RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 GDF9O60383 454 aa15.29■□□□□ 0.04
CCDC58-207ENST00000498466 MYL4P12829 197 aa15.29■□□□□ 0.04
CCDC58-207ENST00000498466 GJA1P17302 382 aa15.29■□□□□ 0.04
CCDC58-207ENST00000498466 OSTNP61366 133 aa15.29■□□□□ 0.04
CCDC58-207ENST00000498466 DMWDQ09019 674 aa15.29■□□□□ 0.04
CCDC58-207ENST00000498466 TWF1Q12792 350 aa15.29■□□□□ 0.04
CCDC58-207ENST00000498466 SRSF5Q13243 272 aaKnown RBP15.29■□□□□ 0.04
CCDC58-207ENST00000498466 LRRC32Q14392 662 aa15.29■□□□□ 0.04
CCDC58-207ENST00000498466 GAS6Q14393 721 aa15.29■□□□□ 0.04
CCDC58-207ENST00000498466 CTXN3Q4LDR2 81 aa15.29■□□□□ 0.04
CCDC58-207ENST00000498466 TPGS2Q68CL5 300 aa15.29■□□□□ 0.04
CCDC58-207ENST00000498466 MFSD6LQ8IWD5 586 aa15.29■□□□□ 0.04
CCDC58-207ENST00000498466 SPEM1Q8N4L4 309 aa15.29■□□□□ 0.04
CCDC58-207ENST00000498466 CEP120Q8N960 986 aa15.29■□□□□ 0.04
CCDC58-207ENST00000498466 CSGALNACT1Q8TDX6 532 aa15.29■□□□□ 0.04
CCDC58-207ENST00000498466 POLR3CQ9BUI4 534 aaPredicted RBP15.29■□□□□ 0.04
CCDC58-207ENST00000498466 CCDC94Q9BW85 323 aaPredicted RBP15.29■□□□□ 0.04
CCDC58-207ENST00000498466 TMEM60Q9H2L4 133 aa15.29■□□□□ 0.04
CCDC58-207ENST00000498466 SLITRK6Q9H5Y7 841 aa15.29■□□□□ 0.04
CCDC58-207ENST00000498466 POLD4Q9HCU8 107 aa15.29■□□□□ 0.04
CCDC58-207ENST00000498466 ASAH2Q9NR71 780 aa15.29■□□□□ 0.04
CCDC58-207ENST00000498466 FBXL5Q9UKA1 691 aa15.29■□□□□ 0.04
CCDC58-207ENST00000498466 HEPACAM2A8MVW5 462 aa15.28■□□□□ 0.04
CCDC58-207ENST00000498466 MOSPD3O75425 235 aa15.28■□□□□ 0.04
CCDC58-207ENST00000498466 FDPSP14324 419 aaKnown RBP15.28■□□□□ 0.04
CCDC58-207ENST00000498466 MCM7P33993 719 aa15.28■□□□□ 0.04
CCDC58-207ENST00000498466 CNR2P34972 360 aa15.28■□□□□ 0.04
CCDC58-207ENST00000498466 GRM5P41594 1212 aa15.28■□□□□ 0.04
CCDC58-207ENST00000498466 KPNA1P52294 538 aaPredicted RBP15.28■□□□□ 0.04
CCDC58-207ENST00000498466 FOSBP53539 338 aa15.28■□□□□ 0.04
CCDC58-207ENST00000498466 PTGDRQ13258 359 aa15.28■□□□□ 0.04
CCDC58-207ENST00000498466 HEATR6Q6AI08 1181 aaKnown RBP15.28■□□□□ 0.04
CCDC58-207ENST00000498466 LONP2Q86WA8 852 aa15.28■□□□□ 0.04
CCDC58-207ENST00000498466 YAF2Q8IY57 180 aa15.28■□□□□ 0.04
CCDC58-207ENST00000498466 DIS3L2Q8IYB7 885 aaKnown RBP15.28■□□□□ 0.04
CCDC58-207ENST00000498466 LEMD2Q8NC56 503 aa15.28■□□□□ 0.04
CCDC58-207ENST00000498466 ERMNQ8TAM6 284 aa15.28■□□□□ 0.04
CCDC58-207ENST00000498466 DDX1Q92499 740 aaKnown RBP15.28■□□□□ 0.04
CCDC58-207ENST00000498466 MSANTD3Q96H12 275 aa15.28■□□□□ 0.04
CCDC58-207ENST00000498466 TRPV4Q9HBA0 871 aa15.28■□□□□ 0.04
CCDC58-207ENST00000498466 RBM12Q9NTZ6 932 aaKnown RBP15.28■□□□□ 0.04
CCDC58-207ENST00000498466 CEP72Q9P209 647 aa15.28■□□□□ 0.04
CCDC58-207ENST00000498466 TNFSF13BQ9Y275 285 aa15.28■□□□□ 0.04
CCDC58-207ENST00000498466 NCANO14594 1321 aa15.27■□□□□ 0.04
CCDC58-207ENST00000498466 SLC38A8A6NNN8 435 aa15.27■□□□□ 0.04
CCDC58-207ENST00000498466 K7ERI5 159 aa15.27■□□□□ 0.04
CCDC58-207ENST00000498466 FOXD2O60548 495 aaPredicted RBP15.27■□□□□ 0.04
CCDC58-207ENST00000498466 RPA1P27694 616 aa15.27■□□□□ 0.04
CCDC58-207ENST00000498466 TRIM29Q14134 588 aa15.27■□□□□ 0.04
CCDC58-207ENST00000498466 MRPL58Q14197 206 aaKnown RBP15.27■□□□□ 0.04
CCDC58-207ENST00000498466 TEAD2Q15562 447 aa15.27■□□□□ 0.04
CCDC58-207ENST00000498466 ZNF568Q3ZCX4 644 aa15.27■□□□□ 0.04
CCDC58-207ENST00000498466 XKR4Q5GH76 650 aa15.27■□□□□ 0.04
CCDC58-207ENST00000498466 IL31Q6EBC2 164 aa15.27■□□□□ 0.04
CCDC58-207ENST00000498466 ZNF280DQ6N043 979 aa15.27■□□□□ 0.04
CCDC58-207ENST00000498466 C1orf228Q6PIY5 440 aa15.27■□□□□ 0.04
CCDC58-207ENST00000498466 ALKAL1Q6UXT8 129 aa15.27■□□□□ 0.04
CCDC58-207ENST00000498466 CEP68Q76N32 757 aa15.27■□□□□ 0.04
CCDC58-207ENST00000498466 KIFAP3Q92845 792 aa15.27■□□□□ 0.04
CCDC58-207ENST00000498466 ZMAT2Q96NC0 199 aaKnown RBP15.27■□□□□ 0.04
CCDC58-207ENST00000498466 CDT1Q9H211 546 aa15.27■□□□□ 0.04
CCDC58-207ENST00000498466 AFF4Q9UHB7 1163 aaKnown RBP15.27■□□□□ 0.04
CCDC58-207ENST00000498466 COL4A2P08572 1712 aa15.26■□□□□ 0.03
CCDC58-207ENST00000498466 K7ESF4 209 aa15.26■□□□□ 0.03
CCDC58-207ENST00000498466 ARNTLO00327 626 aa15.26■□□□□ 0.03
CCDC58-207ENST00000498466 CPB1P15086 417 aa15.26■□□□□ 0.03
CCDC58-207ENST00000498466 RPL9P32969 192 aaKnown RBP15.26■□□□□ 0.03
CCDC58-207ENST00000498466 MCM4P33991 863 aa15.26■□□□□ 0.03
CCDC58-207ENST00000498466 SOX9P48436 509 aa15.26■□□□□ 0.03
CCDC58-207ENST00000498466 MLLT6P55198 1093 aaPredicted RBP15.26■□□□□ 0.03
CCDC58-207ENST00000498466 AASDHQ4L235 1098 aaPredicted RBP15.26■□□□□ 0.03
CCDC58-207ENST00000498466 Q6ZS52 159 aa15.26■□□□□ 0.03
CCDC58-207ENST00000498466 FAM160A2Q8N612 972 aaPredicted RBP15.26■□□□□ 0.03
CCDC58-207ENST00000498466 NECAB1Q8N987 351 aa15.26■□□□□ 0.03
CCDC58-207ENST00000498466 APPL2Q8NEU8 664 aa15.26■□□□□ 0.03
CCDC58-207ENST00000498466 FAM200AQ8TCP9 573 aa15.26■□□□□ 0.03
CCDC58-207ENST00000498466 E2F7Q96AV8 911 aa15.26■□□□□ 0.03
CCDC58-207ENST00000498466 GPR88Q9GZN0 384 aa15.26■□□□□ 0.03
CCDC58-207ENST00000498466 C8orf33Q9H7E9 229 aaPredicted RBP15.26■□□□□ 0.03
CCDC58-207ENST00000498466 ANGPTL2Q9UKU9 493 aa15.26■□□□□ 0.03
CCDC58-207ENST00000498466 MAFFQ9ULX9 164 aa15.26■□□□□ 0.03
CCDC58-207ENST00000498466 TICRRQ7Z2Z1 1910 aa15.25■□□□□ 0.03
CCDC58-207ENST00000498466 CHD8Q9HCK8 2581 aa15.25■□□□□ 0.03
CCDC58-207ENST00000498466 CCDC169A6NNP5 214 aa15.25■□□□□ 0.03
CCDC58-207ENST00000498466 CHADO15335 359 aa15.25■□□□□ 0.03
CCDC58-207ENST00000498466 PAPSS2O95340 614 aaPredicted RBP15.25■□□□□ 0.03
CCDC58-207ENST00000498466 KCNE1P15382 129 aa15.25■□□□□ 0.03
CCDC58-207ENST00000498466 EPHA5P54756 1037 aa15.25■□□□□ 0.03
CCDC58-207ENST00000498466 RNF19BQ6ZMZ0 732 aa15.25■□□□□ 0.03
CCDC58-207ENST00000498466 SHKBP1Q8TBC3 707 aa15.25■□□□□ 0.03
CCDC58-207ENST00000498466 DDX12PQ92771 950 aa15.25■□□□□ 0.03
CCDC58-207ENST00000498466 C18orf25Q96B23 403 aaPredicted RBP15.25■□□□□ 0.03
CCDC58-207ENST00000498466 SUSD3Q96L08 255 aa15.25■□□□□ 0.03
CCDC58-207ENST00000498466 ACAP3Q96P50 834 aa15.25■□□□□ 0.03
CCDC58-207ENST00000498466 ACO2Q99798 780 aaKnown RBP15.25■□□□□ 0.03
CCDC58-207ENST00000498466 TCHPQ9BT92 498 aa15.25■□□□□ 0.03
CCDC58-207ENST00000498466 MRPL4Q9BYD3 311 aaKnown RBP15.25■□□□□ 0.03
CCDC58-207ENST00000498466 BHMT2Q9H2M3 363 aa15.25■□□□□ 0.03
CCDC58-207ENST00000498466 MAP1BP46821 2468 aaKnown RBP15.24■□□□□ 0.03
CCDC58-207ENST00000498466 PHLPP2Q6ZVD8 1323 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms