RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 GPATCH3Q96I76 525 aa7.01□□□□□ -1.29
TOPBP1-206ENST00000508524 TYRP1P17643 537 aa7□□□□□ -1.29
TOPBP1-206ENST00000508524 PTPROQ16827 1216 aa7□□□□□ -1.29
TOPBP1-206ENST00000508524 UAP1L1Q3KQV9 507 aa7□□□□□ -1.29
TOPBP1-206ENST00000508524 FLYWCH1Q4VC44 716 aa7□□□□□ -1.29
TOPBP1-206ENST00000508524 ZCRB1Q8TBF4 217 aaKnown RBP7□□□□□ -1.29
TOPBP1-206ENST00000508524 NSUN6Q8TEA1 469 aaKnown RBP7□□□□□ -1.29
TOPBP1-206ENST00000508524 ZG16BQ96DA0 208 aa7□□□□□ -1.29
TOPBP1-206ENST00000508524 CLPTM1LQ96KA5 538 aa7□□□□□ -1.29
TOPBP1-206ENST00000508524 PNKPQ96T60 521 aa7□□□□□ -1.29
TOPBP1-206ENST00000508524 GALNT9Q9HCQ5 603 aa7□□□□□ -1.29
TOPBP1-206ENST00000508524 CD1AP06126 327 aa6.99□□□□□ -1.29
TOPBP1-206ENST00000508524 MTHFD1P11586 935 aaKnown RBP6.99□□□□□ -1.29
TOPBP1-206ENST00000508524 NANOS3P60323 173 aaKnown RBP6.99□□□□□ -1.29
TOPBP1-206ENST00000508524 BRDTQ58F21 947 aaPredicted RBP6.99□□□□□ -1.29
TOPBP1-206ENST00000508524 FOXR2Q6PJQ5 311 aa6.99□□□□□ -1.29
TOPBP1-206ENST00000508524 OLFML1Q6UWY5 402 aa6.99□□□□□ -1.29
TOPBP1-206ENST00000508524 Q8NA96 180 aa6.99□□□□□ -1.29
TOPBP1-206ENST00000508524 IL17RDQ8NFM7 739 aa6.99□□□□□ -1.29
TOPBP1-206ENST00000508524 TLR10Q9BXR5 811 aa6.99□□□□□ -1.29
TOPBP1-206ENST00000508524 BRINP2Q9C0B6 783 aa6.99□□□□□ -1.29
TOPBP1-206ENST00000508524 SYNPO2LQ9H987 977 aa6.99□□□□□ -1.29
TOPBP1-206ENST00000508524 HOMER2Q9NSB8 354 aa6.99□□□□□ -1.29
TOPBP1-206ENST00000508524 CALCOCO1Q9P1Z2 691 aa6.99□□□□□ -1.29
TOPBP1-206ENST00000508524 SPEF1Q9Y4P9 236 aa6.99□□□□□ -1.29
TOPBP1-206ENST00000508524 CFAP20Q9Y6A4 193 aaKnown RBP6.99□□□□□ -1.29
TOPBP1-206ENST00000508524 MAST3O60307 1309 aa6.99□□□□□ -1.29
TOPBP1-206ENST00000508524 AGFG2O95081 481 aa6.98□□□□□ -1.29
TOPBP1-206ENST00000508524 BMP5P22003 454 aa6.98□□□□□ -1.29
TOPBP1-206ENST00000508524 FDXRP22570 491 aa6.98□□□□□ -1.29
TOPBP1-206ENST00000508524 DSC2Q02487 901 aa6.98□□□□□ -1.29
TOPBP1-206ENST00000508524 PPP4R3AQ6IN85 833 aa6.98□□□□□ -1.29
TOPBP1-206ENST00000508524 SLC44A3Q8N4M1 653 aa6.98□□□□□ -1.29
TOPBP1-206ENST00000508524 CAVIN3Q969G5 261 aa6.98□□□□□ -1.29
TOPBP1-206ENST00000508524 Q96MF0 132 aa6.98□□□□□ -1.29
TOPBP1-206ENST00000508524 MED15Q96RN5 788 aa6.98□□□□□ -1.29
TOPBP1-206ENST00000508524 UNKLQ9H9P5 680 aaKnown RBP6.98□□□□□ -1.29
TOPBP1-206ENST00000508524 VSX1Q9NZR4 365 aaPredicted RBP6.98□□□□□ -1.29
TOPBP1-206ENST00000508524 JKAMPQ9P055 326 aa6.98□□□□□ -1.29
TOPBP1-206ENST00000508524 MTO1Q9Y2Z2 717 aaKnown RBP6.98□□□□□ -1.29
TOPBP1-206ENST00000508524 MYADML2A6NDP7 307 aa6.97□□□□□ -1.29
TOPBP1-206ENST00000508524 SLC43A1O75387 559 aa6.97□□□□□ -1.29
TOPBP1-206ENST00000508524 ESRRBO95718 433 aa6.97□□□□□ -1.29
TOPBP1-206ENST00000508524 MPLP40238 635 aa6.97□□□□□ -1.29
TOPBP1-206ENST00000508524 VAV2P52735 878 aa6.97□□□□□ -1.29
TOPBP1-206ENST00000508524 GEN1Q17RS7 908 aa6.97□□□□□ -1.29
TOPBP1-206ENST00000508524 UTP14CQ5TAP6 766 aaKnown RBP6.97□□□□□ -1.29
TOPBP1-206ENST00000508524 GADL1Q6ZQY3 521 aa6.97□□□□□ -1.29
TOPBP1-206ENST00000508524 TESQ9UGI8 421 aaKnown RBP6.97□□□□□ -1.29
TOPBP1-206ENST00000508524 SLC45A2Q9UMX9 530 aa6.97□□□□□ -1.29
TOPBP1-206ENST00000508524 ERN1O75460 977 aaKnown RBP6.96□□□□□ -1.3
TOPBP1-206ENST00000508524 CCND1P24385 295 aa6.96□□□□□ -1.3
TOPBP1-206ENST00000508524 RECQLP46063 649 aaPredicted RBP6.96□□□□□ -1.3
TOPBP1-206ENST00000508524 MPP3Q13368 585 aa6.96□□□□□ -1.3
TOPBP1-206ENST00000508524 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.96□□□□□ -1.3
TOPBP1-206ENST00000508524 ZNF365Q70YC5 407 aa6.96□□□□□ -1.3
TOPBP1-206ENST00000508524 DNAJC10Q8IXB1 793 aa6.96□□□□□ -1.3
TOPBP1-206ENST00000508524 KLHL32Q96NJ5 620 aa6.96□□□□□ -1.3
TOPBP1-206ENST00000508524 PACSIN1Q9BY11 444 aa6.96□□□□□ -1.3
TOPBP1-206ENST00000508524 ALG13Q9NP73 1137 aaKnown RBP6.96□□□□□ -1.3
TOPBP1-206ENST00000508524 TBCCD1Q9NVR7 557 aa6.96□□□□□ -1.3
TOPBP1-206ENST00000508524 NT5C1B-RDH14C9J2C7 533 aa6.95□□□□□ -1.3
TOPBP1-206ENST00000508524 CLK3P49761 638 aaKnown RBP6.95□□□□□ -1.3
TOPBP1-206ENST00000508524 TMEM240Q5SV17 173 aa6.95□□□□□ -1.3
TOPBP1-206ENST00000508524 TTC7BQ86TV6 843 aa6.95□□□□□ -1.3
TOPBP1-206ENST00000508524 MIER2Q8N344 545 aa6.95□□□□□ -1.3
TOPBP1-206ENST00000508524 VRK1Q99986 396 aaPredicted RBP6.95□□□□□ -1.3
TOPBP1-206ENST00000508524 CDYLQ9Y232 598 aa6.95□□□□□ -1.3
TOPBP1-206ENST00000508524 SALL3Q9BXA9 1300 aa6.95□□□□□ -1.3
TOPBP1-206ENST00000508524 ANKRD62A6NC57 917 aa6.94□□□□□ -1.3
TOPBP1-206ENST00000508524 RPLP2P05387 115 aaKnown RBP6.94□□□□□ -1.3
TOPBP1-206ENST00000508524 MALP21145 153 aa6.94□□□□□ -1.3
TOPBP1-206ENST00000508524 PLA2G5P39877 138 aa6.94□□□□□ -1.3
TOPBP1-206ENST00000508524 FXR1P51114 621 aaKnown RBP eCLIP6.94□□□□□ -1.3
TOPBP1-206ENST00000508524 SNAPC2Q13487 334 aa6.94□□□□□ -1.3
TOPBP1-206ENST00000508524 KHDC1Q4VXA5 237 aaKnown RBP6.94□□□□□ -1.3
TOPBP1-206ENST00000508524 Q6ZNX1 250 aa6.94□□□□□ -1.3
TOPBP1-206ENST00000508524 COLGALT2Q8IYK4 626 aa6.94□□□□□ -1.3
TOPBP1-206ENST00000508524 TMIEQ8NEW7 156 aa6.94□□□□□ -1.3
TOPBP1-206ENST00000508524 PRDM13Q9H4Q3 707 aa6.94□□□□□ -1.3
TOPBP1-206ENST00000508524 ZNHIT2Q9UHR6 403 aa6.94□□□□□ -1.3
TOPBP1-206ENST00000508524 NOP58Q9Y2X3 529 aaKnown RBP6.94□□□□□ -1.3
TOPBP1-206ENST00000508524 A0A1W2PS29 197 aa6.93□□□□□ -1.3
TOPBP1-206ENST00000508524 LRRC14BA6NHZ5 514 aa6.93□□□□□ -1.3
TOPBP1-206ENST00000508524 ZAR1LA6NP61 321 aa6.93□□□□□ -1.3
TOPBP1-206ENST00000508524 F2RL2O00254 374 aa6.93□□□□□ -1.3
TOPBP1-206ENST00000508524 KIAA0355O15063 1070 aa6.93□□□□□ -1.3
TOPBP1-206ENST00000508524 SNUPNO95149 360 aaKnown RBP6.93□□□□□ -1.3
TOPBP1-206ENST00000508524 NUDT3O95989 172 aa6.93□□□□□ -1.3
TOPBP1-206ENST00000508524 PRR16Q569H4 304 aa6.93□□□□□ -1.3
TOPBP1-206ENST00000508524 LNX2Q8N448 690 aa6.93□□□□□ -1.3
TOPBP1-206ENST00000508524 CHMP4CQ96CF2 233 aa6.93□□□□□ -1.3
TOPBP1-206ENST00000508524 PTCD3Q96EY7 689 aaKnown RBP6.93□□□□□ -1.3
TOPBP1-206ENST00000508524 CRAMP1Q96RY5 1269 aa6.93□□□□□ -1.3
TOPBP1-206ENST00000508524 CASS4Q9NQ75 786 aa6.93□□□□□ -1.3
TOPBP1-206ENST00000508524 CTTNBP2NLQ9P2B4 639 aa6.93□□□□□ -1.3
TOPBP1-206ENST00000508524 KCNA2P16389 499 aa6.92□□□□□ -1.3
TOPBP1-206ENST00000508524 SP5Q6BEB4 398 aaPredicted RBP6.92□□□□□ -1.3
TOPBP1-206ENST00000508524 SLC4A10Q6U841 1118 aa6.92□□□□□ -1.3
TOPBP1-206ENST00000508524 PRIMA1Q86XR5 153 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms