RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 MDH1P40925 334 aaKnown RBP12.77□□□□□ -0.36
NUP54-202ENST00000502850 ACOT2P49753 483 aa12.77□□□□□ -0.36
NUP54-202ENST00000502850 PMS2P54278 862 aa12.77□□□□□ -0.36
NUP54-202ENST00000502850 YWHAEP62258 255 aaKnown RBP12.77□□□□□ -0.36
NUP54-202ENST00000502850 CAV1Q03135 178 aa12.77□□□□□ -0.36
NUP54-202ENST00000502850 CALCOCO2Q13137 446 aa12.77□□□□□ -0.36
NUP54-202ENST00000502850 CAPSQ13938 189 aa12.77□□□□□ -0.36
NUP54-202ENST00000502850 TFDP1Q14186 410 aa12.77□□□□□ -0.36
NUP54-202ENST00000502850 TREML2Q5T2D2 321 aa12.77□□□□□ -0.36
NUP54-202ENST00000502850 CRELD2Q6UXH1 353 aaPredicted RBP12.77□□□□□ -0.36
NUP54-202ENST00000502850 GADL1Q6ZQY3 521 aa12.77□□□□□ -0.36
NUP54-202ENST00000502850 CEP128Q6ZU80 1094 aa12.77□□□□□ -0.36
NUP54-202ENST00000502850 MICALCLQ6ZW33 695 aa12.77□□□□□ -0.36
NUP54-202ENST00000502850 MON1BQ7L1V2 547 aa12.77□□□□□ -0.36
NUP54-202ENST00000502850 PLPPR4Q7Z2D5 763 aa12.77□□□□□ -0.36
NUP54-202ENST00000502850 ADAT2Q7Z6V5 191 aaKnown RBP12.77□□□□□ -0.36
NUP54-202ENST00000502850 ERO1BQ86YB8 467 aa12.77□□□□□ -0.36
NUP54-202ENST00000502850 PHF13Q86YI8 300 aaPredicted RBP12.77□□□□□ -0.36
NUP54-202ENST00000502850 ABRAQ8N0Z2 381 aa12.77□□□□□ -0.36
NUP54-202ENST00000502850 SH2D3CQ8N5H7 860 aa12.77□□□□□ -0.36
NUP54-202ENST00000502850 C18orf8Q96DM3 657 aa12.77□□□□□ -0.36
NUP54-202ENST00000502850 TARS2Q9BW92 718 aaKnown RBP12.77□□□□□ -0.36
NUP54-202ENST00000502850 TRIM31Q9BZY9 425 aa12.77□□□□□ -0.36
NUP54-202ENST00000502850 BTBD7Q9P203 1132 aa12.77□□□□□ -0.36
NUP54-202ENST00000502850 RSPH14Q9UHP6 348 aa12.77□□□□□ -0.36
NUP54-202ENST00000502850 RRP15Q9Y3B9 282 aaKnown RBP12.77□□□□□ -0.36
NUP54-202ENST00000502850 NR2E1Q9Y466 385 aa12.77□□□□□ -0.36
NUP54-202ENST00000502850 SOWAHBA6NEL2 793 aa12.77□□□□□ -0.37
NUP54-202ENST00000502850 NOP56O00567 594 aaKnown RBP12.77□□□□□ -0.37
NUP54-202ENST00000502850 SORBS3O60504 671 aa12.77□□□□□ -0.37
NUP54-202ENST00000502850 LGR5O75473 907 aa12.77□□□□□ -0.37
NUP54-202ENST00000502850 PROSCO94903 275 aa12.77□□□□□ -0.37
NUP54-202ENST00000502850 VNN1O95497 513 aa12.77□□□□□ -0.37
NUP54-202ENST00000502850 GAS8O95995 478 aa12.77□□□□□ -0.37
NUP54-202ENST00000502850 CALB1P05937 261 aa12.77□□□□□ -0.37
NUP54-202ENST00000502850 HSPA8P11142 646 aaKnown RBP12.77□□□□□ -0.37
NUP54-202ENST00000502850 ACO1P21399 889 aaKnown RBP12.77□□□□□ -0.37
NUP54-202ENST00000502850 NCOA4Q13772 614 aa12.77□□□□□ -0.37
NUP54-202ENST00000502850 KRT71Q3SY84 523 aa12.77□□□□□ -0.37
NUP54-202ENST00000502850 SGO2Q562F6 1265 aa12.77□□□□□ -0.37
NUP54-202ENST00000502850 RHOT1Q8IXI2 618 aa12.77□□□□□ -0.37
NUP54-202ENST00000502850 RBBP8NLQ8NC74 664 aaPredicted RBP12.77□□□□□ -0.37
NUP54-202ENST00000502850 EPN3Q9H201 632 aa12.77□□□□□ -0.37
NUP54-202ENST00000502850 CENPHQ9H3R5 247 aa12.77□□□□□ -0.37
NUP54-202ENST00000502850 ACP6Q9NPH0 428 aa12.77□□□□□ -0.37
NUP54-202ENST00000502850 WHRNQ9P202 907 aa12.77□□□□□ -0.37
NUP54-202ENST00000502850 FZD1Q9UP38 647 aa12.77□□□□□ -0.37
NUP54-202ENST00000502850 ATP8A1Q9Y2Q0 1164 aa12.77□□□□□ -0.37
NUP54-202ENST00000502850 MROH7Q68CQ1 1323 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 CNTNAP2Q9UHC6 1331 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 TULP2O00295 520 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 NDUFAB1O14561 156 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 NDC80O14777 642 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 OGTO15294 1046 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 RRM1P23921 792 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 LSP1P33241 339 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 ATP1A2P50993 1020 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 PLTPP55058 493 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 PPP2R2AP63151 447 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 NOMO3P69849 1222 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 TAP1Q03518 808 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 ADCY2Q08462 1091 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 PDCLQ13371 301 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 PRKG1Q13976 671 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 PPP1R7Q15435 360 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 MAPK6Q16659 721 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 ODF2Q5BJF6 829 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 TMEM270Q6UE05 265 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 ARMC9Q7Z3E5 817 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 ANKRD13AQ8IZ07 590 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 BBOF1Q8ND07 529 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 GTF3C2Q8WUA4 911 aaPredicted RBP12.76□□□□□ -0.37
NUP54-202ENST00000502850 GLG1Q92896 1179 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 CDCA5Q96FF9 252 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 FAXDC2Q96IV6 333 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 PCYT2Q99447 389 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 ZNF518BQ9C0D4 1074 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 PARVAQ9NVD7 372 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 GRHL1Q9NZI5 618 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 ADAM22Q9P0K1 906 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 AGTPBP1Q9UPW5 1226 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 SNX24Q9Y343 169 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 TELO2Q9Y4R8 837 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 ZSWIM8A7E2V4 1837 aa12.76□□□□□ -0.37
NUP54-202ENST00000502850 ASAP2O43150 1006 aa12.75□□□□□ -0.37
NUP54-202ENST00000502850 THAP12O43422 761 aa12.75□□□□□ -0.37
NUP54-202ENST00000502850 CAPN15O75808 1086 aa12.75□□□□□ -0.37
NUP54-202ENST00000502850 ASS1P00966 412 aaKnown RBP12.75□□□□□ -0.37
NUP54-202ENST00000502850 PRKCBP05771 671 aa12.75□□□□□ -0.37
NUP54-202ENST00000502850 RARAP10276 462 aa12.75□□□□□ -0.37
NUP54-202ENST00000502850 OSBPP22059 807 aa12.75□□□□□ -0.37
NUP54-202ENST00000502850 ZNF132P52740 706 aa12.75□□□□□ -0.37
NUP54-202ENST00000502850 MCL1Q07820 350 aa12.75□□□□□ -0.37
NUP54-202ENST00000502850 NOGQ13253 232 aa12.75□□□□□ -0.37
NUP54-202ENST00000502850 KCTD2Q14681 263 aa12.75□□□□□ -0.37
NUP54-202ENST00000502850 SIX1Q15475 284 aaPredicted RBP12.75□□□□□ -0.37
NUP54-202ENST00000502850 DUOXA2Q1HG44 320 aa12.75□□□□□ -0.37
NUP54-202ENST00000502850 LMBRD2Q68DH5 695 aaPredicted RBP12.75□□□□□ -0.37
NUP54-202ENST00000502850 RGMBQ6NW40 437 aa12.75□□□□□ -0.37
NUP54-202ENST00000502850 ZDHHC24Q6UX98 284 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms