RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 ACO2Q99798 780 aaKnown RBP8.77□□□□□ -1.01
SCN1A-207ENST00000507401 MRPL4Q9BYD3 311 aaKnown RBP8.77□□□□□ -1.01
SCN1A-207ENST00000507401 KCNH6Q9H252 994 aa8.77□□□□□ -1.01
SCN1A-207ENST00000507401 SFXN1Q9H9B4 322 aa8.77□□□□□ -1.01
SCN1A-207ENST00000507401 POLD4Q9HCU8 107 aa8.77□□□□□ -1.01
SCN1A-207ENST00000507401 KMT5AQ9NQR1 393 aa8.77□□□□□ -1.01
SCN1A-207ENST00000507401 FNIP2Q9P278 1114 aa8.77□□□□□ -1.01
SCN1A-207ENST00000507401 MUTYHQ9UIF7 546 aa8.77□□□□□ -1.01
SCN1A-207ENST00000507401 HCN4Q9Y3Q4 1203 aa8.77□□□□□ -1.01
SCN1A-207ENST00000507401 V9GYY5 206 aaPredicted RBP8.77□□□□□ -1.01
SCN1A-207ENST00000507401 TRIOO75962 3097 aa8.77□□□□□ -1.01
SCN1A-207ENST00000507401 PTGESO14684 152 aa8.76□□□□□ -1.01
SCN1A-207ENST00000507401 TEX28O15482 410 aa8.76□□□□□ -1.01
SCN1A-207ENST00000507401 ATP8B1O43520 1251 aa8.76□□□□□ -1.01
SCN1A-207ENST00000507401 RECQL4O94761 1208 aa8.76□□□□□ -1.01
SCN1A-207ENST00000507401 EDN1P05305 212 aa8.76□□□□□ -1.01
SCN1A-207ENST00000507401 SSBP05455 408 aaKnown RBP eCLIP8.76□□□□□ -1.01
SCN1A-207ENST00000507401 PLA2G4BP0C869 781 aa8.76□□□□□ -1.01
SCN1A-207ENST00000507401 MCF2P10911 925 aa8.76□□□□□ -1.01
SCN1A-207ENST00000507401 PLS3P13797 630 aa8.76□□□□□ -1.01
SCN1A-207ENST00000507401 PROZP22891 400 aa8.76□□□□□ -1.01
SCN1A-207ENST00000507401 GRM5P41594 1212 aa8.76□□□□□ -1.01
SCN1A-207ENST00000507401 SLC12A3P55017 1021 aa8.76□□□□□ -1.01
SCN1A-207ENST00000507401 UBE2HP62256 183 aa8.76□□□□□ -1.01
SCN1A-207ENST00000507401 ZXDAP98168 799 aa8.76□□□□□ -1.01
SCN1A-207ENST00000507401 ELAVL2Q12926 359 aaKnown RBP8.76□□□□□ -1.01
SCN1A-207ENST00000507401 MAPK7Q13164 816 aa8.76□□□□□ -1.01
SCN1A-207ENST00000507401 TERF2Q15554 542 aa8.76□□□□□ -1.01
SCN1A-207ENST00000507401 TMEM119Q4V9L6 283 aa8.76□□□□□ -1.01
SCN1A-207ENST00000507401 TEX35Q5T0J7 233 aa8.76□□□□□ -1.01
SCN1A-207ENST00000507401 EEF1DP3Q658K8 133 aa8.76□□□□□ -1.01
SCN1A-207ENST00000507401 FUT10Q6P4F1 479 aa8.76□□□□□ -1.01
SCN1A-207ENST00000507401 PDXDC1Q6P996 788 aa8.76□□□□□ -1.01
SCN1A-207ENST00000507401 LILRA6Q6PI73 481 aa8.76□□□□□ -1.01
SCN1A-207ENST00000507401 DCLRE1AQ6PJP8 1040 aa8.76□□□□□ -1.01
SCN1A-207ENST00000507401 ALKAL1Q6UXT8 129 aa8.76□□□□□ -1.01
SCN1A-207ENST00000507401 ZPBP2Q6X784 338 aa8.76□□□□□ -1.01
SCN1A-207ENST00000507401 KCNK18Q7Z418 384 aa8.76□□□□□ -1.01
SCN1A-207ENST00000507401 ZDHHC14Q8IZN3 488 aa8.76□□□□□ -1.01
SCN1A-207ENST00000507401 C12orf76Q8N812 135 aaPredicted RBP8.76□□□□□ -1.01
SCN1A-207ENST00000507401 CALML4Q96GE6 196 aa8.76□□□□□ -1.01
SCN1A-207ENST00000507401 UROC1Q96N76 676 aa8.76□□□□□ -1.01
SCN1A-207ENST00000507401 KIFC3Q9BVG8 833 aa8.76□□□□□ -1.01
SCN1A-207ENST00000507401 RUSC1Q9BVN2 902 aa8.76□□□□□ -1.01
SCN1A-207ENST00000507401 APOL5Q9BWW9 433 aa8.76□□□□□ -1.01
SCN1A-207ENST00000507401 GPR62Q9BZJ7 368 aa8.76□□□□□ -1.01
SCN1A-207ENST00000507401 PLEKHA4Q9H4M7 779 aa8.76□□□□□ -1.01
SCN1A-207ENST00000507401 TOPORSQ9NS56 1045 aaPredicted RBP8.76□□□□□ -1.01
SCN1A-207ENST00000507401 CWC15Q9P013 229 aaKnown RBP8.76□□□□□ -1.01
SCN1A-207ENST00000507401 LARSQ9P2J5 1176 aaKnown RBP8.76□□□□□ -1.01
SCN1A-207ENST00000507401 SF3B1O75533 1304 aaKnown RBP eCLIP8.76□□□□□ -1.01
SCN1A-207ENST00000507401 SMIM28A0A1B0GU29 152 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 FAM86C2PA6NEL3 165 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 TMEM189-UBE2V1I3L0A0 370 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 C2CD2LO14523 706 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 TRAPPC3O43617 180 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 TOM1L1O75674 476 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 ADCY5O95622 1261 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 GLUD1P00367 558 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 LIG1P18858 919 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 ABCD1P33897 745 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 YARSP54577 528 aaKnown RBP8.75□□□□□ -1.01
SCN1A-207ENST00000507401 SIGLEC14Q08ET2 396 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 STRN3Q13033 797 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 GPS2Q13227 327 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 SF3A1Q15459 793 aaKnown RBP8.75□□□□□ -1.01
SCN1A-207ENST00000507401 ZRSR1Q15695 479 aaKnown RBP8.75□□□□□ -1.01
SCN1A-207ENST00000507401 PTPN21Q16825 1174 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 ARSHQ5FYA8 562 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 RARS2Q5T160 578 aaKnown RBP8.75□□□□□ -1.01
SCN1A-207ENST00000507401 AXDND1Q5T1B0 1012 aaPredicted RBP8.75□□□□□ -1.01
SCN1A-207ENST00000507401 TMC5Q6UXY8 1006 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 RTL10Q7L3V2 364 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 TAS1R3Q7RTX0 852 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 UBALD2Q8IYN6 164 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 TMEM161BQ8NDZ6 487 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 CCDC112Q8NEF3 446 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 BAP1Q92560 729 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 HPS1Q92902 700 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 ACSF2Q96CM8 615 aaPredicted RBP8.75□□□□□ -1.01
SCN1A-207ENST00000507401 ACAP3Q96P50 834 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 PPP1R10Q96QC0 940 aaKnown RBP8.75□□□□□ -1.01
SCN1A-207ENST00000507401 TCHPQ9BT92 498 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 TTPALQ9BTX7 342 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 TARS2Q9BW92 718 aaKnown RBP8.75□□□□□ -1.01
SCN1A-207ENST00000507401 CCSER1Q9C0I3 900 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 KDM4CQ9H3R0 1056 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 POMKQ9H5K3 350 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 KCND1Q9NSA2 647 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 SLC38A7Q9NVC3 462 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 ODF2LQ9ULJ1 636 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 USP20Q9Y2K6 914 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 GDAQ9Y2T3 454 aa8.75□□□□□ -1.01
SCN1A-207ENST00000507401 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.75□□□□□ -1.01
SCN1A-207ENST00000507401 MTCL1Q9Y4B5 1905 aaKnown RBP8.75□□□□□ -1.01
SCN1A-207ENST00000507401 SFI1A8K8P3 1242 aa8.74□□□□□ -1.01
SCN1A-207ENST00000507401 F8W810 466 aa8.74□□□□□ -1.01
SCN1A-207ENST00000507401 ABLIM1O14639 778 aa8.74□□□□□ -1.01
SCN1A-207ENST00000507401 SLC16A4O15374 487 aa8.74□□□□□ -1.01
SCN1A-207ENST00000507401 TPM1P09493 284 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms