RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 ARPP19P56211 112 aa18.15■□□□□ 0.5
VIM-208ENST00000497849 DGKKQ5KSL6 1271 aa18.15■□□□□ 0.5
VIM-208ENST00000497849 PLA2G2CQ5R387 149 aa18.15■□□□□ 0.5
VIM-208ENST00000497849 C1orf228Q6PIY5 440 aa18.15■□□□□ 0.5
VIM-208ENST00000497849 MAEAQ7L5Y9 396 aa18.15■□□□□ 0.5
VIM-208ENST00000497849 FAM177A1Q8N128 213 aaPredicted RBP18.15■□□□□ 0.5
VIM-208ENST00000497849 KDF1Q8NAX2 398 aaPredicted RBP18.15■□□□□ 0.5
VIM-208ENST00000497849 CSGALNACT1Q8TDX6 532 aa18.15■□□□□ 0.5
VIM-208ENST00000497849 TMEM121BQ9BXQ6 578 aaPredicted RBP18.15■□□□□ 0.5
VIM-208ENST00000497849 SMOC1Q9H4F8 434 aa18.15■□□□□ 0.5
VIM-208ENST00000497849 AKAP13Q12802 2813 aa18.15■□□□□ 0.5
VIM-208ENST00000497849 KIF26AQ9ULI4 1882 aaPredicted RBP18.14■□□□□ 0.49
VIM-208ENST00000497849 MYBPHLA2RUH7 354 aa18.14■□□□□ 0.49
VIM-208ENST00000497849 USO1O60763 962 aaKnown RBP18.14■□□□□ 0.49
VIM-208ENST00000497849 SOX4Q06945 474 aaPredicted RBP18.14■□□□□ 0.49
VIM-208ENST00000497849 PRPF4BQ13523 1007 aaKnown RBP18.14■□□□□ 0.49
VIM-208ENST00000497849 TEAD2Q15562 447 aa18.14■□□□□ 0.49
VIM-208ENST00000497849 PSAPL1Q6NUJ1 521 aa18.14■□□□□ 0.49
VIM-208ENST00000497849 KBTBD6Q86V97 674 aa18.14■□□□□ 0.49
VIM-208ENST00000497849 PIGOQ8TEQ8 1089 aa18.14■□□□□ 0.49
VIM-208ENST00000497849 GAB3Q8WWW8 586 aa18.14■□□□□ 0.49
VIM-208ENST00000497849 UROC1Q96N76 676 aa18.14■□□□□ 0.49
VIM-208ENST00000497849 C8orf33Q9H7E9 229 aaPredicted RBP18.14■□□□□ 0.49
VIM-208ENST00000497849 WASF3Q9UPY6 502 aa18.14■□□□□ 0.49
VIM-208ENST00000497849 SPECC1L-ADORA2AF8WAN1 911 aa18.13■□□□□ 0.49
VIM-208ENST00000497849 CHADO15335 359 aa18.13■□□□□ 0.49
VIM-208ENST00000497849 MYL4P12829 197 aa18.13■□□□□ 0.49
VIM-208ENST00000497849 CTHP32929 405 aa18.13■□□□□ 0.49
VIM-208ENST00000497849 KPNA1P52294 538 aaPredicted RBP18.13■□□□□ 0.49
VIM-208ENST00000497849 FCHO2Q0JRZ9 810 aa18.13■□□□□ 0.49
VIM-208ENST00000497849 CCINQ13939 588 aa18.13■□□□□ 0.49
VIM-208ENST00000497849 MRPL58Q14197 206 aaKnown RBP18.13■□□□□ 0.49
VIM-208ENST00000497849 BMP2KLQ5H9B9 411 aa18.13■□□□□ 0.49
VIM-208ENST00000497849 EARS2Q5JPH6 523 aaKnown RBP18.13■□□□□ 0.49
VIM-208ENST00000497849 IQCEQ6IPM2 695 aa18.13■□□□□ 0.49
VIM-208ENST00000497849 PIK3AP1Q6ZUJ8 805 aa18.13■□□□□ 0.49
VIM-208ENST00000497849 CACNA2D4Q7Z3S7 1137 aa18.13■□□□□ 0.49
VIM-208ENST00000497849 ZBTB8OSQ8IWT0 167 aa18.13■□□□□ 0.49
VIM-208ENST00000497849 SLFN12Q8IYM2 578 aa18.13■□□□□ 0.49
VIM-208ENST00000497849 BSNDQ8WZ55 320 aa18.13■□□□□ 0.49
VIM-208ENST00000497849 ZNF512Q96ME7 567 aaPredicted RBP18.13■□□□□ 0.49
VIM-208ENST00000497849 ADPGKQ9BRR6 497 aa18.13■□□□□ 0.49
VIM-208ENST00000497849 CCDC113Q9H0I3 377 aa18.13■□□□□ 0.49
VIM-208ENST00000497849 FBXL5Q9UKA1 691 aa18.13■□□□□ 0.49
VIM-208ENST00000497849 ACKR2O00590 384 aa18.12■□□□□ 0.49
VIM-208ENST00000497849 EXTL3O43909 919 aa18.12■□□□□ 0.49
VIM-208ENST00000497849 RPP40O75818 363 aaKnown RBP18.12■□□□□ 0.49
VIM-208ENST00000497849 HSPA4P34932 840 aa18.12■□□□□ 0.49
VIM-208ENST00000497849 PXNP49023 591 aaPredicted RBP18.12■□□□□ 0.49
VIM-208ENST00000497849 TWF1Q12792 350 aa18.12■□□□□ 0.49
VIM-208ENST00000497849 TOB2Q14106 344 aaPredicted RBP18.12■□□□□ 0.49
VIM-208ENST00000497849 TMEM132AQ24JP5 1023 aa18.12■□□□□ 0.49
VIM-208ENST00000497849 TPGS2Q68CL5 300 aa18.12■□□□□ 0.49
VIM-208ENST00000497849 TTC8Q8TAM2 541 aa18.12■□□□□ 0.49
VIM-208ENST00000497849 SHKBP1Q8TBC3 707 aa18.12■□□□□ 0.49
VIM-208ENST00000497849 OXER1Q8TDS5 423 aa18.12■□□□□ 0.49
VIM-208ENST00000497849 E2F7Q96AV8 911 aa18.12■□□□□ 0.49
VIM-208ENST00000497849 CCDC43Q96MW1 224 aaKnown RBP18.12■□□□□ 0.49
VIM-208ENST00000497849 LRRC3BQ96PB8 259 aa18.12■□□□□ 0.49
VIM-208ENST00000497849 SMIM28A0A1B0GU29 152 aa18.11■□□□□ 0.49
VIM-208ENST00000497849 FAM205CA6NFA0 338 aa18.11■□□□□ 0.49
VIM-208ENST00000497849 GIPC1O14908 333 aa18.11■□□□□ 0.49
VIM-208ENST00000497849 BAG4O95429 457 aaKnown RBP18.11■□□□□ 0.49
VIM-208ENST00000497849 PON2Q15165 354 aa18.11■□□□□ 0.49
VIM-208ENST00000497849 MAPK6Q16659 721 aa18.11■□□□□ 0.49
VIM-208ENST00000497849 TCEAL6Q6IPX3 200 aa18.11■□□□□ 0.49
VIM-208ENST00000497849 PKN3Q6P5Z2 889 aa18.11■□□□□ 0.49
VIM-208ENST00000497849 RALGPS2Q86X27 583 aaPredicted RBP18.11■□□□□ 0.49
VIM-208ENST00000497849 GPIHBP1Q8IV16 184 aa18.11■□□□□ 0.49
VIM-208ENST00000497849 YAF2Q8IY57 180 aa18.11■□□□□ 0.49
VIM-208ENST00000497849 ELMOD1Q8N336 334 aa18.11■□□□□ 0.49
VIM-208ENST00000497849 LEMD2Q8NC56 503 aa18.11■□□□□ 0.49
VIM-208ENST00000497849 TCEAL3Q969E4 200 aa18.11■□□□□ 0.49
VIM-208ENST00000497849 NAP1L4Q99733 375 aaKnown RBP18.11■□□□□ 0.49
VIM-208ENST00000497849 LRRC3Q9BY71 257 aa18.11■□□□□ 0.49
VIM-208ENST00000497849 GPR88Q9GZN0 384 aa18.11■□□□□ 0.49
VIM-208ENST00000497849 C2orf40Q9H1Z8 148 aa18.11■□□□□ 0.49
VIM-208ENST00000497849 ASAH2Q9NR71 780 aa18.11■□□□□ 0.49
VIM-208ENST00000497849 GJB4Q9NTQ9 266 aa18.11■□□□□ 0.49
VIM-208ENST00000497849 GTSE1Q9NYZ3 720 aa18.11■□□□□ 0.49
VIM-208ENST00000497849 PCDHGA5Q9Y5G8 931 aa18.11■□□□□ 0.49
VIM-208ENST00000497849 ATG2BQ96BY7 2078 aa18.11■□□□□ 0.49
VIM-208ENST00000497849 DSPP15924 2871 aaKnown RBP18.1■□□□□ 0.49
VIM-208ENST00000497849 CPLX1O14810 134 aa18.1■□□□□ 0.49
VIM-208ENST00000497849 SYN3O14994 580 aa18.1■□□□□ 0.49
VIM-208ENST00000497849 XRCC6P12956 609 aaKnown RBP eCLIP18.1■□□□□ 0.49
VIM-208ENST00000497849 LIG1P18858 919 aa18.1■□□□□ 0.49
VIM-208ENST00000497849 SPINK2P20155 84 aa18.1■□□□□ 0.49
VIM-208ENST00000497849 MPLP40238 635 aa18.1■□□□□ 0.49
VIM-208ENST00000497849 NOVA1P51513 510 aaKnown RBP18.1■□□□□ 0.49
VIM-208ENST00000497849 DCAF4L1Q3SXM0 396 aa18.1■□□□□ 0.49
VIM-208ENST00000497849 RNF43Q68DV7 783 aa18.1■□□□□ 0.49
VIM-208ENST00000497849 SYNPOQ8N3V7 929 aa18.1■□□□□ 0.49
VIM-208ENST00000497849 ZFYVE19Q96K21 471 aa18.1■□□□□ 0.49
VIM-208ENST00000497849 SLITRK6Q9H5Y7 841 aa18.1■□□□□ 0.49
VIM-208ENST00000497849 AFF4Q9UHB7 1163 aaKnown RBP18.1■□□□□ 0.49
VIM-208ENST00000497849 PCDHA12Q9UN75 941 aa18.1■□□□□ 0.49
VIM-208ENST00000497849 NUP210Q8TEM1 1887 aaPredicted RBP18.09■□□□□ 0.49
VIM-208ENST00000497849 DMXL2Q8TDJ6 3036 aa18.09■□□□□ 0.49
VIM-208ENST00000497849 CCDC163A0A0D9SF12 145 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms