RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 ATG9AQ7Z3C6 839 aa4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 FILIP1Q7Z7B0 1213 aa4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 FAM124AQ86V42 546 aa4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 C11orf74Q86VG3 221 aa4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 RASAL3Q86YV0 1011 aa4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 APOBEC3FQ8IUX4 373 aaKnown RBP4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 CALML6Q8TD86 181 aa4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 PRMT6Q96LA8 375 aaPredicted RBP4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 FAM126AQ9BYI3 521 aaPredicted RBP4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 DEFB129Q9H1M3 183 aa4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 POFUT1Q9H488 388 aa4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 ZMAT4Q9H898 229 aa4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 BARX1Q9HBU1 254 aaPredicted RBP4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 EMC7Q9NPA0 242 aa4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 RNF186Q9NXI6 227 aa4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 PTPN22Q9Y2R2 807 aa4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 DUSP10Q9Y6W6 482 aa4.29□□□□□ -1.72
UBE2D3-226ENST00000508635 KIF16BQ96L93 1317 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 PAPPA2Q9BXP8 1791 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 CLRN2A0PK11 232 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 C9orf118A6NHY6 69 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 B4GALT4O60513 344 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 BCAR3O75815 825 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 CIAO1O76071 339 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 CHGBP05060 677 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 UBTFL1P0CB47 393 aaPredicted RBP4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 ZNF888P0CJ79 500 aaPredicted RBP4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 APEX1P27695 318 aaKnown RBP4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 CNR2P34972 360 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 NF2P35240 595 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 RBM5P52756 815 aaKnown RBP eCLIP4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 SMAD3P84022 425 aaKnown RBP4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 OCRLQ01968 901 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 ROM1Q03395 351 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 MOGSQ13724 837 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 PRKG1Q13976 671 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 NOLC1Q14978 699 aaKnown RBP eCLIP4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 EPHA7Q15375 998 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 DHCR24Q15392 516 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 PUM3Q15397 648 aaKnown RBP4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 KANK2Q63ZY3 851 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 Q6ZUG5 572 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 ARMC9Q7Z3E5 817 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 KBTBD2Q8IY47 623 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 KLHL36Q8N4N3 616 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 C7orf31Q8N865 590 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 LPIN2Q92539 896 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 E2F7Q96AV8 911 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 MBD6Q96DN6 1003 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 ABHD8Q96I13 439 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 MAML3Q96JK9 1138 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 TTC1Q99614 292 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 MEIS3Q99687 375 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 FOXB1Q99853 325 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 MYL10Q9BUA6 226 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 MRIQ9BWK5 157 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 SEMA4AQ9H3S1 761 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 IFT22Q9H7X7 185 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 SPC25Q9HBM1 224 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 SAGE1Q9NXZ1 904 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 ZNF70Q9UC06 446 aaPredicted RBP4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 FZD1Q9UP38 647 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 HDAC5Q9UQL6 1122 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 PRKAB1Q9Y478 270 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 PPP2R3BQ9Y5P8 575 aa4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 LRRFIP2Q9Y608 721 aaKnown RBP4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 COL1A1P02452 1464 aaPredicted RBP4.28□□□□□ -1.72
UBE2D3-226ENST00000508635 SSC5DA1L4H1 1573 aa4.27□□□□□ -1.73
UBE2D3-226ENST00000508635 PRICKLE3O43900 615 aaPredicted RBP4.27□□□□□ -1.73
UBE2D3-226ENST00000508635 B4GALT3O60512 393 aa4.27□□□□□ -1.73
UBE2D3-226ENST00000508635 DNAJC6O75061 913 aa4.27□□□□□ -1.73
UBE2D3-226ENST00000508635 FRAT2O75474 233 aaPredicted RBP4.27□□□□□ -1.73
UBE2D3-226ENST00000508635 HMGCRP04035 888 aa4.27□□□□□ -1.73
UBE2D3-226ENST00000508635 IFIT1P09914 478 aaKnown RBP4.27□□□□□ -1.73
UBE2D3-226ENST00000508635 SLC5A1P13866 664 aa4.27□□□□□ -1.73
UBE2D3-226ENST00000508635 TRIM27P14373 513 aa4.27□□□□□ -1.73
UBE2D3-226ENST00000508635 BPIP17213 487 aa4.27□□□□□ -1.73
UBE2D3-226ENST00000508635 CD40P25942 277 aa4.27□□□□□ -1.73
UBE2D3-226ENST00000508635 CSF2RBP32927 897 aa4.27□□□□□ -1.73
UBE2D3-226ENST00000508635 IL15P40933 162 aaPredicted RBP4.27□□□□□ -1.73
UBE2D3-226ENST00000508635 TM4SF4P48230 202 aa4.27□□□□□ -1.73
UBE2D3-226ENST00000508635 STAT5BP51692 787 aa4.27□□□□□ -1.73
UBE2D3-226ENST00000508635 ADCY1Q08828 1119 aa4.27□□□□□ -1.73
UBE2D3-226ENST00000508635 CHAF1AQ13111 956 aaPredicted RBP4.27□□□□□ -1.73
UBE2D3-226ENST00000508635 TOP3AQ13472 1001 aaPredicted RBP4.27□□□□□ -1.73
UBE2D3-226ENST00000508635 MTX1Q13505 466 aa4.27□□□□□ -1.73
UBE2D3-226ENST00000508635 STILQ15468 1287 aa4.27□□□□□ -1.73
UBE2D3-226ENST00000508635 SUPT20HL1Q3ZLR7 823 aa4.27□□□□□ -1.73
UBE2D3-226ENST00000508635 UBXN11Q5T124 520 aa4.27□□□□□ -1.73
UBE2D3-226ENST00000508635 RNF187Q5TA31 235 aaPredicted RBP4.27□□□□□ -1.73
UBE2D3-226ENST00000508635 BROXQ5VW32 411 aa4.27□□□□□ -1.73
UBE2D3-226ENST00000508635 GRAMD4Q6IC98 578 aa4.27□□□□□ -1.73
UBE2D3-226ENST00000508635 BORAQ6PGQ7 559 aa4.27□□□□□ -1.73
UBE2D3-226ENST00000508635 UNQ6494/PRO21346Q6UXR6 183 aa4.27□□□□□ -1.73
UBE2D3-226ENST00000508635 ATF7IPQ6VMQ6 1270 aa4.27□□□□□ -1.73
UBE2D3-226ENST00000508635 LHFPL2Q6ZUX7 228 aa4.27□□□□□ -1.73
UBE2D3-226ENST00000508635 ZZZ3Q8IYH5 903 aa4.27□□□□□ -1.73
UBE2D3-226ENST00000508635 AFAP1L2Q8N4X5 818 aa4.27□□□□□ -1.73
UBE2D3-226ENST00000508635 TBC1D22AQ8WUA7 517 aa4.27□□□□□ -1.73
UBE2D3-226ENST00000508635 TEPSINQ96N21 525 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms