RNA–Protein interactions for RNA: ENST00000508197.1

CAST-221, Transcript of calpastatin, humanhuman

TSL 3

Gene CAST, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-221ENST00000508197 SLC26A6Q9BXS9 759 aa12.38□□□□□ -0.43
CAST-221ENST00000508197 RNF26Q9BY78 433 aaPredicted RBP12.38□□□□□ -0.43
CAST-221ENST00000508197 FAM126AQ9BYI3 521 aaPredicted RBP12.38□□□□□ -0.43
CAST-221ENST00000508197 CHRDQ9H2X0 955 aa12.38□□□□□ -0.43
CAST-221ENST00000508197 GDPD2Q9HCC8 539 aa12.38□□□□□ -0.43
CAST-221ENST00000508197 CYLDQ9NQC7 956 aa12.38□□□□□ -0.43
CAST-221ENST00000508197 SEMA4GQ9NTN9 838 aa12.38□□□□□ -0.43
CAST-221ENST00000508197 A0A1B0GUA9 196 aa12.37□□□□□ -0.43
CAST-221ENST00000508197 CASTOR2A6NHX0 329 aa12.37□□□□□ -0.43
CAST-221ENST00000508197 INO80B-WBP1J3KQ70 363 aa12.37□□□□□ -0.43
CAST-221ENST00000508197 PTGESO14684 152 aa12.37□□□□□ -0.43
CAST-221ENST00000508197 KIF4AO95239 1232 aa12.37□□□□□ -0.43
CAST-221ENST00000508197 P4HBP07237 508 aaKnown RBP12.37□□□□□ -0.43
CAST-221ENST00000508197 RETP07949 1114 aa12.37□□□□□ -0.43
CAST-221ENST00000508197 POU2F2P09086 479 aa12.37□□□□□ -0.43
CAST-221ENST00000508197 IFNAR1P17181 557 aa12.37□□□□□ -0.43
CAST-221ENST00000508197 FCARP24071 287 aa12.37□□□□□ -0.43
CAST-221ENST00000508197 YWHABP31946 246 aaKnown RBP12.37□□□□□ -0.43
CAST-221ENST00000508197 OR1D2P34982 312 aa12.37□□□□□ -0.43
CAST-221ENST00000508197 CREMQ03060 361 aa12.37□□□□□ -0.43
CAST-221ENST00000508197 GRIK3Q13003 919 aa12.37□□□□□ -0.43
CAST-221ENST00000508197 SRSF5Q13243 272 aaKnown RBP12.37□□□□□ -0.43
CAST-221ENST00000508197 PSMD5Q16401 504 aa12.37□□□□□ -0.43
CAST-221ENST00000508197 UVSSAQ2YD98 709 aa12.37□□□□□ -0.43
CAST-221ENST00000508197 PABPC1LQ4VXU2 614 aaKnown RBP12.37□□□□□ -0.43
CAST-221ENST00000508197 LIN9Q5TKA1 542 aa12.37□□□□□ -0.43
CAST-221ENST00000508197 LAIR1Q6GTX8 287 aa12.37□□□□□ -0.43
CAST-221ENST00000508197 MOXD1Q6UVY6 613 aa12.37□□□□□ -0.43
CAST-221ENST00000508197 CELF5Q8N6W0 485 aaKnown RBP12.37□□□□□ -0.43
CAST-221ENST00000508197 CCDC148Q8NFR7 591 aa12.37□□□□□ -0.43
CAST-221ENST00000508197 HAS1Q92839 578 aa12.37□□□□□ -0.43
CAST-221ENST00000508197 CCDC51Q96ER9 411 aa12.37□□□□□ -0.43
CAST-221ENST00000508197 NCOA5Q9HCD5 579 aaKnown RBP12.37□□□□□ -0.43
CAST-221ENST00000508197 KCNMB3Q9NPA1 279 aa12.37□□□□□ -0.43
CAST-221ENST00000508197 PARP2Q9UGN5 583 aa12.37□□□□□ -0.43
CAST-221ENST00000508197 DDX25Q9UHL0 483 aaKnown RBP12.37□□□□□ -0.43
CAST-221ENST00000508197 DNMT3LQ9UJW3 386 aa12.37□□□□□ -0.43
CAST-221ENST00000508197 KCNH3Q9ULD8 1083 aa12.37□□□□□ -0.43
CAST-221ENST00000508197 NDRG2Q9UN36 371 aaKnown RBP12.37□□□□□ -0.43
CAST-221ENST00000508197 PCDHA4Q9UN74 947 aa12.37□□□□□ -0.43
CAST-221ENST00000508197 NID2Q14112 1375 aa12.37□□□□□ -0.43
CAST-221ENST00000508197 CNOT1A5YKK6 2376 aaKnown RBP12.37□□□□□ -0.43
CAST-221ENST00000508197 SF3B1O75533 1304 aaKnown RBP eCLIP12.37□□□□□ -0.437e-6■■■■■ 52.4
CAST-221ENST00000508197 TM4SF5O14894 197 aa12.36□□□□□ -0.43
CAST-221ENST00000508197 XYLBO75191 536 aa12.36□□□□□ -0.43
CAST-221ENST00000508197 NPTXRO95502 500 aa12.36□□□□□ -0.43
CAST-221ENST00000508197 ARL2P36404 184 aa12.36□□□□□ -0.43
CAST-221ENST00000508197 CCT2P78371 535 aaKnown RBP12.36□□□□□ -0.43
CAST-221ENST00000508197 POU5F1BQ06416 359 aa12.36□□□□□ -0.43
CAST-221ENST00000508197 TUSC3Q13454 348 aa12.36□□□□□ -0.43
CAST-221ENST00000508197 CAPSQ13938 189 aa12.36□□□□□ -0.43
CAST-221ENST00000508197 CTTNQ14247 550 aaKnown RBP12.36□□□□□ -0.43
CAST-221ENST00000508197 GRM2Q14416 872 aa12.36□□□□□ -0.43
CAST-221ENST00000508197 PCBP1Q15365 356 aaKnown RBP eCLIP12.36□□□□□ -0.43
CAST-221ENST00000508197 EPHA7Q15375 998 aa12.36□□□□□ -0.43
CAST-221ENST00000508197 INF2Q27J81 1249 aa12.36□□□□□ -0.43
CAST-221ENST00000508197 XKR9Q5GH70 373 aa12.36□□□□□ -0.43
CAST-221ENST00000508197 N4BP2L1Q5TBK1 243 aaPredicted RBP12.36□□□□□ -0.43
CAST-221ENST00000508197 CD300LGQ6UXG3 332 aa12.36□□□□□ -0.43
CAST-221ENST00000508197 PRR23CQ6ZRP0 262 aa12.36□□□□□ -0.43
CAST-221ENST00000508197 TCP11Q8WWU5 503 aa12.36□□□□□ -0.43
CAST-221ENST00000508197 AIFM3Q96NN9 605 aa12.36□□□□□ -0.43
CAST-221ENST00000508197 LXNQ9BS40 222 aa12.36□□□□□ -0.43
CAST-221ENST00000508197 LMAN1LQ9HAT1 526 aa12.36□□□□□ -0.43
CAST-221ENST00000508197 SH3GLB2Q9NR46 395 aa12.36□□□□□ -0.43
CAST-221ENST00000508197 MRPS23Q9Y3D9 190 aaKnown RBP12.36□□□□□ -0.43
CAST-221ENST00000508197 PPME1Q9Y570 386 aa12.36□□□□□ -0.43
CAST-221ENST00000508197 SLITRK3O94933 977 aa12.35□□□□□ -0.43
CAST-221ENST00000508197 RHOP08100 348 aa12.35□□□□□ -0.43
CAST-221ENST00000508197 CHRNB1P11230 501 aa12.35□□□□□ -0.43
CAST-221ENST00000508197 CEBPBP17676 345 aa12.35□□□□□ -0.43
CAST-221ENST00000508197 GLRA2P23416 452 aa12.35□□□□□ -0.43
CAST-221ENST00000508197 PMLP29590 882 aa12.35□□□□□ -0.43
CAST-221ENST00000508197 PDIA3P30101 505 aaKnown RBP12.35□□□□□ -0.43
CAST-221ENST00000508197 ABL2P42684 1182 aa12.35□□□□□ -0.43
CAST-221ENST00000508197 SATB1Q01826 763 aa12.35□□□□□ -0.43
CAST-221ENST00000508197 AKAP17AQ02040 695 aaKnown RBP12.35□□□□□ -0.43
CAST-221ENST00000508197 SPIRE1Q08AE8 756 aa12.35□□□□□ -0.43
CAST-221ENST00000508197 MXD4Q14582 209 aaPredicted RBP12.35□□□□□ -0.43
CAST-221ENST00000508197 CSRP2Q16527 193 aa12.35□□□□□ -0.43
CAST-221ENST00000508197 WDR44Q5JSH3 913 aa12.35□□□□□ -0.43
CAST-221ENST00000508197 FAM78AQ5JUQ0 283 aa12.35□□□□□ -0.43
CAST-221ENST00000508197 PRR23BQ6ZRT6 265 aa12.35□□□□□ -0.43
CAST-221ENST00000508197 SKAP1Q86WV1 359 aa12.35□□□□□ -0.43
CAST-221ENST00000508197 MAP4K3Q8IVH8 894 aa12.35□□□□□ -0.43
CAST-221ENST00000508197 EXOC8Q8IYI6 725 aa12.35□□□□□ -0.43
CAST-221ENST00000508197 BLIDQ8IZY5 108 aa12.35□□□□□ -0.43
CAST-221ENST00000508197 KCNB2Q92953 911 aa12.35□□□□□ -0.43
CAST-221ENST00000508197 ELSPBP1Q96BH3 223 aa12.35□□□□□ -0.43
CAST-221ENST00000508197 TCEAL4Q96EI5 215 aa12.35□□□□□ -0.43
CAST-221ENST00000508197 DYDC2Q96IM9 177 aa12.35□□□□□ -0.43
CAST-221ENST00000508197 AGXT2Q9BYV1 514 aa12.35□□□□□ -0.43
CAST-221ENST00000508197 TRIM6Q9C030 488 aaPredicted RBP12.35□□□□□ -0.43
CAST-221ENST00000508197 SLKQ9H2G2 1235 aaPredicted RBP12.35□□□□□ -0.43
CAST-221ENST00000508197 C2orf42Q9NWW7 574 aa12.35□□□□□ -0.43
CAST-221ENST00000508197 GDE1Q9NZC3 331 aa12.35□□□□□ -0.43
CAST-221ENST00000508197 MRPS17Q9Y2R5 130 aaKnown RBP12.35□□□□□ -0.43
CAST-221ENST00000508197 A0A087WWV3 80 aa12.34□□□□□ -0.43
CAST-221ENST00000508197 CHURC1-FNTBB4DL54 471 aa12.34□□□□□ -0.43
CAST-221ENST00000508197 LRP3O75074 770 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms