RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 PCDHB13Q9Y5F0 798 aa17.91■□□□□ 0.46
DDX41-213ENST00000512027 TIMM13Q9Y5L4 95 aaPredicted RBP17.91■□□□□ 0.46
DDX41-213ENST00000512027 TECTAO75443 2155 aa17.91■□□□□ 0.46
DDX41-213ENST00000512027 N4BP1O75113 896 aaKnown RBP17.9■□□□□ 0.46
DDX41-213ENST00000512027 ZMYND10O75800 440 aa17.9■□□□□ 0.46
DDX41-213ENST00000512027 ASGR2P07307 311 aa17.9■□□□□ 0.46
DDX41-213ENST00000512027 C8AP07357 584 aa17.9■□□□□ 0.46
DDX41-213ENST00000512027 PFKFB1P16118 471 aa17.9■□□□□ 0.46
DDX41-213ENST00000512027 RAB33AQ14088 237 aa17.9■□□□□ 0.46
DDX41-213ENST00000512027 TMEM132DQ14C87 1099 aa17.9■□□□□ 0.46
DDX41-213ENST00000512027 SPATA1Q5VX52 437 aa17.9■□□□□ 0.46
DDX41-213ENST00000512027 PDXDC1Q6P996 788 aa17.9■□□□□ 0.46
DDX41-213ENST00000512027 CCDC149Q6ZUS6 474 aa17.9■□□□□ 0.46
DDX41-213ENST00000512027 ANKS3Q6ZW76 656 aa17.9■□□□□ 0.46
DDX41-213ENST00000512027 EFCAB13Q8IY85 973 aa17.9■□□□□ 0.46
DDX41-213ENST00000512027 TDRD5Q8NAT2 981 aaKnown RBP17.9■□□□□ 0.46
DDX41-213ENST00000512027 SLC7A14Q8TBB6 771 aa17.9■□□□□ 0.46
DDX41-213ENST00000512027 C7orf25Q9BPX7 421 aa17.9■□□□□ 0.46
DDX41-213ENST00000512027 LRRC27Q9C0I9 530 aa17.9■□□□□ 0.46
DDX41-213ENST00000512027 SMOC2Q9H3U7 446 aa17.9■□□□□ 0.46
DDX41-213ENST00000512027 DPP7Q9UHL4 492 aa17.9■□□□□ 0.46
DDX41-213ENST00000512027 NR2E1Q9Y466 385 aa17.9■□□□□ 0.46
DDX41-213ENST00000512027 DOCK8Q8NF50 2099 aa17.9■□□□□ 0.46
DDX41-213ENST00000512027 CCL16O15467 120 aa17.89■□□□□ 0.45
DDX41-213ENST00000512027 ACTN4O43707 911 aaKnown RBP17.89■□□□□ 0.45
DDX41-213ENST00000512027 GPR37L1O60883 481 aa17.89■□□□□ 0.45
DDX41-213ENST00000512027 CYP3A5P20815 502 aa17.89■□□□□ 0.45
DDX41-213ENST00000512027 HOXD13P35453 343 aa17.89■□□□□ 0.45
DDX41-213ENST00000512027 NTHL1P78549 312 aa17.89■□□□□ 0.45
DDX41-213ENST00000512027 AMPD3Q01432 767 aa17.89■□□□□ 0.45
DDX41-213ENST00000512027 ROR1Q01973 937 aa17.89■□□□□ 0.45
DDX41-213ENST00000512027 ALCAMQ13740 583 aa17.89■□□□□ 0.45
DDX41-213ENST00000512027 BECN1Q14457 450 aa17.89■□□□□ 0.45
DDX41-213ENST00000512027 FAM26FQ5R3K3 315 aa17.89■□□□□ 0.45
DDX41-213ENST00000512027 LIN9Q5TKA1 542 aa17.89■□□□□ 0.45
DDX41-213ENST00000512027 ELMSAN1Q6PJG2 1045 aa17.89■□□□□ 0.45
DDX41-213ENST00000512027 BEST2Q8NFU1 509 aa17.89■□□□□ 0.45
DDX41-213ENST00000512027 HDAC7Q8WUI4 952 aa17.89■□□□□ 0.45
DDX41-213ENST00000512027 PRKD2Q9BZL6 878 aa17.89■□□□□ 0.45
DDX41-213ENST00000512027 PIDD1Q9HB75 910 aa17.89■□□□□ 0.45
DDX41-213ENST00000512027 FBXL5Q9UKA1 691 aa17.89■□□□□ 0.45
DDX41-213ENST00000512027 BACE2Q9Y5Z0 518 aa17.89■□□□□ 0.45
DDX41-213ENST00000512027 CLUHO75153 1309 aa17.89■□□□□ 0.45
DDX41-213ENST00000512027 WDR27A2RRH5 827 aa17.88■□□□□ 0.45
DDX41-213ENST00000512027 SYN3O14994 580 aa17.88■□□□□ 0.45
DDX41-213ENST00000512027 SPTLC1O15269 473 aa17.88■□□□□ 0.45
DDX41-213ENST00000512027 XPOTO43592 962 aaKnown RBP17.88■□□□□ 0.45
DDX41-213ENST00000512027 TBC1D4O60343 1298 aa17.88■□□□□ 0.45
DDX41-213ENST00000512027 COL9A1P20849 921 aa17.88■□□□□ 0.45
DDX41-213ENST00000512027 MRPL58Q14197 206 aaKnown RBP17.88■□□□□ 0.45
DDX41-213ENST00000512027 POSTNQ15063 836 aa17.88■□□□□ 0.45
DDX41-213ENST00000512027 PTPN21Q16825 1174 aa17.88■□□□□ 0.45
DDX41-213ENST00000512027 CTXN3Q4LDR2 81 aa17.88■□□□□ 0.45
DDX41-213ENST00000512027 PPM1LQ5SGD2 360 aa17.88■□□□□ 0.45
DDX41-213ENST00000512027 SCARA3Q6AZY7 606 aa17.88■□□□□ 0.45
DDX41-213ENST00000512027 CNNM4Q6P4Q7 775 aa17.88■□□□□ 0.45
DDX41-213ENST00000512027 UNC13DQ70J99 1090 aa17.88■□□□□ 0.45
DDX41-213ENST00000512027 CD302Q8IX05 232 aa17.88■□□□□ 0.45
DDX41-213ENST00000512027 NELFCDQ8IXH7 590 aa17.88■□□□□ 0.45
DDX41-213ENST00000512027 ASB7Q9H672 318 aa17.88■□□□□ 0.45
DDX41-213ENST00000512027 MAGEF1Q9HAY2 307 aa17.88■□□□□ 0.45
DDX41-213ENST00000512027 ZDHHC7Q9NXF8 308 aa17.88■□□□□ 0.45
DDX41-213ENST00000512027 LIMD1Q9UGP4 676 aa17.88■□□□□ 0.45
DDX41-213ENST00000512027 PCDHB8Q9UN66 801 aa17.88■□□□□ 0.45
DDX41-213ENST00000512027 NOTCH4Q99466 2003 aa17.88■□□□□ 0.45
DDX41-213ENST00000512027 M0QZQ0 153 aa17.87■□□□□ 0.45
DDX41-213ENST00000512027 C1RP00736 705 aa17.87■□□□□ 0.45
DDX41-213ENST00000512027 GARTP22102 1010 aa17.87■□□□□ 0.45
DDX41-213ENST00000512027 ZXDAP98168 799 aa17.87■□□□□ 0.45
DDX41-213ENST00000512027 EHHADHQ08426 723 aa17.87■□□□□ 0.45
DDX41-213ENST00000512027 C9orf57Q5W0N0 161 aa17.87■□□□□ 0.45
DDX41-213ENST00000512027 ARMCX5Q6P1M9 558 aa17.87■□□□□ 0.45
DDX41-213ENST00000512027 DSTYKQ6XUX3 929 aa17.87■□□□□ 0.45
DDX41-213ENST00000512027 EPM2AIP1Q7L775 607 aaPredicted RBP17.87■□□□□ 0.45
DDX41-213ENST00000512027 BRSK2Q8IWQ3 736 aa17.87■□□□□ 0.45
DDX41-213ENST00000512027 CEP57L1Q8IYX8 460 aa17.87■□□□□ 0.45
DDX41-213ENST00000512027 ST13P5Q8NFI4 369 aaPredicted RBP17.87■□□□□ 0.45
DDX41-213ENST00000512027 EDAQ92838 391 aa17.87■□□□□ 0.45
DDX41-213ENST00000512027 MYADMQ96S97 322 aa17.87■□□□□ 0.45
DDX41-213ENST00000512027 WDR6Q9NNW5 1121 aaKnown RBP17.87■□□□□ 0.45
DDX41-213ENST00000512027 SLC39A2Q9NP94 309 aa17.87■□□□□ 0.45
DDX41-213ENST00000512027 RBAKQ9NYW8 714 aaPredicted RBP17.87■□□□□ 0.45
DDX41-213ENST00000512027 POLIQ9UNA4 740 aa17.87■□□□□ 0.45
DDX41-213ENST00000512027 HPSEQ9Y251 543 aa17.87■□□□□ 0.45
DDX41-213ENST00000512027 KLRC4O43908 158 aa17.86■□□□□ 0.45
DDX41-213ENST00000512027 OR4Q2P0C623 313 aa17.86■□□□□ 0.45
DDX41-213ENST00000512027 SLFN14P0C7P3 912 aa17.86■□□□□ 0.45
DDX41-213ENST00000512027 CMA1P23946 247 aa17.86■□□□□ 0.45
DDX41-213ENST00000512027 GBP2P32456 591 aaPredicted RBP17.86■□□□□ 0.45
DDX41-213ENST00000512027 AARSP49588 968 aaKnown RBP eCLIP17.86■□□□□ 0.45
DDX41-213ENST00000512027 LMBRD2Q68DH5 695 aaPredicted RBP17.86■□□□□ 0.45
DDX41-213ENST00000512027 SLC8B1Q6J4K2 584 aa17.86■□□□□ 0.45
DDX41-213ENST00000512027 ZNF280DQ6N043 979 aa17.86■□□□□ 0.45
DDX41-213ENST00000512027 GET4Q7L5D6 327 aaPredicted RBP17.86■□□□□ 0.45
DDX41-213ENST00000512027 GRASPQ7Z6J2 395 aaPredicted RBP17.86■□□□□ 0.45
DDX41-213ENST00000512027 PAGE5Q96GU1 130 aa17.86■□□□□ 0.45
DDX41-213ENST00000512027 GOLPH3LQ9H4A5 285 aa17.86■□□□□ 0.45
DDX41-213ENST00000512027 TMEM206Q9H813 350 aa17.86■□□□□ 0.45
DDX41-213ENST00000512027 HCFC1R1Q9NWW0 138 aa17.86■□□□□ 0.45
DDX41-213ENST00000512027 DPP3Q9NY33 737 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms