RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 ASB7Q9H672 318 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 ZNHIT6Q9NWK9 470 aaKnown RBP7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 KLK14Q9P0G3 267 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 CNTN3Q9P232 1028 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 TUBGCP4Q9UGJ1 667 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 NOCTQ9UK39 431 aaKnown RBP7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 PADI3Q9ULW8 664 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 CNTN6Q9UQ52 1028 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 C2CD2Q9Y426 696 aa7.43□□□□□ -1.22
TOPBP1-203ENST00000503464 COL4A6Q14031 1691 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 PTGESO14684 152 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 CYP26A1O43174 497 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 NRDCO43847 1150 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 PHACTR2O75167 634 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 SGPL1O95470 568 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 TNNC2P02585 160 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 ITGB3P05106 788 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 CCDC175P0C221 793 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 TMEM191BP0C7N4 346 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 HSPA1AP0DMV8 641 aaKnown RBP7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 HSPA1BP0DMV9 641 aaKnown RBP7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 KCNE1P15382 129 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 FERP16591 822 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 ZNF132P52740 706 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 MFAP3P55082 362 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 NFX1Q12986 1120 aaKnown RBP7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 CUL2Q13617 745 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 TMEM132DQ14C87 1099 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 NAB2Q15742 525 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 SLC18A3Q16572 532 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 TSR1Q2NL82 804 aaKnown RBP7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 TDRD12Q587J7 1177 aaKnown RBP7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 TWF2Q6IBS0 349 aaKnown RBP7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 RTN4RL1Q86UN2 441 aaPredicted RBP7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 SLC47A2Q86VL8 602 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 U2AF1L4Q8WU68 220 aaKnown RBP7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 DDX1Q92499 740 aaKnown RBP7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 LPPQ93052 612 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 KIF12Q96FN5 646 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 ANKRD36BP1Q96IX9 119 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 CCDC42Q96M95 316 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 ZFP42Q96MM3 310 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 PCDHB18PQ96TA0 734 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 ZSWIM1Q9BR11 485 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 CCDC94Q9BW85 323 aaPredicted RBP7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 APOL6Q9BWW8 343 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 PACSIN1Q9BY11 444 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 IRX2Q9BZI1 471 aaPredicted RBP7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 PLEKHA5Q9HAU0 1116 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 CHST12Q9NRB3 414 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 C1orf112Q9NSG2 853 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 FAM105AQ9NUU6 356 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 POLIQ9UNA4 740 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 DERAQ9Y315 318 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 PCDHB2Q9Y5E7 798 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 PTPRSQ13332 1948 aa7.42□□□□□ -1.22
TOPBP1-203ENST00000503464 FNDC1Q4ZHG4 1894 aaPredicted RBP7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 SMIM28A0A1B0GU29 152 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 ANO9A1A5B4 782 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 GPR182O15218 404 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 ZSCAN12O43309 604 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 NBNO60934 754 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 STAU1O95793 577 aaKnown RBP7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 IGFBP6P24592 240 aaPredicted RBP7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 POLR2BP30876 1174 aaKnown RBP7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 CYLC1P35663 651 aaPredicted RBP7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 RAP1GAPP47736 663 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 VAV2P52735 878 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 FMO1Q01740 532 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 NCBP1Q09161 790 aaKnown RBP7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 PAK2Q13177 524 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 SGSM1Q2NKQ1 1148 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 ZNF699Q32M78 642 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 WDR44Q5JSH3 913 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 SLC39A5Q6ZMH5 540 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 AGMOQ6ZNB7 445 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 ZNF662Q6ZS27 426 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 ENOSF1Q7L5Y1 443 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 ANKRD33Q7Z3H0 272 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 APBB1IPQ7Z5R6 666 aaPredicted RBP7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 MRPL10Q7Z7H8 261 aaKnown RBP7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 ZNF598Q86UK7 904 aaKnown RBP7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 NT5DC4Q86YG4 428 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 CD302Q8IX05 232 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 WHAMMQ8TF30 809 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 VWCEQ96DN2 955 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 PPP1R10Q96QC0 940 aaKnown RBP7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 TRAIPQ9BWF2 469 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 BCO2Q9BYV7 579 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 TRIM6Q9C030 488 aaPredicted RBP7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 NIF3L1Q9GZT8 377 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 SMYD3Q9H7B4 428 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 VRTNQ9H8Y1 702 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 GOLGA2P5Q9HBQ8 144 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 LZTFL1Q9NQ48 299 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 MIOSQ9NXC5 875 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 DPP3Q9NY33 737 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 TAS2R14Q9NYV8 317 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 CACNG4Q9UBN1 327 aa7.41□□□□□ -1.22
TOPBP1-203ENST00000503464 ADAMTS1Q9UHI8 967 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms