RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 QARSP47897 775 aaKnown RBP12.62□□□□□ -0.39
UBE3D-206ENST00000505226 POLGP54098 1239 aaPredicted RBP12.62□□□□□ -0.39
UBE3D-206ENST00000505226 WNT7BP56706 349 aa12.62□□□□□ -0.39
UBE3D-206ENST00000505226 ATP11AP98196 1134 aa12.62□□□□□ -0.39
UBE3D-206ENST00000505226 STAT4Q14765 748 aa12.62□□□□□ -0.39
UBE3D-206ENST00000505226 SLC1A5Q15758 541 aa12.62□□□□□ -0.39
UBE3D-206ENST00000505226 CCNG2Q16589 344 aa12.62□□□□□ -0.39
UBE3D-206ENST00000505226 FAM102BQ5T8I3 360 aa12.62□□□□□ -0.39
UBE3D-206ENST00000505226 LMBRD2Q68DH5 695 aaPredicted RBP12.62□□□□□ -0.39
UBE3D-206ENST00000505226 CAPN12Q6ZSI9 719 aa12.62□□□□□ -0.39
UBE3D-206ENST00000505226 CDAN1Q8IWY9 1227 aa12.62□□□□□ -0.39
UBE3D-206ENST00000505226 C4orf33Q8N1A6 199 aa12.62□□□□□ -0.39
UBE3D-206ENST00000505226 GRK7Q8WTQ7 553 aa12.62□□□□□ -0.39
UBE3D-206ENST00000505226 LRMDAQ9H2I8 198 aa12.62□□□□□ -0.39
UBE3D-206ENST00000505226 BATF3Q9NR55 127 aa12.62□□□□□ -0.39
UBE3D-206ENST00000505226 MRPL11Q9Y3B7 192 aaKnown RBP12.62□□□□□ -0.39
UBE3D-206ENST00000505226 ACTL7BQ9Y614 415 aa12.62□□□□□ -0.39
UBE3D-206ENST00000505226 LOXHD1Q8IVV2 1947 aa12.62□□□□□ -0.39
UBE3D-206ENST00000505226 NPM3O75607 178 aaKnown RBP12.62□□□□□ -0.39
UBE3D-206ENST00000505226 PIAS1O75925 651 aa12.62□□□□□ -0.39
UBE3D-206ENST00000505226 KRT10P13645 584 aa12.62□□□□□ -0.39
UBE3D-206ENST00000505226 GJC1P36383 396 aa12.62□□□□□ -0.39
UBE3D-206ENST00000505226 YARSP54577 528 aaKnown RBP12.62□□□□□ -0.39
UBE3D-206ENST00000505226 LACTBP83111 547 aaPredicted RBP12.62□□□□□ -0.39
UBE3D-206ENST00000505226 IL9RQ01113 521 aa12.62□□□□□ -0.39
UBE3D-206ENST00000505226 STRIP1Q5VSL9 837 aa12.62□□□□□ -0.39
UBE3D-206ENST00000505226 PCNX4Q63HM2 1172 aa12.62□□□□□ -0.39
UBE3D-206ENST00000505226 PPP1R21Q6ZMI0 780 aa12.62□□□□□ -0.39
UBE3D-206ENST00000505226 FAM13CQ8NE31 585 aa12.62□□□□□ -0.39
UBE3D-206ENST00000505226 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.62□□□□□ -0.39
UBE3D-206ENST00000505226 AGO4Q9HCK5 861 aaKnown RBP12.62□□□□□ -0.39
UBE3D-206ENST00000505226 STARD13Q9Y3M8 1113 aa12.62□□□□□ -0.39
UBE3D-206ENST00000505226 THSD7AQ9UPZ6 1657 aa12.62□□□□□ -0.39
UBE3D-206ENST00000505226 A0A1W2PPM1 405 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 ATP9AO75110 1047 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 CBX6O95503 412 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 NPTX2P47972 431 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 NAIF1Q69YI7 327 aaPredicted RBP12.61□□□□□ -0.39
UBE3D-206ENST00000505226 SCARA3Q6AZY7 606 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 ZNF365Q70YC5 407 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 PASD1Q8IV76 773 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 ZCCHC9Q8N567 271 aaKnown RBP12.61□□□□□ -0.39
UBE3D-206ENST00000505226 KIFAP3Q92845 792 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 MRRFQ96E11 262 aaKnown RBP12.61□□□□□ -0.39
UBE3D-206ENST00000505226 MFSD14AQ96MC6 490 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 OSBPL8Q9BZF1 889 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 SAYSD1Q9NPB0 183 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 AVENQ9NQS1 362 aaPredicted RBP12.61□□□□□ -0.39
UBE3D-206ENST00000505226 ZNF646O15015 1829 aaPredicted RBP12.61□□□□□ -0.39
UBE3D-206ENST00000505226 POC1B-GALNT4F8VUJ3 575 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 PI4K2BG5E9Z4 385 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 ECE2O60344 883 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 BANF1O75531 89 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 PROSCO94903 275 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 MAN1A1P33908 653 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 CENPCQ03188 943 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 CCDC142Q17RM4 750 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 TKFCQ3LXA3 575 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 SPOPLQ6IQ16 392 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 MON1BQ7L1V2 547 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 ANKRD35Q8N283 1001 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 DNPEPQ9ULA0 475 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 EXOC1LA0A1B0GW35 172 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 GSTTP1A0A1W2PQM5 241 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 NPR1P16066 1061 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 CYP24A1Q07973 514 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 PLEKHG4Q58EX7 1191 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 CDCA2Q69YH5 1023 aaPredicted RBP12.61□□□□□ -0.39
UBE3D-206ENST00000505226 VSIG1Q86XK7 387 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 OGFOD1Q8N543 542 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 CCDC89Q8N998 374 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 GRAMD1AQ96CP6 724 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 FBXL18Q96ME1 805 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 TBC1D10AQ9BXI6 508 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 SERPINA10Q9UK55 444 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 USTQ9Y2C2 406 aa12.61□□□□□ -0.39
UBE3D-206ENST00000505226 ZNF536O15090 1300 aa12.6□□□□□ -0.39
UBE3D-206ENST00000505226 DENND3A2RUS2 1198 aa12.6□□□□□ -0.39
UBE3D-206ENST00000505226 WFS1O76024 890 aa12.6□□□□□ -0.39
UBE3D-206ENST00000505226 CYP1A1P04798 512 aaPredicted RBP12.6□□□□□ -0.39
UBE3D-206ENST00000505226 EPHB2P29323 1055 aa12.6□□□□□ -0.39
UBE3D-206ENST00000505226 SLC1A1P43005 524 aa12.6□□□□□ -0.39
UBE3D-206ENST00000505226 HSD17B4P51659 736 aa12.6□□□□□ -0.39
UBE3D-206ENST00000505226 MAMLD1Q13495 774 aa12.6□□□□□ -0.39
UBE3D-206ENST00000505226 BLMHQ13867 455 aa12.6□□□□□ -0.39
UBE3D-206ENST00000505226 ZNF449Q6P9G9 518 aa12.6□□□□□ -0.39
UBE3D-206ENST00000505226 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.6□□□□□ -0.39
UBE3D-206ENST00000505226 MAP4K3Q8IVH8 894 aa12.6□□□□□ -0.39
UBE3D-206ENST00000505226 TTC8Q8TAM2 541 aa12.6□□□□□ -0.39
UBE3D-206ENST00000505226 C10orf82Q8WW14 230 aa12.6□□□□□ -0.39
UBE3D-206ENST00000505226 LRRC37BQ96QE4 947 aa12.6□□□□□ -0.39
UBE3D-206ENST00000505226 C11orf70Q9BRQ4 267 aa12.6□□□□□ -0.39
UBE3D-206ENST00000505226 TRABDQ9H4I3 376 aa12.6□□□□□ -0.39
UBE3D-206ENST00000505226 TCP10L2B9ZVM9 353 aa12.6□□□□□ -0.39
UBE3D-206ENST00000505226 EDF1O60869 148 aaKnown RBP12.6□□□□□ -0.39
UBE3D-206ENST00000505226 CCNE2O96020 404 aa12.6□□□□□ -0.39
UBE3D-206ENST00000505226 PECAM1P16284 738 aaPredicted RBP12.6□□□□□ -0.39
UBE3D-206ENST00000505226 PTP4A2Q12974 167 aa12.6□□□□□ -0.39
UBE3D-206ENST00000505226 GRIK3Q13003 919 aa12.6□□□□□ -0.39
UBE3D-206ENST00000505226 PARP6Q2NL67 630 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms