RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 ALAS1P13196 640 aa3.19□□□□□ -1.9
XRCC4-204ENST00000509268 SFPQP23246 707 aaKnown RBP eCLIP3.19□□□□□ -1.9
XRCC4-204ENST00000509268 MANFP55145 182 aaKnown RBP3.19□□□□□ -1.9
XRCC4-204ENST00000509268 RPS7P62081 194 aaKnown RBP3.19□□□□□ -1.9
XRCC4-204ENST00000509268 TRIM25Q14258 630 aaKnown RBP3.19□□□□□ -1.9
XRCC4-204ENST00000509268 ZNF460Q14592 562 aa3.19□□□□□ -1.9
XRCC4-204ENST00000509268 FAM180AQ6UWF9 173 aa3.19□□□□□ -1.9
XRCC4-204ENST00000509268 FRMD7Q6ZUT3 714 aa3.19□□□□□ -1.9
XRCC4-204ENST00000509268 CLNKQ7Z7G1 428 aa3.19□□□□□ -1.9
XRCC4-204ENST00000509268 MRPL10Q7Z7H8 261 aaKnown RBP3.19□□□□□ -1.9
XRCC4-204ENST00000509268 SLC30A5Q8TAD4 765 aa3.19□□□□□ -1.9
XRCC4-204ENST00000509268 LPIN2Q92539 896 aa3.19□□□□□ -1.9
XRCC4-204ENST00000509268 LYZL4Q96KX0 146 aa3.19□□□□□ -1.9
XRCC4-204ENST00000509268 CLUHP3Q96NS8 147 aa3.19□□□□□ -1.9
XRCC4-204ENST00000509268 KLC4Q9NSK0 619 aa3.19□□□□□ -1.9
XRCC4-204ENST00000509268 PPP2R3BQ9Y5P8 575 aa3.19□□□□□ -1.9
XRCC4-204ENST00000509268 EME2A4GXA9 379 aaPredicted RBP3.18□□□□□ -1.9
XRCC4-204ENST00000509268 GSG1L2A8MUP6 293 aa3.18□□□□□ -1.9
XRCC4-204ENST00000509268 TGM5O43548 720 aa3.18□□□□□ -1.9
XRCC4-204ENST00000509268 JTBO76095 146 aa3.18□□□□□ -1.9
XRCC4-204ENST00000509268 URI1O94763 535 aaPredicted RBP3.18□□□□□ -1.9
XRCC4-204ENST00000509268 OAZ2O95190 189 aa3.18□□□□□ -1.9
XRCC4-204ENST00000509268 CHRM2P08172 466 aa3.18□□□□□ -1.9
XRCC4-204ENST00000509268 FPGSQ05932 587 aa3.18□□□□□ -1.9
XRCC4-204ENST00000509268 ZNF529Q6P280 563 aa3.18□□□□□ -1.9
XRCC4-204ENST00000509268 TSHZ1Q6ZSZ6 1077 aa3.18□□□□□ -1.9
XRCC4-204ENST00000509268 SEM1Q6ZVN7 128 aa3.18□□□□□ -1.9
XRCC4-204ENST00000509268 FBXO34Q9NWN3 711 aa3.18□□□□□ -1.9
XRCC4-204ENST00000509268 KRTAP9-6A8MVA2 160 aa3.17□□□□□ -1.9
XRCC4-204ENST00000509268 TEX33O43247 280 aa3.17□□□□□ -1.9
XRCC4-204ENST00000509268 AKR1B10O60218 316 aa3.17□□□□□ -1.9
XRCC4-204ENST00000509268 F2P00734 622 aa3.17□□□□□ -1.9
XRCC4-204ENST00000509268 DRD4P21917 467 aa3.17□□□□□ -1.9
XRCC4-204ENST00000509268 GATA3P23771 443 aa3.17□□□□□ -1.9
XRCC4-204ENST00000509268 THBS3P49746 956 aa3.17□□□□□ -1.9
XRCC4-204ENST00000509268 NOMO3P69849 1222 aa3.17□□□□□ -1.9
XRCC4-204ENST00000509268 NOMO1Q15155 1222 aa3.17□□□□□ -1.9
XRCC4-204ENST00000509268 ZNF628Q5EBL2 1059 aa3.17□□□□□ -1.9
XRCC4-204ENST00000509268 NOMO2Q5JPE7 1267 aa3.17□□□□□ -1.9
XRCC4-204ENST00000509268 CEP85Q6P2H3 762 aa3.17□□□□□ -1.9
XRCC4-204ENST00000509268 RBMXL3Q8N7X1 1067 aaKnown RBP3.17□□□□□ -1.9
XRCC4-204ENST00000509268 GPR156Q8NFN8 814 aa3.17□□□□□ -1.9
XRCC4-204ENST00000509268 PIGOQ8TEQ8 1089 aa3.17□□□□□ -1.9
XRCC4-204ENST00000509268 SH2D3AQ9BRG2 576 aa3.17□□□□□ -1.9
XRCC4-204ENST00000509268 AFG3L2Q9Y4W6 797 aa3.17□□□□□ -1.9
XRCC4-204ENST00000509268 KCNU1A8MYU2 1149 aa3.17□□□□□ -1.9
XRCC4-204ENST00000509268 ADSLP30566 484 aaPredicted RBP3.17□□□□□ -1.9
XRCC4-204ENST00000509268 CCT8P50990 548 aa3.17□□□□□ -1.9
XRCC4-204ENST00000509268 ITIH3Q06033 890 aa3.17□□□□□ -1.9
XRCC4-204ENST00000509268 ERV3-1Q14264 604 aa3.17□□□□□ -1.9
XRCC4-204ENST00000509268 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.17□□□□□ -1.9
XRCC4-204ENST00000509268 GALNT16Q8N428 558 aa3.17□□□□□ -1.9
XRCC4-204ENST00000509268 ACRBPQ8NEB7 543 aa3.17□□□□□ -1.9
XRCC4-204ENST00000509268 MYCBPAPQ8TBZ2 947 aa3.17□□□□□ -1.9
XRCC4-204ENST00000509268 TMEM125Q96AQ2 219 aa3.17□□□□□ -1.9
XRCC4-204ENST00000509268 VCPIP1Q96JH7 1222 aa3.17□□□□□ -1.9
XRCC4-204ENST00000509268 PBKQ96KB5 322 aa3.17□□□□□ -1.9
XRCC4-204ENST00000509268 DEPDC7Q96QD5 511 aa3.17□□□□□ -1.9
XRCC4-204ENST00000509268 DNAJC7Q99615 494 aa3.17□□□□□ -1.9
XRCC4-204ENST00000509268 NOTCH4Q99466 2003 aa3.16□□□□□ -1.9
XRCC4-204ENST00000509268 SMIM35A0A1B0GVV1 85 aa3.16□□□□□ -1.9
XRCC4-204ENST00000509268 FAM83GA6ND36 823 aa3.16□□□□□ -1.9
XRCC4-204ENST00000509268 TISP43B9A030 160 aa3.16□□□□□ -1.9
XRCC4-204ENST00000509268 PRRT4C9JH25 899 aa3.16□□□□□ -1.9
XRCC4-204ENST00000509268 WNT10BO00744 389 aa3.16□□□□□ -1.9
XRCC4-204ENST00000509268 TCF3P15923 654 aa3.16□□□□□ -1.9
XRCC4-204ENST00000509268 KCNA2P16389 499 aa3.16□□□□□ -1.9
XRCC4-204ENST00000509268 SCP2P22307 547 aa3.16□□□□□ -1.9
XRCC4-204ENST00000509268 ECHS1P30084 290 aa3.16□□□□□ -1.9
XRCC4-204ENST00000509268 KPNA1P52294 538 aaPredicted RBP3.16□□□□□ -1.9
XRCC4-204ENST00000509268 DSG1Q02413 1049 aa3.16□□□□□ -1.9
XRCC4-204ENST00000509268 DAZAP2Q15038 168 aaPredicted RBP3.16□□□□□ -1.9
XRCC4-204ENST00000509268 C2orf27AQ580R0 203 aa3.16□□□□□ -1.9
XRCC4-204ENST00000509268 PLAC9Q5JTB6 97 aa3.16□□□□□ -1.9
XRCC4-204ENST00000509268 IRF2BP2Q7Z5L9 587 aa3.16□□□□□ -1.9
XRCC4-204ENST00000509268 CHTF18Q8WVB6 975 aa3.16□□□□□ -1.9
XRCC4-204ENST00000509268 RIN2Q8WYP3 895 aaPredicted RBP3.16□□□□□ -1.9
XRCC4-204ENST00000509268 ORAI2Q96SN7 254 aa3.16□□□□□ -1.9
XRCC4-204ENST00000509268 UHRF1Q96T88 793 aaPredicted RBP3.16□□□□□ -1.9
XRCC4-204ENST00000509268 TXLNGQ9NUQ3 528 aa3.16□□□□□ -1.9
XRCC4-204ENST00000509268 FAM90A8PA6NJQ4 464 aa3.15□□□□□ -1.91
XRCC4-204ENST00000509268 TMEM191BP0C7N4 346 aa3.15□□□□□ -1.91
XRCC4-204ENST00000509268 FAM90A13PP0C7W8 464 aa3.15□□□□□ -1.91
XRCC4-204ENST00000509268 FAM90A24PP0C7X0 464 aa3.15□□□□□ -1.91
XRCC4-204ENST00000509268 GUCY1A2P33402 732 aa3.15□□□□□ -1.91
XRCC4-204ENST00000509268 LGALS4P56470 323 aa3.15□□□□□ -1.91
XRCC4-204ENST00000509268 OCRLQ01968 901 aa3.15□□□□□ -1.91
XRCC4-204ENST00000509268 SLFN5Q08AF3 891 aa3.15□□□□□ -1.91
XRCC4-204ENST00000509268 DYRK1AQ13627 763 aa3.15□□□□□ -1.91
XRCC4-204ENST00000509268 SEMA3AQ14563 771 aa3.15□□□□□ -1.91
XRCC4-204ENST00000509268 LRRC41Q15345 812 aa3.15□□□□□ -1.91
XRCC4-204ENST00000509268 TERF2Q15554 542 aa3.15□□□□□ -1.91
XRCC4-204ENST00000509268 PRAMEF17Q5VTA0 474 aa3.15□□□□□ -1.91
XRCC4-204ENST00000509268 Q6ZVL8 140 aa3.15□□□□□ -1.91
XRCC4-204ENST00000509268 PQLC1Q8N2U9 271 aa3.15□□□□□ -1.91
XRCC4-204ENST00000509268 SYNPOQ8N3V7 929 aa3.15□□□□□ -1.91
XRCC4-204ENST00000509268 LILRB2Q8N423 598 aa3.15□□□□□ -1.91
XRCC4-204ENST00000509268 CAMKK1Q8N5S9 505 aa3.15□□□□□ -1.91
XRCC4-204ENST00000509268 PRSS3P2Q8NHM4 247 aa3.15□□□□□ -1.91
XRCC4-204ENST00000509268 WBP1Q96G27 269 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms