RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 INTS3Q68E01 1043 aaKnown RBP6.56□□□□□ -1.36
CLCN3-204ENST00000504131 KLHL35Q6PF15 583 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 NUP85Q9BW27 656 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 CLK4Q9HAZ1 481 aaKnown RBP6.56□□□□□ -1.36
CLCN3-204ENST00000504131 ARNT2Q9HBZ2 717 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 AGAP1Q9UPQ3 857 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 AURKCQ9UQB9 309 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 INSRP06213 1382 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 TNRQ92752 1358 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 MAPK13O15264 365 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 PPP2R1AP30153 589 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 CRTC2Q53ET0 693 aaPredicted RBP6.56□□□□□ -1.36
CLCN3-204ENST00000504131 ZNF600Q6ZNG1 722 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 TICAM1Q8IUC6 712 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 DENND6AQ8IWF6 608 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 DIS3L2Q8IYB7 885 aaKnown RBP6.56□□□□□ -1.36
CLCN3-204ENST00000504131 COX4I2Q96KJ9 171 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 HEMGNQ9BXL5 484 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 PUS3Q9BZE2 481 aaKnown RBP6.56□□□□□ -1.36
CLCN3-204ENST00000504131 XKR8Q9H6D3 395 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 RUBCNLQ9H714 662 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 HMG20BQ9P0W2 317 aa6.56□□□□□ -1.36
CLCN3-204ENST00000504131 ARAP3Q8WWN8 1544 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 A8MX80 341 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 PLSCR1O15162 318 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 INPPL1O15357 1258 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 ARHGAP6O43182 974 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 HMBSP08397 361 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 PLEKP08567 350 aaPredicted RBP6.55□□□□□ -1.36
CLCN3-204ENST00000504131 STAT3P40763 770 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 CLK3P49761 638 aaKnown RBP6.55□□□□□ -1.36
CLCN3-204ENST00000504131 ALDH6A1Q02252 535 aaKnown RBP6.55□□□□□ -1.36
CLCN3-204ENST00000504131 CHAF1BQ13112 559 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 PAK2Q13177 524 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 PDCLQ13371 301 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 CUL4AQ13619 759 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 LPIN1Q14693 890 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 ATG16L1Q676U5 607 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 OTUD7BQ6GQQ9 843 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 PRR23BQ6ZRT6 265 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 TOGARAM2Q6ZUX3 1019 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 PLD6Q8N2A8 252 aaKnown RBP6.55□□□□□ -1.36
CLCN3-204ENST00000504131 IGSF22Q8N9C0 903 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 SHCBP1Q8NEM2 672 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 UBLCP1Q8WVY7 318 aaPredicted RBP6.55□□□□□ -1.36
CLCN3-204ENST00000504131 CHAMP1Q96JM3 812 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 ASB2Q96Q27 587 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 AVENQ9NQS1 362 aaPredicted RBP6.55□□□□□ -1.36
CLCN3-204ENST00000504131 MTMR4Q9NYA4 1195 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 ANAPC5Q9UJX4 755 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 PCDHGA11Q9Y5H2 935 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 NUTM2BA6NNL0 878 aaPredicted RBP6.55□□□□□ -1.36
CLCN3-204ENST00000504131 NUTM2EB1AL46 878 aaPredicted RBP6.55□□□□□ -1.36
CLCN3-204ENST00000504131 EIF3HO15372 352 aaKnown RBP eCLIP6.55□□□□□ -1.36
CLCN3-204ENST00000504131 TOM1L1O75674 476 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 ACADSP16219 412 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 HTR2BP41595 481 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 SCNN1DP51172 638 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 TTF1Q15361 905 aaPredicted RBP6.55□□□□□ -1.36
CLCN3-204ENST00000504131 ANO4Q32M45 955 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 SEL1L2Q5TEA6 688 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 TTC23LQ6PF05 361 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 TRIM72Q6ZMU5 477 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 NUTM2AQ8IVF1 878 aaPredicted RBP6.55□□□□□ -1.36
CLCN3-204ENST00000504131 SCUBE3Q8IX30 993 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 TTC8Q8TAM2 541 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 ENKURQ8TC29 256 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 ANAPC16Q96DE5 110 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 FRMD6Q96NE9 622 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 ESYT1Q9BSJ8 1104 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 MKNK1Q9BUB5 465 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 OSGEPL1Q9H4B0 414 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 ECT2Q9H8V3 914 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 ATP13A1Q9HD20 1204 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 CCDC59Q9P031 241 aaKnown RBP6.55□□□□□ -1.36
CLCN3-204ENST00000504131 ASH2LQ9UBL3 628 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 RPS6KA6Q9UK32 745 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 HYOU1Q9Y4L1 999 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 ZNF518AQ6AHZ1 1483 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 PCF11O94913 1555 aaKnown RBP6.55□□□□□ -1.36
CLCN3-204ENST00000504131 H3BUI4 141 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 I3L4J1 428 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 CLPTM1O96005 669 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 NTRK1P04629 796 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 IFI30P13284 250 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 POU2F1P14859 743 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 BPIFB4P59827 614 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 RHAGQ02094 409 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 CTC1Q2NKJ3 1217 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 CAVIN4Q5BKX8 364 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 FAM76BQ5HYJ3 339 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 ZNF658Q5TYW1 1059 aaPredicted RBP6.55□□□□□ -1.36
CLCN3-204ENST00000504131 NAA35Q5VZE5 725 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 FAM180AQ6UWF9 173 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 CEP97Q8IW35 865 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 IFNL2Q8IZJ0 200 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 MIGA1Q8NAN2 632 aa6.55□□□□□ -1.36
CLCN3-204ENST00000504131 RBM18Q96H35 190 aaKnown RBP6.55□□□□□ -1.36
CLCN3-204ENST00000504131 MOV10Q9HCE1 1003 aaKnown RBP6.55□□□□□ -1.36
CLCN3-204ENST00000504131 KCNN4O15554 427 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms