RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 MTCH2Q9Y6C9 303 aa6.93□□□□□ -1.3
GYPB-212ENST00000511198 ZFYVE26Q68DK2 2539 aa6.93□□□□□ -1.3
GYPB-212ENST00000511198 SLC12A8A0AV02 714 aa6.92□□□□□ -1.3
GYPB-212ENST00000511198 PRR23AA6NEV1 266 aa6.92□□□□□ -1.3
GYPB-212ENST00000511198 CYSRT1A8MQ03 144 aa6.92□□□□□ -1.3
GYPB-212ENST00000511198 APPP05067 770 aa6.92□□□□□ -1.3
GYPB-212ENST00000511198 CCND3P30281 292 aaPredicted RBP6.92□□□□□ -1.3
GYPB-212ENST00000511198 ETV4P43268 484 aa6.92□□□□□ -1.3
GYPB-212ENST00000511198 MECP2P51608 486 aaKnown RBP6.92□□□□□ -1.3
GYPB-212ENST00000511198 FNDC3BQ53EP0 1204 aaKnown RBP6.92□□□□□ -1.3
GYPB-212ENST00000511198 KANK2Q63ZY3 851 aa6.92□□□□□ -1.3
GYPB-212ENST00000511198 KRT40Q6A162 431 aa6.92□□□□□ -1.3
GYPB-212ENST00000511198 KIF6Q6ZMV9 814 aa6.92□□□□□ -1.3
GYPB-212ENST00000511198 DGLUCYQ7Z3D6 616 aa6.92□□□□□ -1.3
GYPB-212ENST00000511198 RMDN1Q96DB5 314 aa6.92□□□□□ -1.3
GYPB-212ENST00000511198 GNRHR2Q96P88 292 aa6.92□□□□□ -1.3
GYPB-212ENST00000511198 VEZTQ9HBM0 779 aa6.92□□□□□ -1.3
GYPB-212ENST00000511198 MYO3BQ8WXR4 1341 aa6.92□□□□□ -1.3
GYPB-212ENST00000511198 ECM29Q5VYK3 1845 aa6.92□□□□□ -1.3
GYPB-212ENST00000511198 FOXP2O15409 715 aa6.91□□□□□ -1.3
GYPB-212ENST00000511198 HMOX1P09601 288 aa6.91□□□□□ -1.3
GYPB-212ENST00000511198 POU3F3P20264 500 aaPredicted RBP6.91□□□□□ -1.3
GYPB-212ENST00000511198 ADCY8P40145 1251 aa6.91□□□□□ -1.3
GYPB-212ENST00000511198 RPS8P62241 208 aaKnown RBP6.91□□□□□ -1.3
GYPB-212ENST00000511198 EIF4HQ15056 248 aaKnown RBP6.91□□□□□ -1.3
GYPB-212ENST00000511198 CATSPEREQ5SY80 951 aa6.91□□□□□ -1.3
GYPB-212ENST00000511198 SLC39A5Q6ZMH5 540 aa6.91□□□□□ -1.3
GYPB-212ENST00000511198 Q8TCH9 128 aa6.91□□□□□ -1.3
GYPB-212ENST00000511198 ATOH1Q92858 354 aaPredicted RBP6.91□□□□□ -1.3
GYPB-212ENST00000511198 COA7Q96BR5 231 aa6.91□□□□□ -1.3
GYPB-212ENST00000511198 GBP4Q96PP9 640 aa6.91□□□□□ -1.3
GYPB-212ENST00000511198 LMF1Q96S06 567 aa6.91□□□□□ -1.3
GYPB-212ENST00000511198 KLC2Q9H0B6 622 aa6.91□□□□□ -1.3
GYPB-212ENST00000511198 OR10A5Q9H207 317 aa6.91□□□□□ -1.3
GYPB-212ENST00000511198 RRP7AQ9Y3A4 280 aaKnown RBP6.91□□□□□ -1.3
GYPB-212ENST00000511198 ASB1Q9Y576 335 aa6.91□□□□□ -1.3
GYPB-212ENST00000511198 AK9Q5TCS8 1911 aa6.91□□□□□ -1.3
GYPB-212ENST00000511198 PLXNB2O15031 1838 aa6.9□□□□□ -1.3
GYPB-212ENST00000511198 RLFQ13129 1914 aa6.9□□□□□ -1.3
GYPB-212ENST00000511198 GOLGA6L22H0YM25 854 aa6.9□□□□□ -1.3
GYPB-212ENST00000511198 TNFRSF1AP19438 455 aa6.9□□□□□ -1.3
GYPB-212ENST00000511198 CD83Q01151 205 aa6.9□□□□□ -1.3
GYPB-212ENST00000511198 TMEM132BQ14DG7 1078 aa6.9□□□□□ -1.3
GYPB-212ENST00000511198 SF3B3Q15393 1217 aaKnown RBP6.9□□□□□ -1.3
GYPB-212ENST00000511198 RNF151Q2KHN1 245 aa6.9□□□□□ -1.3
GYPB-212ENST00000511198 TRIM60Q495X7 471 aa6.9□□□□□ -1.3
GYPB-212ENST00000511198 TCTN3Q6NUS6 607 aa6.9□□□□□ -1.3
GYPB-212ENST00000511198 ZCCHC8Q6NZY4 707 aaKnown RBP6.9□□□□□ -1.3
GYPB-212ENST00000511198 LARP4Q71RC2 724 aaKnown RBP eCLIP6.9□□□□□ -1.3
GYPB-212ENST00000511198 NEIL1Q96FI4 390 aaPredicted RBP6.9□□□□□ -1.3
GYPB-212ENST00000511198 MRFAP1L1Q96HT8 127 aa6.9□□□□□ -1.3
GYPB-212ENST00000511198 DRC1Q96MC2 740 aa6.9□□□□□ -1.3
GYPB-212ENST00000511198 LRRC37BQ96QE4 947 aa6.9□□□□□ -1.3
GYPB-212ENST00000511198 PARK7Q99497 189 aaKnown RBP6.9□□□□□ -1.3
GYPB-212ENST00000511198 ZSWIM4Q9H7M6 989 aa6.9□□□□□ -1.3
GYPB-212ENST00000511198 FBXO10Q9UK96 956 aa6.9□□□□□ -1.3
GYPB-212ENST00000511198 TSC22D4Q9Y3Q8 395 aa6.9□□□□□ -1.3
GYPB-212ENST00000511198 TECTAO75443 2155 aa6.89□□□□□ -1.31
GYPB-212ENST00000511198 BRWD1Q9NSI6 2320 aa6.89□□□□□ -1.31
GYPB-212ENST00000511198 FRYLO94915 3013 aa6.89□□□□□ -1.31
GYPB-212ENST00000511198 PPP1R12AO14974 1030 aaPredicted RBP6.89□□□□□ -1.31
GYPB-212ENST00000511198 MATN3O15232 486 aa6.89□□□□□ -1.31
GYPB-212ENST00000511198 FOXS1O43638 330 aa6.89□□□□□ -1.31
GYPB-212ENST00000511198 ZNF623O75123 536 aa6.89□□□□□ -1.31
GYPB-212ENST00000511198 DNAJC8O75937 253 aaPredicted RBP6.89□□□□□ -1.31
GYPB-212ENST00000511198 GLRX3O76003 335 aaKnown RBP6.89□□□□□ -1.31
GYPB-212ENST00000511198 MYL6BP14649 208 aa6.89□□□□□ -1.31
GYPB-212ENST00000511198 RRADP55042 308 aa6.89□□□□□ -1.31
GYPB-212ENST00000511198 IRF9Q00978 393 aa6.89□□□□□ -1.31
GYPB-212ENST00000511198 PPATQ06203 517 aa6.89□□□□□ -1.31
GYPB-212ENST00000511198 NOLC1Q14978 699 aaKnown RBP eCLIP6.89□□□□□ -1.31
GYPB-212ENST00000511198 TBR1Q16650 682 aa6.89□□□□□ -1.31
GYPB-212ENST00000511198 CCDC144BQ3MJ40 725 aa6.89□□□□□ -1.31
GYPB-212ENST00000511198 CFAP100Q494V2 611 aa6.89□□□□□ -1.31
GYPB-212ENST00000511198 TMEM200BQ69YZ2 307 aa6.89□□□□□ -1.31
GYPB-212ENST00000511198 TRIM68Q6AZZ1 485 aa6.89□□□□□ -1.31
GYPB-212ENST00000511198 TTLL5Q6EMB2 1281 aa6.89□□□□□ -1.31
GYPB-212ENST00000511198 ZNF585AQ6P3V2 769 aa6.89□□□□□ -1.31
GYPB-212ENST00000511198 CERS5Q8N5B7 392 aa6.89□□□□□ -1.31
GYPB-212ENST00000511198 FOXRED1Q96CU9 486 aaPredicted RBP6.89□□□□□ -1.31
GYPB-212ENST00000511198 SCYL1Q96KG9 808 aa6.89□□□□□ -1.31
GYPB-212ENST00000511198 PRRX2Q99811 253 aa6.89□□□□□ -1.31
GYPB-212ENST00000511198 BOCQ9BWV1 1114 aa6.89□□□□□ -1.31
GYPB-212ENST00000511198 TMEM39BQ9GZU3 492 aa6.89□□□□□ -1.31
GYPB-212ENST00000511198 SAMD15Q9P1V8 674 aa6.89□□□□□ -1.31
GYPB-212ENST00000511198 TRMT112Q9UI30 125 aaKnown RBP6.89□□□□□ -1.31
GYPB-212ENST00000511198 CDC42EP3Q9UKI2 254 aa6.89□□□□□ -1.31
GYPB-212ENST00000511198 GAKO14976 1311 aa6.89□□□□□ -1.31
GYPB-212ENST00000511198 FRMPD3Q5JV73 1810 aa6.89□□□□□ -1.31
GYPB-212ENST00000511198 BPTFQ12830 3046 aa6.89□□□□□ -1.31
GYPB-212ENST00000511198 GBF1Q92538 1859 aa6.88□□□□□ -1.31
GYPB-212ENST00000511198 SH3TC1Q8TE82 1336 aa6.88□□□□□ -1.31
GYPB-212ENST00000511198 M0R2C6 588 aa6.88□□□□□ -1.31
GYPB-212ENST00000511198 MATN2O00339 956 aa6.88□□□□□ -1.31
GYPB-212ENST00000511198 IL9P15248 144 aa6.88□□□□□ -1.31
GYPB-212ENST00000511198 IGFALSP35858 605 aa6.88□□□□□ -1.31
GYPB-212ENST00000511198 FPGSQ05932 587 aa6.88□□□□□ -1.31
GYPB-212ENST00000511198 ZMAT1Q5H9K5 638 aa6.88□□□□□ -1.31
GYPB-212ENST00000511198 BMP8AQ7Z5Y6 402 aa6.88□□□□□ -1.31
GYPB-212ENST00000511198 TAX1BP1Q86VP1 789 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms