RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 RANBP2P49792 3224 aaKnown RBP14.62□□□□□ -0.07
CPNE1-227ENST00000498056 BCAR1P56945 870 aa14.62□□□□□ -0.07
CPNE1-227ENST00000498056 CETN1Q12798 172 aa14.62□□□□□ -0.07
CPNE1-227ENST00000498056 MYO9BQ13459 2157 aa14.62□□□□□ -0.07
CPNE1-227ENST00000498056 RAB30Q15771 203 aa14.62□□□□□ -0.07
CPNE1-227ENST00000498056 PRPF38BQ5VTL8 546 aaKnown RBP14.62□□□□□ -0.07
CPNE1-227ENST00000498056 C15orf39Q6ZRI6 1047 aa14.62□□□□□ -0.07
CPNE1-227ENST00000498056 APTXQ7Z2E3 356 aaKnown RBP14.62□□□□□ -0.07
CPNE1-227ENST00000498056 COLGALT1Q8NBJ5 622 aa14.62□□□□□ -0.07
CPNE1-227ENST00000498056 FBXL13Q8NEE6 735 aa14.62□□□□□ -0.07
CPNE1-227ENST00000498056 TMEM175Q9BSA9 504 aa14.62□□□□□ -0.07
CPNE1-227ENST00000498056 PBX4Q9BYU1 374 aa14.62□□□□□ -0.07
CPNE1-227ENST00000498056 PRO3102Q9H379 93 aa14.62□□□□□ -0.07
CPNE1-227ENST00000498056 IFNKQ9P0W0 207 aa14.62□□□□□ -0.07
CPNE1-227ENST00000498056 MSRAQ9UJ68 235 aa14.62□□□□□ -0.07
CPNE1-227ENST00000498056 MTUS1Q9ULD2 1270 aa14.62□□□□□ -0.07
CPNE1-227ENST00000498056 YBX2Q9Y2T7 364 aaKnown RBP14.62□□□□□ -0.07
CPNE1-227ENST00000498056 NUB1Q9Y5A7 615 aa14.62□□□□□ -0.07
CPNE1-227ENST00000498056 LAMA2P24043 3122 aaKnown RBP14.62□□□□□ -0.07
CPNE1-227ENST00000498056 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.61□□□□□ -0.07
CPNE1-227ENST00000498056 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.61□□□□□ -0.07
CPNE1-227ENST00000498056 LINC01553A4QN01 128 aa14.61□□□□□ -0.07
CPNE1-227ENST00000498056 NT5C1B-RDH14C9J2C7 533 aa14.61□□□□□ -0.07
CPNE1-227ENST00000498056 NRP1O14786 923 aa14.61□□□□□ -0.07
CPNE1-227ENST00000498056 B3GAT3O94766 335 aa14.61□□□□□ -0.07
CPNE1-227ENST00000498056 VNN1O95497 513 aa14.61□□□□□ -0.07
CPNE1-227ENST00000498056 RPL9P32969 192 aaKnown RBP14.61□□□□□ -0.07
CPNE1-227ENST00000498056 ALDH7A1P49419 539 aaKnown RBP14.61□□□□□ -0.07
CPNE1-227ENST00000498056 TAF6P49848 677 aa14.61□□□□□ -0.07
CPNE1-227ENST00000498056 MYL6P60660 151 aa14.61□□□□□ -0.07
CPNE1-227ENST00000498056 NOP14P78316 857 aaKnown RBP14.61□□□□□ -0.07
CPNE1-227ENST00000498056 RBP5P82980 135 aa14.61□□□□□ -0.07
CPNE1-227ENST00000498056 UPP1Q16831 310 aa14.61□□□□□ -0.07
CPNE1-227ENST00000498056 SV2CQ496J9 727 aa14.61□□□□□ -0.07
CPNE1-227ENST00000498056 PPP2R2DQ66LE6 453 aa14.61□□□□□ -0.07
CPNE1-227ENST00000498056 SCARA3Q6AZY7 606 aa14.61□□□□□ -0.07
CPNE1-227ENST00000498056 SCARA5Q6ZMJ2 495 aa14.61□□□□□ -0.07
CPNE1-227ENST00000498056 CCDC150Q8NCX0 1101 aa14.61□□□□□ -0.07
CPNE1-227ENST00000498056 C3orf58Q8NDZ4 430 aa14.61□□□□□ -0.07
CPNE1-227ENST00000498056 ELMO3Q96BJ8 720 aa14.61□□□□□ -0.07
CPNE1-227ENST00000498056 DDX27Q96GQ7 796 aaKnown RBP14.61□□□□□ -0.07
CPNE1-227ENST00000498056 PCMTD1Q96MG8 357 aaPredicted RBP14.61□□□□□ -0.07
CPNE1-227ENST00000498056 CRACR2AQ9BSW2 395 aa14.61□□□□□ -0.07
CPNE1-227ENST00000498056 PI4K2AQ9BTU6 479 aa14.61□□□□□ -0.07
CPNE1-227ENST00000498056 NKX2-4Q9H2Z4 354 aa14.61□□□□□ -0.07
CPNE1-227ENST00000498056 AAASQ9NRG9 546 aa14.61□□□□□ -0.07
CPNE1-227ENST00000498056 COLQQ9Y215 455 aaPredicted RBP14.61□□□□□ -0.07
CPNE1-227ENST00000498056 FAN1Q9Y2M0 1017 aa14.61□□□□□ -0.07
CPNE1-227ENST00000498056 PLXNA3P51805 1871 aa14.61□□□□□ -0.07
CPNE1-227ENST00000498056 ANO9A1A5B4 782 aa14.6□□□□□ -0.07
CPNE1-227ENST00000498056 GOLGA6L3A6NEY3 463 aa14.6□□□□□ -0.07
CPNE1-227ENST00000498056 P4HA2O15460 535 aa14.6□□□□□ -0.07
CPNE1-227ENST00000498056 ARHGEF15O94989 841 aa14.6□□□□□ -0.07
CPNE1-227ENST00000498056 ITGB1P05556 798 aa14.6□□□□□ -0.07
CPNE1-227ENST00000498056 TPM3P06753 285 aa14.6□□□□□ -0.07
CPNE1-227ENST00000498056 GALTP07902 379 aa14.6□□□□□ -0.07
CPNE1-227ENST00000498056 PNPLA4P41247 253 aa14.6□□□□□ -0.07
CPNE1-227ENST00000498056 UBASH3AP57075 661 aa14.6□□□□□ -0.07
CPNE1-227ENST00000498056 TNNC1P63316 161 aa14.6□□□□□ -0.07
CPNE1-227ENST00000498056 UBXN1Q04323 297 aa14.6□□□□□ -0.07
CPNE1-227ENST00000498056 MYO1EQ12965 1108 aa14.6□□□□□ -0.07
CPNE1-227ENST00000498056 PTPN21Q16825 1174 aa14.6□□□□□ -0.07
CPNE1-227ENST00000498056 EPC2Q52LR7 807 aa14.6□□□□□ -0.07
CPNE1-227ENST00000498056 SPOPLQ6IQ16 392 aa14.6□□□□□ -0.07
CPNE1-227ENST00000498056 KCNT2Q6UVM3 1135 aa14.6□□□□□ -0.07
CPNE1-227ENST00000498056 GBP6Q6ZN66 633 aa14.6□□□□□ -0.07
CPNE1-227ENST00000498056 TMEM173Q86WV6 379 aaPredicted RBP14.6□□□□□ -0.07
CPNE1-227ENST00000498056 LRRC52Q8N7C0 313 aa14.6□□□□□ -0.07
CPNE1-227ENST00000498056 SEMA4DQ92854 862 aa14.6□□□□□ -0.07
CPNE1-227ENST00000498056 HPDLQ96IR7 371 aa14.6□□□□□ -0.07
CPNE1-227ENST00000498056 INTS2Q9H0H0 1204 aaKnown RBP14.6□□□□□ -0.07
CPNE1-227ENST00000498056 MARCH5Q9NX47 278 aa14.6□□□□□ -0.07
CPNE1-227ENST00000498056 RAB20Q9NX57 234 aa14.6□□□□□ -0.07
CPNE1-227ENST00000498056 PCDHB12Q9Y5F1 795 aa14.6□□□□□ -0.07
CPNE1-227ENST00000498056 PTPRDP23468 1912 aa14.6□□□□□ -0.07
CPNE1-227ENST00000498056 A0A1B0GTH6 734 aa14.59□□□□□ -0.07
CPNE1-227ENST00000498056 TMEM189-UBE2V1I3L0A0 370 aa14.59□□□□□ -0.07
CPNE1-227ENST00000498056 I3L4J1 428 aa14.59□□□□□ -0.07
CPNE1-227ENST00000498056 PIRO00625 290 aa14.59□□□□□ -0.07
CPNE1-227ENST00000498056 CBFA2T2O43439 604 aa14.59□□□□□ -0.07
CPNE1-227ENST00000498056 LRRN2O75325 713 aa14.59□□□□□ -0.07
CPNE1-227ENST00000498056 CSPG5O95196 566 aa14.59□□□□□ -0.07
CPNE1-227ENST00000498056 DNAJB2P25686 324 aa14.59□□□□□ -0.07
CPNE1-227ENST00000498056 PPM1AP35813 382 aa14.59□□□□□ -0.07
CPNE1-227ENST00000498056 BRCC3P46736 316 aa14.59□□□□□ -0.07
CPNE1-227ENST00000498056 LRMPQ12912 555 aa14.59□□□□□ -0.07
CPNE1-227ENST00000498056 EXOC3L4Q17RC7 722 aa14.59□□□□□ -0.07
CPNE1-227ENST00000498056 ZNF667Q5HYK9 610 aa14.59□□□□□ -0.07
CPNE1-227ENST00000498056 SPRED2Q7Z698 418 aa14.59□□□□□ -0.07
CPNE1-227ENST00000498056 SLC39A11Q8N1S5 342 aa14.59□□□□□ -0.07
CPNE1-227ENST00000498056 CXorf38Q8TB03 319 aa14.59□□□□□ -0.07
CPNE1-227ENST00000498056 BCL7CQ8WUZ0 217 aaPredicted RBP14.59□□□□□ -0.07
CPNE1-227ENST00000498056 TMEM169Q96HH4 297 aa14.59□□□□□ -0.07
CPNE1-227ENST00000498056 C17orf80Q9BSJ5 609 aa14.59□□□□□ -0.07
CPNE1-227ENST00000498056 COLEC11Q9BWP8 271 aa14.59□□□□□ -0.07
CPNE1-227ENST00000498056 LSM14BQ9BX40 385 aaKnown RBP14.59□□□□□ -0.07
CPNE1-227ENST00000498056 XPO4Q9C0E2 1151 aaKnown RBP14.59□□□□□ -0.07
CPNE1-227ENST00000498056 NXF1Q9UBU9 619 aaKnown RBP14.59□□□□□ -0.07
CPNE1-227ENST00000498056 ADAM28Q9UKQ2 775 aa14.59□□□□□ -0.07
CPNE1-227ENST00000498056 RWDD3Q9Y3V2 267 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms