RNA–Protein interactions for RNA: ENST00000497791.5

UMPS-209, Transcript of uridine monophosphate synthetase, human

TSL 1 (best)

Gene UMPS, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UMPS-209	ENST00000497791	TNNC2	P02585	160 aa		16.03	■□□□□ 0.16
UMPS-209	ENST00000497791	KRT19	P08727	400 aa		16.03	■□□□□ 0.16
UMPS-209	ENST00000497791	CYP3A5	P20815	502 aa		16.03	■□□□□ 0.16
UMPS-209	ENST00000497791	MXI1	P50539	228 aa		16.03	■□□□□ 0.16
UMPS-209	ENST00000497791	ENPEP	Q07075	957 aa		16.03	■□□□□ 0.16
UMPS-209	ENST00000497791	BIRC3	Q13489	604 aa		16.03	■□□□□ 0.16
UMPS-209	ENST00000497791	HSP90AA2P	Q14568	343 aa	Predicted RBP	16.03	■□□□□ 0.16
UMPS-209	ENST00000497791	PTPN21	Q16825	1174 aa		16.03	■□□□□ 0.16
UMPS-209	ENST00000497791	KCNT2	Q6UVM3	1135 aa		16.03	■□□□□ 0.16
UMPS-209	ENST00000497791	CACTIN	Q8WUQ7	758 aa	Known RBP	16.03	■□□□□ 0.16
UMPS-209	ENST00000497791	PI4K2A	Q9BTU6	479 aa		16.03	■□□□□ 0.16
UMPS-209	ENST00000497791	CERS4	Q9HA82	394 aa		16.03	■□□□□ 0.16
UMPS-209	ENST00000497791	TMEM8A	Q9HCN3	771 aa		16.03	■□□□□ 0.16
UMPS-209	ENST00000497791	AGAP1	Q9UPQ3	857 aa		16.03	■□□□□ 0.16
UMPS-209	ENST00000497791	TSC2	P49815	1807 aa		16.03	■□□□□ 0.16
UMPS-209	ENST00000497791		I3L4J1	428 aa		16.02	■□□□□ 0.16
UMPS-209	ENST00000497791	PIR	O00625	290 aa		16.02	■□□□□ 0.16
UMPS-209	ENST00000497791	HLA-DRA	P01903	254 aa		16.02	■□□□□ 0.16
UMPS-209	ENST00000497791	CDK11B	P21127	795 aa	Known RBP	16.02	■□□□□ 0.16
UMPS-209	ENST00000497791	DNAJB2	P25686	324 aa		16.02	■□□□□ 0.16
UMPS-209	ENST00000497791	COPB1	P53618	953 aa	Known RBP	16.02	■□□□□ 0.16
UMPS-209	ENST00000497791	MYL6	P60660	151 aa		16.02	■□□□□ 0.16
UMPS-209	ENST00000497791	MAN2A1	Q16706	1144 aa		16.02	■□□□□ 0.16
UMPS-209	ENST00000497791	VN1R3	Q9BXE9	311 aa		16.02	■□□□□ 0.16
UMPS-209	ENST00000497791	ITGA11	Q9UKX5	1188 aa		16.02	■□□□□ 0.16
UMPS-209	ENST00000497791	EYS	Q5T1H1	3165 aa		16.02	■□□□□ 0.15
UMPS-209	ENST00000497791	GOLGA6L19	H0YKK7	550 aa		16.02	■□□□□ 0.15
UMPS-209	ENST00000497791	AP5Z1	O43299	807 aa		16.02	■□□□□ 0.15
UMPS-209	ENST00000497791	AFP	P02771	609 aa	Known RBP	16.02	■□□□□ 0.15
UMPS-209	ENST00000497791	APBA1	Q02410	837 aa		16.02	■□□□□ 0.15
UMPS-209	ENST00000497791	NCOA4	Q13772	614 aa		16.02	■□□□□ 0.15
UMPS-209	ENST00000497791	VWA3B	Q502W6	1294 aa		16.02	■□□□□ 0.15
UMPS-209	ENST00000497791	KRT39	Q6A163	491 aa		16.02	■□□□□ 0.15
UMPS-209	ENST00000497791	SPOPL	Q6IQ16	392 aa		16.02	■□□□□ 0.15
UMPS-209	ENST00000497791	SLC39A11	Q8N1S5	342 aa		16.02	■□□□□ 0.15
UMPS-209	ENST00000497791	ZNF558	Q96NG5	402 aa		16.02	■□□□□ 0.15
UMPS-209	ENST00000497791	NAP1L5	Q96NT1	182 aa	Predicted RBP	16.02	■□□□□ 0.15
UMPS-209	ENST00000497791	TSPAN18	Q96SJ8	248 aa		16.02	■□□□□ 0.15
UMPS-209	ENST00000497791	CRACR2A	Q9BSW2	395 aa		16.02	■□□□□ 0.15
UMPS-209	ENST00000497791	XYLT2	Q9H1B5	865 aa		16.02	■□□□□ 0.15
UMPS-209	ENST00000497791	NDST4	Q9H3R1	872 aa		16.02	■□□□□ 0.15
UMPS-209	ENST00000497791	MSRA	Q9UJ68	235 aa		16.02	■□□□□ 0.15
UMPS-209	ENST00000497791	FAN1	Q9Y2M0	1017 aa		16.02	■□□□□ 0.15
UMPS-209	ENST00000497791	COL4A4	P53420	1690 aa	Predicted RBP	16.01	■□□□□ 0.15
UMPS-209	ENST00000497791	EPOP	A6NHQ4	379 aa		16.01	■□□□□ 0.15
UMPS-209	ENST00000497791	LRRC10B	A6NIK2	292 aa		16.01	■□□□□ 0.15
UMPS-209	ENST00000497791	XPOT	O43592	962 aa	Known RBP	16.01	■□□□□ 0.15
UMPS-209	ENST00000497791	PHACTR2	O75167	634 aa		16.01	■□□□□ 0.15
UMPS-209	ENST00000497791	B3GAT3	O94766	335 aa		16.01	■□□□□ 0.15
UMPS-209	ENST00000497791	ALDH2	P05091	517 aa		16.01	■□□□□ 0.15
UMPS-209	ENST00000497791	GTF2H1	P32780	548 aa		16.01	■□□□□ 0.15
UMPS-209	ENST00000497791	CTNNB1	P35222	781 aa		16.01	■□□□□ 0.15
UMPS-209	ENST00000497791	BRCC3	P46736	316 aa		16.01	■□□□□ 0.15
UMPS-209	ENST00000497791	SMAD3	P84022	425 aa	Known RBP	16.01	■□□□□ 0.15
UMPS-209	ENST00000497791	MYL7	Q01449	175 aa		16.01	■□□□□ 0.15
UMPS-209	ENST00000497791	LRIT3	Q3SXY7	679 aa		16.01	■□□□□ 0.15
UMPS-209	ENST00000497791	USP37	Q86T82	979 aa		16.01	■□□□□ 0.15
UMPS-209	ENST00000497791	RSPH1	Q8WYR4	309 aa		16.01	■□□□□ 0.15
UMPS-209	ENST00000497791	TMEM175	Q9BSA9	504 aa		16.01	■□□□□ 0.15
UMPS-209	ENST00000497791		A0A1W2PPC1	479 aa		16	■□□□□ 0.15
UMPS-209	ENST00000497791	PES1	O00541	588 aa	Known RBP	16	■□□□□ 0.15
UMPS-209	ENST00000497791	TEX33	O43247	280 aa		16	■□□□□ 0.15
UMPS-209	ENST00000497791	LAG3	P18627	525 aa		16	■□□□□ 0.15
UMPS-209	ENST00000497791	RPL9	P32969	192 aa	Known RBP	16	■□□□□ 0.15
UMPS-209	ENST00000497791	PIK3CA	P42336	1068 aa		16	■□□□□ 0.15
UMPS-209	ENST00000497791	ALDH7A1	P49419	539 aa	Known RBP	16	■□□□□ 0.15
UMPS-209	ENST00000497791	LILRA4	P59901	499 aa		16	■□□□□ 0.15
UMPS-209	ENST00000497791	FANCC	Q00597	558 aa		16	■□□□□ 0.15
UMPS-209	ENST00000497791	RAB30	Q15771	203 aa		16	■□□□□ 0.15
UMPS-209	ENST00000497791	EPC2	Q52LR7	807 aa		16	■□□□□ 0.15
UMPS-209	ENST00000497791	PPP2R2D	Q66LE6	453 aa		16	■□□□□ 0.15
UMPS-209	ENST00000497791	TAS1R1	Q7RTX1	841 aa		16	■□□□□ 0.15
UMPS-209	ENST00000497791	KLHL23	Q8NBE8	558 aa		16	■□□□□ 0.15
UMPS-209	ENST00000497791	TIFA	Q96CG3	184 aa		16	■□□□□ 0.15
UMPS-209	ENST00000497791	IGSF21	Q96ID5	467 aa		16	■□□□□ 0.15
UMPS-209	ENST00000497791	B3GALT6	Q96L58	329 aa		16	■□□□□ 0.15
UMPS-209	ENST00000497791	UROC1	Q96N76	676 aa		16	■□□□□ 0.15
UMPS-209	ENST00000497791	GPR62	Q9BZJ7	368 aa		16	■□□□□ 0.15
UMPS-209	ENST00000497791	APOBEC3G	Q9HC16	384 aa	Known RBP	16	■□□□□ 0.15
UMPS-209	ENST00000497791	BMPR1A	P36894	532 aa		15.99	■□□□□ 0.15
UMPS-209	ENST00000497791	KLK7	P49862	253 aa		15.99	■□□□□ 0.15
UMPS-209	ENST00000497791	AP3M2	P53677	418 aa		15.99	■□□□□ 0.15
UMPS-209	ENST00000497791	RBP5	P82980	135 aa		15.99	■□□□□ 0.15
UMPS-209	ENST00000497791	TIGD5	Q53EQ6	642 aa		15.99	■□□□□ 0.15
UMPS-209	ENST00000497791	DCLRE1A	Q6PJP8	1040 aa		15.99	■□□□□ 0.15
UMPS-209	ENST00000497791	LMO3	Q8TAP4	145 aa		15.99	■□□□□ 0.15
UMPS-209	ENST00000497791	LRCH3	Q96II8	777 aa		15.99	■□□□□ 0.15
UMPS-209	ENST00000497791	HPDL	Q96IR7	371 aa		15.99	■□□□□ 0.15
UMPS-209	ENST00000497791	POLI	Q9UNA4	740 aa		15.99	■□□□□ 0.15
UMPS-209	ENST00000497791	COQ4	Q9Y3A0	265 aa		15.99	■□□□□ 0.15
UMPS-209	ENST00000497791	PRRC2B	Q5JSZ5	2229 aa	Known RBP	15.99	■□□□□ 0.15
UMPS-209	ENST00000497791	STX10	O60499	249 aa		15.99	■□□□□ 0.15
UMPS-209	ENST00000497791	CSPG5	O95196	566 aa		15.99	■□□□□ 0.15
UMPS-209	ENST00000497791	EFEMP2	O95967	443 aa		15.99	■□□□□ 0.15
UMPS-209	ENST00000497791	DNAJB1	P25685	340 aa		15.99	■□□□□ 0.15
UMPS-209	ENST00000497791	ERVK-21	P61565	698 aa		15.99	■□□□□ 0.15
UMPS-209	ENST00000497791	LRMP	Q12912	555 aa		15.99	■□□□□ 0.15
UMPS-209	ENST00000497791	TRPC3	Q13507	836 aa		15.99	■□□□□ 0.15
UMPS-209	ENST00000497791	FBXL13	Q8NEE6	735 aa		15.99	■□□□□ 0.15
UMPS-209	ENST00000497791	DDX27	Q96GQ7	796 aa	Known RBP	15.99	■□□□□ 0.15

Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms