RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 TSPAN18Q96SJ8 248 aa19.51■□□□□ 0.71
TPM3-220ENST00000509601 DNMT3BQ9UBC3 853 aaKnown RBP19.51■□□□□ 0.71
TPM3-220ENST00000509601 PCDHB8Q9UN66 801 aa19.51■□□□□ 0.71
TPM3-220ENST00000509601 FRMD3A2A2Y4 597 aa19.5■□□□□ 0.71
TPM3-220ENST00000509601 ANHXE9PGG2 379 aa19.5■□□□□ 0.71
TPM3-220ENST00000509601 H7C4K7 107 aa19.5■□□□□ 0.71
TPM3-220ENST00000509601 SPTLC2O15270 562 aa19.5■□□□□ 0.71
TPM3-220ENST00000509601 PPP6R2O75170 966 aa19.5■□□□□ 0.71
TPM3-220ENST00000509601 MCM4P33991 863 aa19.5■□□□□ 0.71
TPM3-220ENST00000509601 AARSP49588 968 aaKnown RBP eCLIP19.5■□□□□ 0.71
TPM3-220ENST00000509601 ACOT2P49753 483 aa19.5■□□□□ 0.71
TPM3-220ENST00000509601 SPATA1Q5VX52 437 aa19.5■□□□□ 0.71
TPM3-220ENST00000509601 ADALQ6DHV7 355 aa19.5■□□□□ 0.71
TPM3-220ENST00000509601 SLFN12LQ6IEE8 588 aa19.5■□□□□ 0.71
TPM3-220ENST00000509601 CRELD2Q6UXH1 353 aaPredicted RBP19.5■□□□□ 0.71
TPM3-220ENST00000509601 GET4Q7L5D6 327 aaPredicted RBP19.5■□□□□ 0.71
TPM3-220ENST00000509601 CD302Q8IX05 232 aa19.5■□□□□ 0.71
TPM3-220ENST00000509601 APPL2Q8NEU8 664 aa19.5■□□□□ 0.71
TPM3-220ENST00000509601 HCFC1R1Q9NWW0 138 aa19.5■□□□□ 0.71
TPM3-220ENST00000509601 TBC1D7Q9P0N9 293 aa19.5■□□□□ 0.71
TPM3-220ENST00000509601 SEL1LQ9UBV2 794 aa19.5■□□□□ 0.71
TPM3-220ENST00000509601 POLIQ9UNA4 740 aa19.5■□□□□ 0.71
TPM3-220ENST00000509601 DUSP12Q9UNI6 340 aa19.5■□□□□ 0.71
TPM3-220ENST00000509601 ARHGEF37A1IGU5 675 aa19.49■□□□□ 0.71
TPM3-220ENST00000509601 PPEF2O14830 753 aa19.49■□□□□ 0.71
TPM3-220ENST00000509601 XYLBO75191 536 aa19.49■□□□□ 0.71
TPM3-220ENST00000509601 OAZ2O95190 189 aa19.49■□□□□ 0.71
TPM3-220ENST00000509601 SEC24AO95486 1093 aa19.49■□□□□ 0.71
TPM3-220ENST00000509601 ATF2P15336 505 aa19.49■□□□□ 0.71
TPM3-220ENST00000509601 GAP43P17677 238 aa19.49■□□□□ 0.71
TPM3-220ENST00000509601 HOXD11P31277 338 aaPredicted RBP19.49■□□□□ 0.71
TPM3-220ENST00000509601 STAT6P42226 847 aa19.49■□□□□ 0.71
TPM3-220ENST00000509601 ARPP19P56211 112 aa19.49■□□□□ 0.71
TPM3-220ENST00000509601 NHLH1Q02575 133 aa19.49■□□□□ 0.71
TPM3-220ENST00000509601 CTXN3Q4LDR2 81 aa19.49■□□□□ 0.71
TPM3-220ENST00000509601 FOXD4L5Q5VV16 416 aaPredicted RBP19.49■□□□□ 0.71
TPM3-220ENST00000509601 JADE1Q6IE81 842 aa19.49■□□□□ 0.71
TPM3-220ENST00000509601 PDILTQ8N807 584 aa19.49■□□□□ 0.71
TPM3-220ENST00000509601 ST13P5Q8NFI4 369 aaPredicted RBP19.49■□□□□ 0.71
TPM3-220ENST00000509601 ITFG1Q8TB96 612 aa19.49■□□□□ 0.71
TPM3-220ENST00000509601 FOXD4L4Q8WXT5 416 aaPredicted RBP19.49■□□□□ 0.71
TPM3-220ENST00000509601 NXPE3Q969Y0 559 aa19.49■□□□□ 0.71
TPM3-220ENST00000509601 FAM212AQ96EL1 285 aa19.49■□□□□ 0.71
TPM3-220ENST00000509601 ZNF396Q96N95 335 aaPredicted RBP19.49■□□□□ 0.71
TPM3-220ENST00000509601 RPP25Q9BUL9 199 aaKnown RBP19.49■□□□□ 0.71
TPM3-220ENST00000509601 MRPL44Q9H9J2 332 aaKnown RBP19.49■□□□□ 0.71
TPM3-220ENST00000509601 AGO2Q9UKV8 859 aaKnown RBP19.49■□□□□ 0.71
TPM3-220ENST00000509601 TIMM13Q9Y5L4 95 aaPredicted RBP19.49■□□□□ 0.71
TPM3-220ENST00000509601 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.49■□□□□ 0.71
TPM3-220ENST00000509601 GTF3C3Q9Y5Q9 886 aa19.49■□□□□ 0.71
TPM3-220ENST00000509601 PIEZO1Q92508 2521 aa19.48■□□□□ 0.71
TPM3-220ENST00000509601 NPR3P17342 541 aa19.48■□□□□ 0.71
TPM3-220ENST00000509601 CASP5P51878 434 aa19.48■□□□□ 0.71
TPM3-220ENST00000509601 TCF15Q12870 199 aa19.48■□□□□ 0.71
TPM3-220ENST00000509601 E2F4Q16254 413 aa19.48■□□□□ 0.71
TPM3-220ENST00000509601 POTEHQ6S545 545 aa19.48■□□□□ 0.71
TPM3-220ENST00000509601 HSCBQ8IWL3 235 aa19.48■□□□□ 0.71
TPM3-220ENST00000509601 TCEAL8Q8IYN2 117 aa19.48■□□□□ 0.71
TPM3-220ENST00000509601 HVCN1Q96D96 273 aa19.48■□□□□ 0.71
TPM3-220ENST00000509601 FGFBP2Q9BYJ0 223 aa19.48■□□□□ 0.71
TPM3-220ENST00000509601 ASB7Q9H672 318 aa19.48■□□□□ 0.71
TPM3-220ENST00000509601 OLFML3Q9NRN5 406 aa19.48■□□□□ 0.71
TPM3-220ENST00000509601 CDH7Q9ULB5 785 aa19.48■□□□□ 0.71
TPM3-220ENST00000509601 ZFP37Q9Y6Q3 630 aaPredicted RBP19.48■□□□□ 0.71
TPM3-220ENST00000509601 CACNA1HO95180 2353 aa19.47■□□□□ 0.71
TPM3-220ENST00000509601 PIRO00625 290 aa19.47■□□□□ 0.71
TPM3-220ENST00000509601 SPTLC1O15269 473 aa19.47■□□□□ 0.71
TPM3-220ENST00000509601 XPOTO43592 962 aaKnown RBP19.47■□□□□ 0.71
TPM3-220ENST00000509601 NFICP08651 508 aa19.47■□□□□ 0.71
TPM3-220ENST00000509601 ZSCAN22P10073 491 aaPredicted RBP19.47■□□□□ 0.71
TPM3-220ENST00000509601 LILRA4P59901 499 aa19.47■□□□□ 0.71
TPM3-220ENST00000509601 POU5F1Q01860 360 aaKnown RBP19.47■□□□□ 0.71
TPM3-220ENST00000509601 HTR4Q13639 388 aa19.47■□□□□ 0.71
TPM3-220ENST00000509601 L1TD1Q5T7N2 865 aaKnown RBP19.47■□□□□ 0.71
TPM3-220ENST00000509601 TPGS2Q68CL5 300 aa19.47■□□□□ 0.71
TPM3-220ENST00000509601 ZNF280DQ6N043 979 aa19.47■□□□□ 0.71
TPM3-220ENST00000509601 SHC4Q6S5L8 630 aa19.47■□□□□ 0.71
TPM3-220ENST00000509601 TMEM105Q8N8V8 129 aa19.47■□□□□ 0.71
TPM3-220ENST00000509601 ZSWIM2Q8NEG5 633 aa19.47■□□□□ 0.71
TPM3-220ENST00000509601 FGF13Q92913 245 aa19.47■□□□□ 0.71
TPM3-220ENST00000509601 ACCSQ96QU6 501 aa19.47■□□□□ 0.71
TPM3-220ENST00000509601 PANK4Q9NVE7 773 aa19.47■□□□□ 0.71
TPM3-220ENST00000509601 DERAQ9Y315 318 aa19.47■□□□□ 0.71
TPM3-220ENST00000509601 KMT2EQ8IZD2 1858 aa19.47■□□□□ 0.71
TPM3-220ENST00000509601 ANO9A1A5B4 782 aa19.46■□□□□ 0.71
TPM3-220ENST00000509601 YEATS4O95619 227 aa19.46■□□□□ 0.71
TPM3-220ENST00000509601 PDIA4P13667 645 aaKnown RBP19.46■□□□□ 0.71
TPM3-220ENST00000509601 IDEP14735 1019 aa19.46■□□□□ 0.71
TPM3-220ENST00000509601 ELF1P32519 619 aa19.46■□□□□ 0.71
TPM3-220ENST00000509601 PKP1Q13835 747 aa19.46■□□□□ 0.71
TPM3-220ENST00000509601 POSTNQ15063 836 aa19.46■□□□□ 0.71
TPM3-220ENST00000509601 C9orf57Q5W0N0 161 aa19.46■□□□□ 0.71
TPM3-220ENST00000509601 PARM1Q6UWI2 310 aa19.46■□□□□ 0.71
TPM3-220ENST00000509601 BEST2Q8NFU1 509 aa19.46■□□□□ 0.71
TPM3-220ENST00000509601 POMGNT1Q8WZA1 660 aa19.46■□□□□ 0.71
TPM3-220ENST00000509601 FGF14Q92915 247 aa19.46■□□□□ 0.71
TPM3-220ENST00000509601 PRRX2Q99811 253 aa19.46■□□□□ 0.71
TPM3-220ENST00000509601 CYP4F11Q9HBI6 524 aa19.46■□□□□ 0.71
TPM3-220ENST00000509601 KBTBD4Q9NVX7 518 aa19.46■□□□□ 0.71
TPM3-220ENST00000509601 WNT16Q9UBV4 365 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms