RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 C3orf58Q8NDZ4 430 aa13.9□□□□□ -0.18
COL6A6-203ENST00000511332 MAFAQ8NHW3 353 aaPredicted RBP13.9□□□□□ -0.18
COL6A6-203ENST00000511332 CCDC127Q96BQ5 260 aa13.9□□□□□ -0.18
COL6A6-203ENST00000511332 MRPL17Q9NRX2 175 aaKnown RBP13.9□□□□□ -0.18
COL6A6-203ENST00000511332 INTS13Q9NVM9 706 aa13.9□□□□□ -0.18
COL6A6-203ENST00000511332 R3HCC1Q9Y3T6 440 aaKnown RBP13.9□□□□□ -0.18
COL6A6-203ENST00000511332 IRAK3Q9Y616 596 aa13.9□□□□□ -0.18
COL6A6-203ENST00000511332 ANO9A1A5B4 782 aa13.89□□□□□ -0.19
COL6A6-203ENST00000511332 ARHGEF37A1IGU5 675 aa13.89□□□□□ -0.19
COL6A6-203ENST00000511332 AKAP3O75969 853 aa13.89□□□□□ -0.19
COL6A6-203ENST00000511332 ITGB3P05106 788 aa13.89□□□□□ -0.19
COL6A6-203ENST00000511332 IRS1P35568 1242 aa13.89□□□□□ -0.19
COL6A6-203ENST00000511332 GUCY2FP51841 1108 aa13.89□□□□□ -0.19
COL6A6-203ENST00000511332 AP3M2P53677 418 aa13.89□□□□□ -0.19
COL6A6-203ENST00000511332 PMS1P54277 932 aaKnown RBP13.89□□□□□ -0.19
COL6A6-203ENST00000511332 NLRP12P59046 1061 aa13.89□□□□□ -0.19
COL6A6-203ENST00000511332 ERVFC1P60507 584 aa13.89□□□□□ -0.19
COL6A6-203ENST00000511332 DSG1Q02413 1049 aa13.89□□□□□ -0.19
COL6A6-203ENST00000511332 PTPN14Q15678 1187 aa13.89□□□□□ -0.19
COL6A6-203ENST00000511332 SV2CQ496J9 727 aa13.89□□□□□ -0.19
COL6A6-203ENST00000511332 TTI2Q6NXR4 508 aa13.89□□□□□ -0.19
COL6A6-203ENST00000511332 LRRC52Q8N7C0 313 aa13.89□□□□□ -0.19
COL6A6-203ENST00000511332 TMC2Q8TDI7 906 aa13.89□□□□□ -0.19
COL6A6-203ENST00000511332 PARD3BQ8TEW8 1205 aa13.89□□□□□ -0.19
COL6A6-203ENST00000511332 SUSD3Q96L08 255 aa13.89□□□□□ -0.19
COL6A6-203ENST00000511332 CEP63Q96MT8 703 aa13.89□□□□□ -0.19
COL6A6-203ENST00000511332 CDCA3Q99618 268 aaPredicted RBP13.89□□□□□ -0.19
COL6A6-203ENST00000511332 TTPALQ9BTX7 342 aa13.89□□□□□ -0.19
COL6A6-203ENST00000511332 GPR62Q9BZJ7 368 aa13.89□□□□□ -0.19
COL6A6-203ENST00000511332 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.89□□□□□ -0.19
COL6A6-203ENST00000511332 RWDD2AQ9UIY3 292 aa13.89□□□□□ -0.19
COL6A6-203ENST00000511332 PTPRJQ12913 1337 aa13.89□□□□□ -0.19
COL6A6-203ENST00000511332 LRRIQ3A6PVS8 624 aaPredicted RBP13.88□□□□□ -0.19
COL6A6-203ENST00000511332 PIRO00625 290 aa13.88□□□□□ -0.19
COL6A6-203ENST00000511332 SYN3O14994 580 aa13.88□□□□□ -0.19
COL6A6-203ENST00000511332 NCK2O43639 380 aa13.88□□□□□ -0.19
COL6A6-203ENST00000511332 FGFR1OPO95684 399 aaKnown RBP13.88□□□□□ -0.19
COL6A6-203ENST00000511332 POLR2BP30876 1174 aaKnown RBP13.88□□□□□ -0.19
COL6A6-203ENST00000511332 AARSP49588 968 aaKnown RBP eCLIP13.88□□□□□ -0.19
COL6A6-203ENST00000511332 TAF6P49848 677 aa13.88□□□□□ -0.19
COL6A6-203ENST00000511332 VAMP7P51809 220 aa13.88□□□□□ -0.19
COL6A6-203ENST00000511332 CLDN10P78369 228 aa13.88□□□□□ -0.19
COL6A6-203ENST00000511332 BFSP1Q12934 665 aa13.88□□□□□ -0.19
COL6A6-203ENST00000511332 DPCR1Q3MIW9 517 aa13.88□□□□□ -0.19
COL6A6-203ENST00000511332 TCEAL5Q5H9L2 206 aa13.88□□□□□ -0.19
COL6A6-203ENST00000511332 FAM171A1Q5VUB5 890 aa13.88□□□□□ -0.19
COL6A6-203ENST00000511332 LMBRD2Q68DH5 695 aaPredicted RBP13.88□□□□□ -0.19
COL6A6-203ENST00000511332 CAVIN1Q6NZI2 390 aaKnown RBP13.88□□□□□ -0.19
COL6A6-203ENST00000511332 SASS6Q6UVJ0 657 aa13.88□□□□□ -0.19
COL6A6-203ENST00000511332 CSGALNACT2Q8N6G5 542 aa13.88□□□□□ -0.19
COL6A6-203ENST00000511332 MRPL43Q8N983 215 aaKnown RBP13.88□□□□□ -0.19
COL6A6-203ENST00000511332 C1orf127Q8N9H9 656 aa13.88□□□□□ -0.19
COL6A6-203ENST00000511332 EMILIN2Q9BXX0 1053 aa13.88□□□□□ -0.19
COL6A6-203ENST00000511332 CHST7Q9NS84 486 aa13.88□□□□□ -0.19
COL6A6-203ENST00000511332 MYO7AQ13402 2215 aa13.88□□□□□ -0.19
COL6A6-203ENST00000511332 C2orf71A6NGG8 1288 aa13.87□□□□□ -0.19
COL6A6-203ENST00000511332 PPEF2O14830 753 aa13.87□□□□□ -0.19
COL6A6-203ENST00000511332 IKBKBO14920 756 aa13.87□□□□□ -0.19
COL6A6-203ENST00000511332 STX10O60499 249 aa13.87□□□□□ -0.19
COL6A6-203ENST00000511332 CXCL14O95715 111 aa13.87□□□□□ -0.19
COL6A6-203ENST00000511332 KRT19P08727 400 aa13.87□□□□□ -0.19
COL6A6-203ENST00000511332 SRGAP2BP0DMP2 458 aa13.87□□□□□ -0.19
COL6A6-203ENST00000511332 ODC1P11926 461 aa13.87□□□□□ -0.19
COL6A6-203ENST00000511332 FGFR3P22607 806 aa13.87□□□□□ -0.19
COL6A6-203ENST00000511332 BRCC3P46736 316 aa13.87□□□□□ -0.19
COL6A6-203ENST00000511332 LILRA4P59901 499 aa13.87□□□□□ -0.19
COL6A6-203ENST00000511332 RBP5P82980 135 aa13.87□□□□□ -0.19
COL6A6-203ENST00000511332 MYO1EQ12965 1108 aa13.87□□□□□ -0.19
COL6A6-203ENST00000511332 STX1AQ16623 288 aa13.87□□□□□ -0.19
COL6A6-203ENST00000511332 SKOR2Q2VWA4 1001 aaPredicted RBP13.87□□□□□ -0.19
COL6A6-203ENST00000511332 CT47A1Q5JQC4 288 aaPredicted RBP13.87□□□□□ -0.19
COL6A6-203ENST00000511332 CD300LGQ6UXG3 332 aa13.87□□□□□ -0.19
COL6A6-203ENST00000511332 ANKS3Q6ZW76 656 aa13.87□□□□□ -0.19
COL6A6-203ENST00000511332 TRAPPC11Q7Z392 1133 aa13.87□□□□□ -0.19
COL6A6-203ENST00000511332 ADGRD2Q7Z7M1 963 aa13.87□□□□□ -0.19
COL6A6-203ENST00000511332 CEP57Q86XR8 500 aa13.87□□□□□ -0.19
COL6A6-203ENST00000511332 APPL2Q8NEU8 664 aa13.87□□□□□ -0.19
COL6A6-203ENST00000511332 OR5B17Q8NGF7 314 aa13.87□□□□□ -0.19
COL6A6-203ENST00000511332 AUTS2Q8WXX7 1259 aa13.87□□□□□ -0.19
COL6A6-203ENST00000511332 RIN2Q8WYP3 895 aaPredicted RBP13.87□□□□□ -0.19
COL6A6-203ENST00000511332 PIK3R5Q8WYR1 880 aa13.87□□□□□ -0.19
COL6A6-203ENST00000511332 GZF1Q9H116 711 aaPredicted RBP13.87□□□□□ -0.19
COL6A6-203ENST00000511332 TLE6Q9H808 572 aa13.87□□□□□ -0.19
COL6A6-203ENST00000511332 METTL14Q9HCE5 456 aaKnown RBP13.87□□□□□ -0.19
COL6A6-203ENST00000511332 TMEM63CQ9P1W3 806 aa13.87□□□□□ -0.19
COL6A6-203ENST00000511332 PCDHB8Q9UN66 801 aa13.87□□□□□ -0.19
COL6A6-203ENST00000511332 AGAP1Q9UPQ3 857 aa13.87□□□□□ -0.19
COL6A6-203ENST00000511332 PCDHGC5Q9Y5F6 944 aa13.87□□□□□ -0.19
COL6A6-203ENST00000511332 HIDE1A8MVS5 230 aa13.86□□□□□ -0.19
COL6A6-203ENST00000511332 I3L4J1 428 aa13.86□□□□□ -0.19
COL6A6-203ENST00000511332 M0QZQ0 153 aa13.86□□□□□ -0.19
COL6A6-203ENST00000511332 C2CD2LO14523 706 aa13.86□□□□□ -0.19
COL6A6-203ENST00000511332 GNA14O95837 355 aa13.86□□□□□ -0.19
COL6A6-203ENST00000511332 ADH1AP07327 375 aa13.86□□□□□ -0.19
COL6A6-203ENST00000511332 ERCC5P28715 1186 aaPredicted RBP13.86□□□□□ -0.19
COL6A6-203ENST00000511332 TKTP29401 623 aaKnown RBP13.86□□□□□ -0.19
COL6A6-203ENST00000511332 NRIP1P48552 1158 aa13.86□□□□□ -0.19
COL6A6-203ENST00000511332 STX17P56962 302 aa13.86□□□□□ -0.19
COL6A6-203ENST00000511332 BIRC3Q13489 604 aa13.86□□□□□ -0.19
COL6A6-203ENST00000511332 PSMD5Q16401 504 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms