RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 POTECB2RU33 542 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 ZEB2O60315 1214 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 KERAO60938 352 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 GLRX3O76003 335 aaKnown RBP5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 PDGFAP04085 211 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 ATP5BP06576 529 aaKnown RBP5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 ALAS2P22557 587 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 EPHX2P34913 555 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 VPS41P49754 854 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 HNMTP50135 292 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 COG7P83436 770 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 ADAM15Q13444 863 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 LAMB3Q13751 1172 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 MAP7Q14244 749 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 PRR16Q569H4 304 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 TPGS2Q68CL5 300 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 OTUD7BQ6GQQ9 843 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 TTBK2Q6IQ55 1244 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 TMEM154Q6P9G4 183 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 ZNF783Q6ZMS7 281 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 MEX3BQ6ZN04 569 aaKnown RBP5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 C7orf57Q8NEG2 295 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 CEP70Q8NHQ1 597 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 DHX58Q96C10 678 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 EDC3Q96F86 508 aaKnown RBP5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 RHOVQ96L33 236 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 TTC25Q96NG3 672 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 TREX2Q9BQ50 279 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 SORBS1Q9BX66 1292 aaKnown RBP5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 HACL1Q9UJ83 578 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 RPS6KA6Q9UK32 745 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 LRFN2Q9ULH4 789 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 ZKSCAN5Q9Y2L8 839 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 PCDHB12Q9Y5F1 795 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 PCDHGB2Q9Y5G2 931 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 SCN9AQ15858 1988 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 GAKO14976 1311 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 IRS2Q9Y4H2 1338 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 ZNF609O15014 1411 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 H7C1D1 291 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 MAN1A2O60476 641 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 KCNJ13O60928 360 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 GJB3O75712 270 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 SLU7O95391 586 aaKnown RBP5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 ZBED1O96006 694 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 PLATP00750 562 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 PSAPP07602 524 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 HEXBP07686 556 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 IL1R1P14778 569 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 KELP23276 732 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 PSMA4P25789 261 aaKnown RBP5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 PRDX5P30044 214 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 MCAMP43121 646 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 DIO1P49895 249 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 ALDH3A2P51648 485 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 MRPS5P82675 430 aaKnown RBP5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 GALNT1Q10472 559 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 COASYQ13057 564 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 SLC14A1Q13336 389 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 KBTBD12Q3ZCT8 623 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 SNAP47Q5SQN1 464 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 TMEM240Q5SV17 173 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 STRIP1Q5VSL9 837 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 MAP1SQ66K74 1059 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 SLC22A25Q6T423 547 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 RUFY4Q6ZNE9 571 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 B4GALNT4Q76KP1 1039 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 EXOC4Q96A65 974 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 CCDC74AQ96AQ1 378 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 TRIM47Q96LD4 638 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 BRD8Q9H0E9 1235 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 BOLA2Q9H3K6 86 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 THAP9Q9H5L6 903 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 DCTPP1Q9H773 170 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 INTS7Q9NVH2 962 aaKnown RBP5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 TBCCD1Q9NVR7 557 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 GPRC5DQ9NZD1 345 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 MARK1Q9P0L2 795 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 HMG20BQ9P0W2 317 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 CHORDC1Q9UHD1 332 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 CCPG1Q9ULG6 757 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 SPO11Q9Y5K1 396 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 COL1A1P02452 1464 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 CLRN2A0PK11 232 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 GREM1O60565 184 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 DIAPH2O60879 1101 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 ERLIN1O75477 346 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 PF4P02776 101 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 SNRNP70P08621 437 aaKnown RBP5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 PORP16435 677 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 ALOX12P18054 663 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 PAMP19021 973 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 CDH3P22223 829 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 CACNB3P54284 484 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 GSCP56915 257 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 TUBA1BP68363 451 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 IFI35P80217 286 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 LRMPQ12912 555 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 BMPR2Q13873 1038 aa5.38□□□□□ -1.55
TRAPPC11-208ENST00000511955 PDIA5Q14554 519 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms