RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 DAW1Q8N136 415 aa13.15□□□□□ -0.3
CNOT4-211ENST00000498534 SPIRE2Q8WWL2 714 aa13.15□□□□□ -0.3
CNOT4-211ENST00000498534 ATRIPQ8WXE1 791 aa13.15□□□□□ -0.3
CNOT4-211ENST00000498534 ELSPBP1Q96BH3 223 aa13.15□□□□□ -0.3
CNOT4-211ENST00000498534 ZNF512Q96ME7 567 aaPredicted RBP13.15□□□□□ -0.3
CNOT4-211ENST00000498534 RUSC1Q9BVN2 902 aa13.15□□□□□ -0.3
CNOT4-211ENST00000498534 ZFP14Q9HCL3 533 aa13.15□□□□□ -0.3
CNOT4-211ENST00000498534 CNTN3Q9P232 1028 aa13.15□□□□□ -0.3
CNOT4-211ENST00000498534 MAFFQ9ULX9 164 aa13.15□□□□□ -0.3
CNOT4-211ENST00000498534 MTF2Q9Y483 593 aaPredicted RBP13.15□□□□□ -0.3
CNOT4-211ENST00000498534 WDR27A2RRH5 827 aa13.14□□□□□ -0.31
CNOT4-211ENST00000498534 PP2D1A8MPX8 630 aa13.14□□□□□ -0.31
CNOT4-211ENST00000498534 CLDN3O15551 220 aa13.14□□□□□ -0.31
CNOT4-211ENST00000498534 TBC1D4O60343 1298 aa13.14□□□□□ -0.31
CNOT4-211ENST00000498534 TOM1L1O75674 476 aa13.14□□□□□ -0.31
CNOT4-211ENST00000498534 MICAL2O94851 1124 aa13.14□□□□□ -0.31
CNOT4-211ENST00000498534 PROZP22891 400 aa13.14□□□□□ -0.31
CNOT4-211ENST00000498534 GUCY2CP25092 1073 aa13.14□□□□□ -0.31
CNOT4-211ENST00000498534 MCM4P33991 863 aa13.14□□□□□ -0.31
CNOT4-211ENST00000498534 MATR3P43243 847 aaKnown RBP eCLIP13.14□□□□□ -0.311e-6■■■■□ 20.8
CNOT4-211ENST00000498534 CSTF1Q05048 431 aaKnown RBP13.14□□□□□ -0.31
CNOT4-211ENST00000498534 MRPL58Q14197 206 aaKnown RBP13.14□□□□□ -0.31
CNOT4-211ENST00000498534 SLC5A9Q2M3M2 681 aa13.14□□□□□ -0.31
CNOT4-211ENST00000498534 MCTP1Q6DN14 999 aa13.14□□□□□ -0.31
CNOT4-211ENST00000498534 TANGO2Q6ICL3 276 aa13.14□□□□□ -0.31
CNOT4-211ENST00000498534 TPRG1Q6ZUI0 275 aa13.14□□□□□ -0.31
CNOT4-211ENST00000498534 PDZD4Q76G19 769 aaPredicted RBP13.14□□□□□ -0.31
CNOT4-211ENST00000498534 TAS1R3Q7RTX0 852 aa13.14□□□□□ -0.31
CNOT4-211ENST00000498534 KIAA2013Q8IYS2 634 aa13.14□□□□□ -0.31
CNOT4-211ENST00000498534 C18orf25Q96B23 403 aaPredicted RBP13.14□□□□□ -0.31
CNOT4-211ENST00000498534 CDK5RAP3Q96JB5 506 aa13.14□□□□□ -0.31
CNOT4-211ENST00000498534 SUSD3Q96L08 255 aa13.14□□□□□ -0.31
CNOT4-211ENST00000498534 BRD9Q9H8M2 597 aa13.14□□□□□ -0.31
CNOT4-211ENST00000498534 LTB4R2Q9NPC1 389 aa13.14□□□□□ -0.31
CNOT4-211ENST00000498534 FBXL5Q9UKA1 691 aa13.14□□□□□ -0.31
CNOT4-211ENST00000498534 NOTCH4Q99466 2003 aa13.13□□□□□ -0.31
CNOT4-211ENST00000498534 FRYLO94915 3013 aa13.13□□□□□ -0.31
CNOT4-211ENST00000498534 H0YCG3 227 aa13.13□□□□□ -0.31
CNOT4-211ENST00000498534 MAN2B1O00754 1011 aa13.13□□□□□ -0.31
CNOT4-211ENST00000498534 PLS3P13797 630 aa13.13□□□□□ -0.31
CNOT4-211ENST00000498534 CEBPBP17676 345 aa13.13□□□□□ -0.31
CNOT4-211ENST00000498534 ADCY1Q08828 1119 aa13.13□□□□□ -0.31
CNOT4-211ENST00000498534 RAD51AP2Q09MP3 1159 aa13.13□□□□□ -0.31
CNOT4-211ENST00000498534 MAPK7Q13164 816 aa13.13□□□□□ -0.31
CNOT4-211ENST00000498534 NOLC1Q14978 699 aaKnown RBP eCLIP13.13□□□□□ -0.31
CNOT4-211ENST00000498534 IL17AQ16552 155 aa13.13□□□□□ -0.31
CNOT4-211ENST00000498534 SLC10A6Q3KNW5 377 aa13.13□□□□□ -0.31
CNOT4-211ENST00000498534 RILPL1Q5EBL4 403 aa13.13□□□□□ -0.31
CNOT4-211ENST00000498534 ZNF280DQ6N043 979 aa13.13□□□□□ -0.31
CNOT4-211ENST00000498534 ZPBP2Q6X784 338 aa13.13□□□□□ -0.31
CNOT4-211ENST00000498534 MAML2Q8IZL2 1156 aaPredicted RBP13.13□□□□□ -0.31
CNOT4-211ENST00000498534 DNASE1L2Q92874 299 aa13.13□□□□□ -0.31
CNOT4-211ENST00000498534 CLDN23Q96B33 292 aa13.13□□□□□ -0.31
CNOT4-211ENST00000498534 ZBTB45Q96K62 511 aaPredicted RBP13.13□□□□□ -0.31
CNOT4-211ENST00000498534 TBC1D32Q96NH3 1257 aa13.13□□□□□ -0.31
CNOT4-211ENST00000498534 TRMT61BQ9BVS5 477 aaKnown RBP13.13□□□□□ -0.31
CNOT4-211ENST00000498534 OXCT2Q9BYC2 517 aaPredicted RBP13.13□□□□□ -0.31
CNOT4-211ENST00000498534 PLA2G2FQ9BZM2 168 aa13.13□□□□□ -0.31
CNOT4-211ENST00000498534 PLEKHA5Q9HAU0 1116 aa13.13□□□□□ -0.31
CNOT4-211ENST00000498534 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.13□□□□□ -0.31
CNOT4-211ENST00000498534 KCND2Q9NZV8 630 aa13.13□□□□□ -0.31
CNOT4-211ENST00000498534 ANKFY1Q9P2R3 1169 aa13.13□□□□□ -0.31
CNOT4-211ENST00000498534 AFF4Q9UHB7 1163 aaKnown RBP13.13□□□□□ -0.31
CNOT4-211ENST00000498534 INSL5Q9Y5Q6 135 aa13.13□□□□□ -0.31
CNOT4-211ENST00000498534 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.13□□□□□ -0.31
CNOT4-211ENST00000498534 MIA3Q5JRA6 1907 aa13.13□□□□□ -0.31
CNOT4-211ENST00000498534 SEC24AO95486 1093 aa13.12□□□□□ -0.31
CNOT4-211ENST00000498534 CLTAP09496 248 aa13.12□□□□□ -0.31
CNOT4-211ENST00000498534 CPB1P15086 417 aa13.12□□□□□ -0.31
CNOT4-211ENST00000498534 RPS9P46781 194 aaKnown RBP13.12□□□□□ -0.31
CNOT4-211ENST00000498534 KYAT1Q16773 422 aa13.12□□□□□ -0.31
CNOT4-211ENST00000498534 FAM78AQ5JUQ0 283 aa13.12□□□□□ -0.31
CNOT4-211ENST00000498534 KCNK18Q7Z418 384 aa13.12□□□□□ -0.31
CNOT4-211ENST00000498534 SYT2Q8N9I0 419 aaPredicted RBP13.12□□□□□ -0.31
CNOT4-211ENST00000498534 LEMD2Q8NC56 503 aa13.12□□□□□ -0.31
CNOT4-211ENST00000498534 TMEM161BQ8NDZ6 487 aa13.12□□□□□ -0.31
CNOT4-211ENST00000498534 DDX12PQ92771 950 aa13.12□□□□□ -0.31
CNOT4-211ENST00000498534 IRF7Q92985 503 aa13.12□□□□□ -0.31
CNOT4-211ENST00000498534 SECISBP2LQ93073 1101 aaKnown RBP13.12□□□□□ -0.31
CNOT4-211ENST00000498534 BICD1Q96G01 975 aa13.12□□□□□ -0.31
CNOT4-211ENST00000498534 MMTAG2Q9BU76 263 aaKnown RBP13.12□□□□□ -0.31
CNOT4-211ENST00000498534 HEBP1Q9NRV9 189 aa13.12□□□□□ -0.31
CNOT4-211ENST00000498534 LARSQ9P2J5 1176 aaKnown RBP13.12□□□□□ -0.31
CNOT4-211ENST00000498534 PCDHGA2Q9Y5H1 932 aa13.12□□□□□ -0.31
CNOT4-211ENST00000498534 CITO14578 2027 aa13.12□□□□□ -0.31
CNOT4-211ENST00000498534 ABLIM1O14639 778 aa13.11□□□□□ -0.31
CNOT4-211ENST00000498534 SPTLC1O15269 473 aa13.11□□□□□ -0.31
CNOT4-211ENST00000498534 PLA2G4BP0C869 781 aa13.11□□□□□ -0.31
CNOT4-211ENST00000498534 MAPTP10636 758 aaKnown RBP13.11□□□□□ -0.31
CNOT4-211ENST00000498534 MYL4P12829 197 aa13.11□□□□□ -0.31
CNOT4-211ENST00000498534 TARSP26639 723 aaKnown RBP13.11□□□□□ -0.31
CNOT4-211ENST00000498534 YWHAHQ04917 246 aaPredicted RBP13.11□□□□□ -0.31
CNOT4-211ENST00000498534 MCL1Q07820 350 aa13.11□□□□□ -0.31
CNOT4-211ENST00000498534 TWF1Q12792 350 aa13.11□□□□□ -0.31
CNOT4-211ENST00000498534 SEZ6Q53EL9 994 aa13.11□□□□□ -0.31
CNOT4-211ENST00000498534 PRSS36Q5K4E3 855 aa13.11□□□□□ -0.31
CNOT4-211ENST00000498534 HYIQ5T013 277 aa13.11□□□□□ -0.31
CNOT4-211ENST00000498534 USP37Q86T82 979 aa13.11□□□□□ -0.31
CNOT4-211ENST00000498534 GPR161Q8N6U8 529 aaKnown RBP13.11□□□□□ -0.31
CNOT4-211ENST00000498534 SUMF1Q8NBK3 374 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms