RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 NOTUMQ6P988 496 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 CXCL17Q6UXB2 119 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 ENOSF1Q7L5Y1 443 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 WDR49Q8IV35 697 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 PPM1KQ8N3J5 372 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 ACRBPQ8NEB7 543 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 ZSWIM2Q8NEG5 633 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 KIF18AQ8NI77 898 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 DNAJB3Q8WWF6 145 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 CPB2Q96IY4 423 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 EIF3CQ99613 913 aaKnown RBP8.71□□□□□ -1.02
HTT-209ENST00000512068 OSMRQ99650 979 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 CHP1Q99653 195 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 CCDC94Q9BW85 323 aaPredicted RBP8.71□□□□□ -1.02
HTT-209ENST00000512068 HAUS4Q9H6D7 363 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 VRTNQ9H8Y1 702 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 IFT122Q9HBG6 1241 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 PDE11AQ9HCR9 933 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 UBE2TQ9NPD8 197 aaPredicted RBP8.71□□□□□ -1.02
HTT-209ENST00000512068 LZTFL1Q9NQ48 299 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 RAB20Q9NX57 234 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 AIPL1Q9NZN9 384 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 USP20Q9Y2K6 914 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 TRIM17Q9Y577 477 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 SCN10AQ9Y5Y9 1956 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 CITO14578 2027 aa8.71□□□□□ -1.02
HTT-209ENST00000512068 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.7□□□□□ -1.02
HTT-209ENST00000512068 MYADML2A6NDP7 307 aa8.7□□□□□ -1.02
HTT-209ENST00000512068 USP27XA6NNY8 438 aa8.7□□□□□ -1.02
HTT-209ENST00000512068 KBTBD13C9JR72 458 aa8.7□□□□□ -1.02
HTT-209ENST00000512068 F8VZ95 297 aa8.7□□□□□ -1.02
HTT-209ENST00000512068 TREHO43280 583 aa8.7□□□□□ -1.02
HTT-209ENST00000512068 B4GALT5O43286 388 aa8.7□□□□□ -1.02
HTT-209ENST00000512068 GFPT2O94808 682 aa8.7□□□□□ -1.02
HTT-209ENST00000512068 INHAP05111 366 aa8.7□□□□□ -1.02
HTT-209ENST00000512068 ASGR1P07306 291 aa8.7□□□□□ -1.02
HTT-209ENST00000512068 TBXAS1P24557 533 aaPredicted RBP8.7□□□□□ -1.02
HTT-209ENST00000512068 CST5P28325 142 aaPredicted RBP8.7□□□□□ -1.02
HTT-209ENST00000512068 CASQ1P31415 396 aa8.7□□□□□ -1.02
HTT-209ENST00000512068 GRK4P32298 578 aa8.7□□□□□ -1.02
HTT-209ENST00000512068 OSTNP61366 133 aa8.7□□□□□ -1.02
HTT-209ENST00000512068 HTRA3P83110 453 aa8.7□□□□□ -1.02
HTT-209ENST00000512068 TFAMQ00059 246 aaKnown RBP8.7□□□□□ -1.02
HTT-209ENST00000512068 KIF5AQ12840 1032 aa8.7□□□□□ -1.02
HTT-209ENST00000512068 KCNA10Q16322 511 aa8.7□□□□□ -1.02
HTT-209ENST00000512068 DUOXA2Q1HG44 320 aa8.7□□□□□ -1.02
HTT-209ENST00000512068 OXLD1Q5BKU9 147 aa8.7□□□□□ -1.02
HTT-209ENST00000512068 LMBRD2Q68DH5 695 aaPredicted RBP8.7□□□□□ -1.02
HTT-209ENST00000512068 WDR59Q6PJI9 974 aa8.7□□□□□ -1.02
HTT-209ENST00000512068 RUFY4Q6ZNE9 571 aa8.7□□□□□ -1.02
HTT-209ENST00000512068 SV2AQ7L0J3 742 aa8.7□□□□□ -1.02
HTT-209ENST00000512068 HACE1Q8IYU2 909 aa8.7□□□□□ -1.02
HTT-209ENST00000512068 ZNF296Q8WUU4 475 aaPredicted RBP8.7□□□□□ -1.02
HTT-209ENST00000512068 JAKMIP2Q96AA8 810 aa8.7□□□□□ -1.02
HTT-209ENST00000512068 GLT1D1Q96MS3 346 aa8.7□□□□□ -1.02
HTT-209ENST00000512068 ACAP3Q96P50 834 aa8.7□□□□□ -1.02
HTT-209ENST00000512068 POP1Q99575 1024 aaKnown RBP8.7□□□□□ -1.02
HTT-209ENST00000512068 KLF16Q9BXK1 252 aaPredicted RBP8.7□□□□□ -1.02
HTT-209ENST00000512068 IFIH1Q9BYX4 1025 aaKnown RBP8.7□□□□□ -1.02
HTT-209ENST00000512068 CDT1Q9H211 546 aa8.7□□□□□ -1.02
HTT-209ENST00000512068 PDZD7Q9H5P4 517 aa8.7□□□□□ -1.02
HTT-209ENST00000512068 SIX2Q9NPC8 291 aa8.7□□□□□ -1.02
HTT-209ENST00000512068 TMPRSS4Q9NRS4 437 aa8.7□□□□□ -1.02
HTT-209ENST00000512068 TOPORSQ9NS56 1045 aaPredicted RBP8.7□□□□□ -1.02
HTT-209ENST00000512068 SEPT11Q9NVA2 429 aaKnown RBP8.7□□□□□ -1.02
HTT-209ENST00000512068 GTF2IRD1Q9UHL9 959 aa8.7□□□□□ -1.02
HTT-209ENST00000512068 CPSF3Q9UKF6 684 aaKnown RBP8.7□□□□□ -1.02
HTT-209ENST00000512068 PAXBP1Q9Y5B6 917 aa8.7□□□□□ -1.02
HTT-209ENST00000512068 TRPV2Q9Y5S1 764 aa8.7□□□□□ -1.02
HTT-209ENST00000512068 TSPAN1O60635 241 aa8.69□□□□□ -1.02
HTT-209ENST00000512068 ADAMTS4O75173 837 aa8.69□□□□□ -1.02
HTT-209ENST00000512068 LRRN2O75325 713 aa8.69□□□□□ -1.02
HTT-209ENST00000512068 CSDE1O75534 798 aaKnown RBP8.69□□□□□ -1.02
HTT-209ENST00000512068 NPTXRO95502 500 aa8.69□□□□□ -1.02
HTT-209ENST00000512068 HLA-DRAP01903 254 aa8.69□□□□□ -1.02
HTT-209ENST00000512068 EDN1P05305 212 aa8.69□□□□□ -1.02
HTT-209ENST00000512068 STAG3L1P0CL83 205 aa8.69□□□□□ -1.02
HTT-209ENST00000512068 KRT5P13647 590 aa8.69□□□□□ -1.02
HTT-209ENST00000512068 DARSP14868 501 aaKnown RBP8.69□□□□□ -1.02
HTT-209ENST00000512068 ARF4P18085 180 aaPredicted RBP8.69□□□□□ -1.02
HTT-209ENST00000512068 TNFAIP3P21580 790 aa8.69□□□□□ -1.02
HTT-209ENST00000512068 PROZP22891 400 aa8.69□□□□□ -1.02
HTT-209ENST00000512068 EIF4BP23588 611 aaKnown RBP8.69□□□□□ -1.02
HTT-209ENST00000512068 TNFSF9P41273 254 aa8.69□□□□□ -1.02
HTT-209ENST00000512068 PDE6CP51160 858 aa8.69□□□□□ -1.02
HTT-209ENST00000512068 VAV2P52735 878 aa8.69□□□□□ -1.02
HTT-209ENST00000512068 CRYBB1P53674 252 aaPredicted RBP8.69□□□□□ -1.02
HTT-209ENST00000512068 NAP1L1P55209 391 aaKnown RBP8.69□□□□□ -1.02
HTT-209ENST00000512068 JAM2P57087 298 aa8.69□□□□□ -1.02
HTT-209ENST00000512068 GNG11P61952 73 aa8.69□□□□□ -1.02
HTT-209ENST00000512068 YWHAEP62258 255 aaKnown RBP8.69□□□□□ -1.02
HTT-209ENST00000512068 NKX3-2P78367 333 aa8.69□□□□□ -1.02
HTT-209ENST00000512068 MRPS6P82932 125 aaKnown RBP8.69□□□□□ -1.02
HTT-209ENST00000512068 POU5F1Q01860 360 aaKnown RBP8.69□□□□□ -1.02
HTT-209ENST00000512068 APBA1Q02410 837 aa8.69□□□□□ -1.02
HTT-209ENST00000512068 ZACNQ401N2 412 aa8.69□□□□□ -1.02
HTT-209ENST00000512068 SEZ6Q53EL9 994 aa8.69□□□□□ -1.02
HTT-209ENST00000512068 C1orf220Q5T0J3 134 aa8.69□□□□□ -1.02
HTT-209ENST00000512068 CCDC122Q5T0U0 273 aa8.69□□□□□ -1.02
HTT-209ENST00000512068 C10orf76Q5T2E6 689 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms