PCIF1Q9H4Z3 704 aa10.52□□□□□ -0.73
RNF4-221ENST00000513643 KIAA1586Q9HCI6 787 aa10.52□□□□□ -0.73
RNF4-221ENST00000513643 DPP3Q9NY33 737 aa10.52□□□□□ -0.73
RNF4-221ENST00000513643 HSPBP1Q9NZL4 362 aa10.52□□□□□ -0.73
RNF4-221ENST00000513643 FBXL5Q9UKA1 691 aa10.52□□□□□ -0.73
RNF4-221ENST00000513643 MAFFQ9ULX9 164 aa10.52□□□□□ -0.73
RNF4-221ENST00000513643 USTQ9Y2C2 406 aa10.52□□□□□ -0.73
RNF4-221ENST00000513643 ANK1P16157 1881 aa10.51□□□□□ -0.73
RNF4-221ENST00000513643 MTCL1Q9Y4B5 1905 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms