RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 PPP2R5DQ14738 602 aa13.73□□□□□ -0.21
VEGFA-216ENST00000512683 CTXN3Q4LDR2 81 aa13.73□□□□□ -0.21
VEGFA-216ENST00000512683 RILPL1Q5EBL4 403 aa13.73□□□□□ -0.21
VEGFA-216ENST00000512683 PRSS36Q5K4E3 855 aa13.73□□□□□ -0.21
VEGFA-216ENST00000512683 ZNF280DQ6N043 979 aa13.73□□□□□ -0.21
VEGFA-216ENST00000512683 PDZD4Q76G19 769 aaPredicted RBP13.73□□□□□ -0.21
VEGFA-216ENST00000512683 C3orf58Q8NDZ4 430 aa13.73□□□□□ -0.21
VEGFA-216ENST00000512683 MSANTD3Q96H12 275 aa13.73□□□□□ -0.21
VEGFA-216ENST00000512683 ZMAT2Q96NC0 199 aaKnown RBP13.73□□□□□ -0.21
VEGFA-216ENST00000512683 TBC1D32Q96NH3 1257 aa13.73□□□□□ -0.21
VEGFA-216ENST00000512683 KXD1Q9BQD3 176 aa13.73□□□□□ -0.21
VEGFA-216ENST00000512683 TRMT61BQ9BVS5 477 aaKnown RBP13.73□□□□□ -0.21
VEGFA-216ENST00000512683 FBXL5Q9UKA1 691 aa13.73□□□□□ -0.21
VEGFA-216ENST00000512683 PCDHB8Q9UN66 801 aa13.73□□□□□ -0.21
VEGFA-216ENST00000512683 CACNA1AO00555 2505 aa13.73□□□□□ -0.21
VEGFA-216ENST00000512683 PLXNA3P51805 1871 aa13.73□□□□□ -0.21
VEGFA-216ENST00000512683 ZNF292O60281 2723 aa13.72□□□□□ -0.21
VEGFA-216ENST00000512683 E9PMD0 336 aa13.72□□□□□ -0.21
VEGFA-216ENST00000512683 XPOTO43592 962 aaKnown RBP13.72□□□□□ -0.21
VEGFA-216ENST00000512683 CLTAP09496 248 aa13.72□□□□□ -0.21
VEGFA-216ENST00000512683 IGFBP6P24592 240 aaPredicted RBP13.72□□□□□ -0.21
VEGFA-216ENST00000512683 LRPAP1P30533 357 aa13.72□□□□□ -0.21
VEGFA-216ENST00000512683 EPHA5P54756 1037 aa13.72□□□□□ -0.21
VEGFA-216ENST00000512683 MCL1Q07820 350 aa13.72□□□□□ -0.21
VEGFA-216ENST00000512683 MAPK7Q13164 816 aa13.72□□□□□ -0.21
VEGFA-216ENST00000512683 PLD1Q13393 1074 aa13.72□□□□□ -0.21
VEGFA-216ENST00000512683 SLC10A6Q3KNW5 377 aa13.72□□□□□ -0.21
VEGFA-216ENST00000512683 ARL6IP4Q66PJ3 421 aaKnown RBP13.72□□□□□ -0.21
VEGFA-216ENST00000512683 TANGO2Q6ICL3 276 aa13.72□□□□□ -0.21
VEGFA-216ENST00000512683 TAS1R3Q7RTX0 852 aa13.72□□□□□ -0.21
VEGFA-216ENST00000512683 CEP120Q8N960 986 aa13.72□□□□□ -0.21
VEGFA-216ENST00000512683 SYT2Q8N9I0 419 aaPredicted RBP13.72□□□□□ -0.21
VEGFA-216ENST00000512683 TMEM161BQ8NDZ6 487 aa13.72□□□□□ -0.21
VEGFA-216ENST00000512683 BEST2Q8NFU1 509 aa13.72□□□□□ -0.21
VEGFA-216ENST00000512683 DEPDC1BQ8WUY9 529 aa13.72□□□□□ -0.21
VEGFA-216ENST00000512683 SMARCD2Q92925 531 aa13.72□□□□□ -0.21
VEGFA-216ENST00000512683 CORO1BQ9BR76 489 aa13.72□□□□□ -0.21
VEGFA-216ENST00000512683 GOLGA2P5Q9HBQ8 144 aa13.72□□□□□ -0.21
VEGFA-216ENST00000512683 POLD4Q9HCU8 107 aa13.72□□□□□ -0.21
VEGFA-216ENST00000512683 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.72□□□□□ -0.21
VEGFA-216ENST00000512683 DLL3Q9NYJ7 618 aa13.72□□□□□ -0.21
VEGFA-216ENST00000512683 LARSQ9P2J5 1176 aaKnown RBP13.72□□□□□ -0.21
VEGFA-216ENST00000512683 MTF2Q9Y483 593 aaPredicted RBP13.72□□□□□ -0.21
VEGFA-216ENST00000512683 INSL5Q9Y5Q6 135 aa13.72□□□□□ -0.21
VEGFA-216ENST00000512683 MTCL1Q9Y4B5 1905 aaKnown RBP13.72□□□□□ -0.21
VEGFA-216ENST00000512683 C2orf16Q68DN1 1984 aa13.71□□□□□ -0.21
VEGFA-216ENST00000512683 PP2D1A8MPX8 630 aa13.71□□□□□ -0.21
VEGFA-216ENST00000512683 I3L4J1 428 aa13.71□□□□□ -0.21
VEGFA-216ENST00000512683 M0QZQ0 153 aa13.71□□□□□ -0.21
VEGFA-216ENST00000512683 LILRB5O75023 590 aa13.71□□□□□ -0.21
VEGFA-216ENST00000512683 PSMC3P17980 439 aa13.71□□□□□ -0.21
VEGFA-216ENST00000512683 GJB2P29033 226 aa13.71□□□□□ -0.21
VEGFA-216ENST00000512683 OSTNP61366 133 aa13.71□□□□□ -0.21
VEGFA-216ENST00000512683 CSTF1Q05048 431 aaKnown RBP13.71□□□□□ -0.21
VEGFA-216ENST00000512683 FZD5Q13467 585 aa13.71□□□□□ -0.21
VEGFA-216ENST00000512683 NOLC1Q14978 699 aaKnown RBP eCLIP13.71□□□□□ -0.21
VEGFA-216ENST00000512683 SLC5A9Q2M3M2 681 aa13.71□□□□□ -0.21
VEGFA-216ENST00000512683 TPRG1Q6ZUI0 275 aa13.71□□□□□ -0.21
VEGFA-216ENST00000512683 DGLUCYQ7Z3D6 616 aa13.71□□□□□ -0.21
VEGFA-216ENST00000512683 MAP4K3Q8IVH8 894 aa13.71□□□□□ -0.21
VEGFA-216ENST00000512683 CD302Q8IX05 232 aa13.71□□□□□ -0.21
VEGFA-216ENST00000512683 DDX12PQ92771 950 aa13.71□□□□□ -0.21
VEGFA-216ENST00000512683 ASB16Q96NS5 453 aa13.71□□□□□ -0.21
VEGFA-216ENST00000512683 RUSC1Q9BVN2 902 aa13.71□□□□□ -0.21
VEGFA-216ENST00000512683 BRD9Q9H8M2 597 aa13.71□□□□□ -0.21
VEGFA-216ENST00000512683 UPF2Q9HAU5 1272 aaKnown RBP13.71□□□□□ -0.21
VEGFA-216ENST00000512683 HSFX1Q9UBD0 423 aa13.71□□□□□ -0.21
VEGFA-216ENST00000512683 ASB3Q9Y575 518 aa13.71□□□□□ -0.21
VEGFA-216ENST00000512683 OR6C75A6NL08 312 aa13.7□□□□□ -0.22
VEGFA-216ENST00000512683 PRR5-ARHGAP8B1AHC4 643 aa13.7□□□□□ -0.22
VEGFA-216ENST00000512683 SLC16A4O15374 487 aa13.7□□□□□ -0.22
VEGFA-216ENST00000512683 LRRN2O75325 713 aa13.7□□□□□ -0.22
VEGFA-216ENST00000512683 SEC24AO95486 1093 aa13.7□□□□□ -0.22
VEGFA-216ENST00000512683 FGF19O95750 216 aa13.7□□□□□ -0.22
VEGFA-216ENST00000512683 ADRB2P07550 413 aa13.7□□□□□ -0.22
VEGFA-216ENST00000512683 MAPTP10636 758 aaKnown RBP13.7□□□□□ -0.22
VEGFA-216ENST00000512683 TARSP26639 723 aaKnown RBP13.7□□□□□ -0.22
VEGFA-216ENST00000512683 MCM4P33991 863 aa13.7□□□□□ -0.22
VEGFA-216ENST00000512683 AARSP49588 968 aaKnown RBP eCLIP13.7□□□□□ -0.221e-6■■■■□ 20.6
VEGFA-216ENST00000512683 ARHGAP8P85298 464 aa13.7□□□□□ -0.22
VEGFA-216ENST00000512683 POU5F1Q01860 360 aaKnown RBP13.7□□□□□ -0.22
VEGFA-216ENST00000512683 YWHAHQ04917 246 aaPredicted RBP13.7□□□□□ -0.22
VEGFA-216ENST00000512683 ZBTB6Q15916 424 aa13.7□□□□□ -0.22
VEGFA-216ENST00000512683 FAM78AQ5JUQ0 283 aa13.7□□□□□ -0.22
VEGFA-216ENST00000512683 MCTP1Q6DN14 999 aa13.7□□□□□ -0.22
VEGFA-216ENST00000512683 MFSD6LQ8IWD5 586 aa13.7□□□□□ -0.22
VEGFA-216ENST00000512683 KIAA2013Q8IYS2 634 aa13.7□□□□□ -0.22
VEGFA-216ENST00000512683 ING5Q8WYH8 240 aa13.7□□□□□ -0.22
VEGFA-216ENST00000512683 RMDN1Q96DB5 314 aa13.7□□□□□ -0.22
VEGFA-216ENST00000512683 AK8Q96MA6 479 aa13.7□□□□□ -0.22
VEGFA-216ENST00000512683 HINFPQ9BQA5 517 aa13.7□□□□□ -0.22
VEGFA-216ENST00000512683 MMTAG2Q9BU76 263 aaKnown RBP13.7□□□□□ -0.22
VEGFA-216ENST00000512683 PLA2G2FQ9BZM2 168 aa13.7□□□□□ -0.22
VEGFA-216ENST00000512683 EPC1Q9H2F5 836 aa13.7□□□□□ -0.22
VEGFA-216ENST00000512683 ZNF334Q9HCZ1 680 aaPredicted RBP13.7□□□□□ -0.22
VEGFA-216ENST00000512683 PRMT8Q9NR22 394 aaPredicted RBP13.7□□□□□ -0.22
VEGFA-216ENST00000512683 ASAH2Q9NR71 780 aa13.7□□□□□ -0.22
VEGFA-216ENST00000512683 UBQLN1Q9UMX0 589 aaKnown RBP13.7□□□□□ -0.22
VEGFA-216ENST00000512683 OTOGLQ3ZCN5 2332 aa13.7□□□□□ -0.22
VEGFA-216ENST00000512683 GPR179Q6PRD1 2367 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms