RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 TNFRSF8P28908 595 aa22.82■■□□□ 1.24
UBE2D3-216ENST00000503742 TRPC3Q13507 836 aa22.82■■□□□ 1.24
UBE2D3-216ENST00000503742 OLFML2BQ68BL8 750 aa22.82■■□□□ 1.24
UBE2D3-216ENST00000503742 NLRP7Q8WX94 980 aa22.82■■□□□ 1.24
UBE2D3-216ENST00000503742 CPB2Q96IY4 423 aa22.82■■□□□ 1.24
UBE2D3-216ENST00000503742 KRT12Q99456 494 aa22.82■■□□□ 1.24
UBE2D3-216ENST00000503742 SETD4Q9NVD3 440 aa22.82■■□□□ 1.24
UBE2D3-216ENST00000503742 TSPAN1O60635 241 aa22.81■■□□□ 1.24
UBE2D3-216ENST00000503742 IGHA2P01877 340 aa22.81■■□□□ 1.24
UBE2D3-216ENST00000503742 CFHP08603 1231 aa22.81■■□□□ 1.24
UBE2D3-216ENST00000503742 SLC10A3P09131 477 aa22.81■■□□□ 1.24
UBE2D3-216ENST00000503742 MESDQ14696 234 aa22.81■■□□□ 1.24
UBE2D3-216ENST00000503742 CASP8Q14790 479 aa22.81■■□□□ 1.24
UBE2D3-216ENST00000503742 ALG3Q92685 438 aa22.81■■□□□ 1.24
UBE2D3-216ENST00000503742 KAT2BQ92831 832 aa22.81■■□□□ 1.24
UBE2D3-216ENST00000503742 CD101Q93033 1021 aa22.81■■□□□ 1.24
UBE2D3-216ENST00000503742 CYFIP2Q96F07 1278 aa22.81■■□□□ 1.24
UBE2D3-216ENST00000503742 LACTBL1A8MY62 500 aa22.81■■□□□ 1.24
UBE2D3-216ENST00000503742 MYBL1P10243 752 aa22.81■■□□□ 1.24
UBE2D3-216ENST00000503742 COMTP21964 271 aa22.81■■□□□ 1.24
UBE2D3-216ENST00000503742 INHBEP58166 350 aa22.81■■□□□ 1.24
UBE2D3-216ENST00000503742 CPA5Q8WXQ8 436 aa22.81■■□□□ 1.24
UBE2D3-216ENST00000503742 TRIM11Q96F44 468 aa22.81■■□□□ 1.24
UBE2D3-216ENST00000503742 GJD2Q9UKL4 321 aa22.81■■□□□ 1.24
UBE2D3-216ENST00000503742 CCDC188H7C350 402 aa22.8■■□□□ 1.24
UBE2D3-216ENST00000503742 NOMO3P69849 1222 aa22.8■■□□□ 1.24
UBE2D3-216ENST00000503742 CCL14Q16627 93 aa22.8■■□□□ 1.24
UBE2D3-216ENST00000503742 KYAT1Q16773 422 aa22.8■■□□□ 1.24
UBE2D3-216ENST00000503742 ZNF699Q32M78 642 aa22.8■■□□□ 1.24
UBE2D3-216ENST00000503742 NAA35Q5VZE5 725 aa22.8■■□□□ 1.24
UBE2D3-216ENST00000503742 MON1BQ7L1V2 547 aa22.8■■□□□ 1.24
UBE2D3-216ENST00000503742 TLK2Q86UE8 772 aa22.8■■□□□ 1.24
UBE2D3-216ENST00000503742 AENQ8WTP8 325 aaKnown RBP22.8■■□□□ 1.24
UBE2D3-216ENST00000503742 GDF3Q9NR23 364 aa22.8■■□□□ 1.24
UBE2D3-216ENST00000503742 NRCAMQ92823 1304 aa22.8■■□□□ 1.24
UBE2D3-216ENST00000503742 A0A1B0GUA9 196 aa22.8■■□□□ 1.24
UBE2D3-216ENST00000503742 CLSTN1O94985 981 aa22.8■■□□□ 1.24
UBE2D3-216ENST00000503742 GLI1P08151 1106 aa22.8■■□□□ 1.24
UBE2D3-216ENST00000503742 NFICP08651 508 aa22.8■■□□□ 1.24
UBE2D3-216ENST00000503742 SMIM10L2AP0DMW4 78 aa22.8■■□□□ 1.24
UBE2D3-216ENST00000503742 SMIM10L2BP0DMW5 78 aa22.8■■□□□ 1.24
UBE2D3-216ENST00000503742 CYP2C19P33261 490 aa22.8■■□□□ 1.24
UBE2D3-216ENST00000503742 ASPAP45381 313 aa22.8■■□□□ 1.24
UBE2D3-216ENST00000503742 PEX5P50542 639 aa22.8■■□□□ 1.24
UBE2D3-216ENST00000503742 HINFPQ9BQA5 517 aa22.8■■□□□ 1.24
UBE2D3-216ENST00000503742 ZSWIM1Q9BR11 485 aa22.8■■□□□ 1.24
UBE2D3-216ENST00000503742 WNT8AQ9H1J5 351 aa22.8■■□□□ 1.24
UBE2D3-216ENST00000503742 ADAMTS10Q9H324 1103 aa22.8■■□□□ 1.24
UBE2D3-216ENST00000503742 ASB7Q9H672 318 aa22.8■■□□□ 1.24
UBE2D3-216ENST00000503742 CISHQ9NSE2 258 aa22.8■■□□□ 1.24
UBE2D3-216ENST00000503742 SIX4Q9UIU6 781 aa22.8■■□□□ 1.24
UBE2D3-216ENST00000503742 PRDM4Q9UKN5 801 aa22.8■■□□□ 1.24
UBE2D3-216ENST00000503742 TMEM110-MUSTN1A8MSY1 372 aa22.79■■□□□ 1.24
UBE2D3-216ENST00000503742 NSFP46459 744 aaKnown RBP22.79■■□□□ 1.24
UBE2D3-216ENST00000503742 GSPT2Q8IYD1 628 aaKnown RBP22.79■■□□□ 1.24
UBE2D3-216ENST00000503742 UBL4BQ8N7F7 174 aa22.79■■□□□ 1.24
UBE2D3-216ENST00000503742 CXorf38Q8TB03 319 aa22.79■■□□□ 1.24
UBE2D3-216ENST00000503742 ZNF606Q8WXB4 792 aa22.79■■□□□ 1.24
UBE2D3-216ENST00000503742 KRT35Q92764 455 aa22.79■■□□□ 1.24
UBE2D3-216ENST00000503742 BTBD6Q96KE9 485 aa22.79■■□□□ 1.24
UBE2D3-216ENST00000503742 RNPC3Q96LT9 517 aaKnown RBP22.79■■□□□ 1.24
UBE2D3-216ENST00000503742 AP1M1Q9BXS5 423 aa22.79■■□□□ 1.24
UBE2D3-216ENST00000503742 MBLAC1A4D2B0 266 aaPredicted RBP22.78■■□□□ 1.24
UBE2D3-216ENST00000503742 KRIT1O00522 736 aa22.78■■□□□ 1.24
UBE2D3-216ENST00000503742 THAP12O43422 761 aa22.78■■□□□ 1.24
UBE2D3-216ENST00000503742 RAD51CO43502 376 aa22.78■■□□□ 1.24
UBE2D3-216ENST00000503742 RGS2P41220 211 aa22.78■■□□□ 1.24
UBE2D3-216ENST00000503742 SLC10A6Q3KNW5 377 aa22.78■■□□□ 1.24
UBE2D3-216ENST00000503742 JADE1Q6IE81 842 aa22.78■■□□□ 1.24
UBE2D3-216ENST00000503742 PHF13Q86YI8 300 aaPredicted RBP22.78■■□□□ 1.24
UBE2D3-216ENST00000503742 C1orf127Q8N9H9 656 aa22.78■■□□□ 1.24
UBE2D3-216ENST00000503742 LENG1Q96BZ8 264 aaPredicted RBP22.78■■□□□ 1.24
UBE2D3-216ENST00000503742 VCPIP1Q96JH7 1222 aa22.78■■□□□ 1.24
UBE2D3-216ENST00000503742 SCLT1Q96NL6 688 aa22.78■■□□□ 1.24
UBE2D3-216ENST00000503742 FAM155AB1AL88 458 aaPredicted RBP22.78■■□□□ 1.24
UBE2D3-216ENST00000503742 ERLIN2O94905 339 aa22.78■■□□□ 1.24
UBE2D3-216ENST00000503742 HEXIM1O94992 359 aaKnown RBP22.78■■□□□ 1.24
UBE2D3-216ENST00000503742 FGGP02679 453 aa22.78■■□□□ 1.24
UBE2D3-216ENST00000503742 ITGA4P13612 1032 aa22.78■■□□□ 1.24
UBE2D3-216ENST00000503742 CYP2B6P20813 491 aa22.78■■□□□ 1.24
UBE2D3-216ENST00000503742 RRM1P23921 792 aa22.78■■□□□ 1.24
UBE2D3-216ENST00000503742 CDC42EP1Q00587 391 aa22.78■■□□□ 1.24
UBE2D3-216ENST00000503742 PPP1R2P3Q6NXS1 205 aa22.78■■□□□ 1.24
UBE2D3-216ENST00000503742 KLHL7Q8IXQ5 586 aa22.78■■□□□ 1.24
UBE2D3-216ENST00000503742 FAXDC2Q96IV6 333 aa22.78■■□□□ 1.24
UBE2D3-216ENST00000503742 PASKQ96RG2 1323 aa22.77■■□□□ 1.24
UBE2D3-216ENST00000503742 HAS3O00219 553 aa22.77■■□□□ 1.24
UBE2D3-216ENST00000503742 GPR32O75388 356 aa22.77■■□□□ 1.24
UBE2D3-216ENST00000503742 CTNNA2P26232 953 aa22.77■■□□□ 1.24
UBE2D3-216ENST00000503742 MARCKSL1P49006 195 aa22.77■■□□□ 1.24
UBE2D3-216ENST00000503742 IRX5P78411 483 aaPredicted RBP22.77■■□□□ 1.24
UBE2D3-216ENST00000503742 PTP4A2Q12974 167 aa22.77■■□□□ 1.24
UBE2D3-216ENST00000503742 SMC1AQ14683 1233 aaKnown RBP22.77■■□□□ 1.24
UBE2D3-216ENST00000503742 IFT20Q8IY31 132 aa22.77■■□□□ 1.24
UBE2D3-216ENST00000503742 SOCS4Q8WXH5 440 aa22.77■■□□□ 1.24
UBE2D3-216ENST00000503742 APBA2Q99767 749 aa22.77■■□□□ 1.24
UBE2D3-216ENST00000503742 VIPAS39Q9H9C1 493 aa22.77■■□□□ 1.24
UBE2D3-216ENST00000503742 ZFYVE28Q9HCC9 887 aa22.77■■□□□ 1.24
UBE2D3-216ENST00000503742 Q9Y3F1 56 aa22.77■■□□□ 1.24
UBE2D3-216ENST00000503742 MROH7Q68CQ1 1323 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms