RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 PARNO95453 639 aaKnown RBP13.06□□□□□ -0.32
HPS1-213ENST00000497527 CST3P01034 146 aaPredicted RBP13.06□□□□□ -0.32
HPS1-213ENST00000497527 ITGB3P05106 788 aa13.06□□□□□ -0.32
HPS1-213ENST00000497527 GHRP10912 638 aa13.06□□□□□ -0.32
HPS1-213ENST00000497527 HSPA8P11142 646 aaKnown RBP13.06□□□□□ -0.32
HPS1-213ENST00000497527 CKBP12277 381 aa13.06□□□□□ -0.32
HPS1-213ENST00000497527 ITGA4P13612 1032 aa13.06□□□□□ -0.32
HPS1-213ENST00000497527 PNPLA4P41247 253 aa13.06□□□□□ -0.32
HPS1-213ENST00000497527 CDK7P50613 346 aa13.06□□□□□ -0.32
HPS1-213ENST00000497527 MYL6P60660 151 aa13.06□□□□□ -0.32
HPS1-213ENST00000497527 MTFR1Q15390 333 aa13.06□□□□□ -0.32
HPS1-213ENST00000497527 IFI16Q16666 785 aaKnown RBP13.06□□□□□ -0.32
HPS1-213ENST00000497527 ZNF618Q5T7W0 954 aa13.06□□□□□ -0.32
HPS1-213ENST00000497527 ALKBH5Q6P6C2 394 aaKnown RBP13.06□□□□□ -0.32
HPS1-213ENST00000497527 LRRC52Q8N7C0 313 aa13.06□□□□□ -0.32
HPS1-213ENST00000497527 DNAJC5GQ8N7S2 189 aa13.06□□□□□ -0.32
HPS1-213ENST00000497527 C1orf127Q8N9H9 656 aa13.06□□□□□ -0.32
HPS1-213ENST00000497527 ANKLE1Q8NAG6 615 aa13.06□□□□□ -0.32
HPS1-213ENST00000497527 KAT5Q92993 513 aa13.06□□□□□ -0.32
HPS1-213ENST00000497527 ZNF560Q96MR9 790 aa13.06□□□□□ -0.32
HPS1-213ENST00000497527 RPS6KC1Q96S38 1066 aa13.06□□□□□ -0.32
HPS1-213ENST00000497527 APOL6Q9BWW8 343 aa13.06□□□□□ -0.32
HPS1-213ENST00000497527 FTHL17Q9BXU8 183 aa13.06□□□□□ -0.32
HPS1-213ENST00000497527 CRISPLD2Q9H0B8 497 aa13.06□□□□□ -0.32
HPS1-213ENST00000497527 APOBEC3GQ9HC16 384 aaKnown RBP13.06□□□□□ -0.32
HPS1-213ENST00000497527 UBN1Q9NPG3 1134 aa13.06□□□□□ -0.32
HPS1-213ENST00000497527 NAGPAQ9UK23 515 aa13.06□□□□□ -0.32
HPS1-213ENST00000497527 PADI3Q9ULW8 664 aa13.06□□□□□ -0.32
HPS1-213ENST00000497527 CNTN6Q9UQ52 1028 aa13.06□□□□□ -0.32
HPS1-213ENST00000497527 NUB1Q9Y5A7 615 aa13.06□□□□□ -0.32
HPS1-213ENST00000497527 PCDHB4Q9Y5E5 795 aa13.06□□□□□ -0.32
HPS1-213ENST00000497527 A0A087X0T9 212 aa13.05□□□□□ -0.32
HPS1-213ENST00000497527 PITPNM1O00562 1244 aa13.05□□□□□ -0.32
HPS1-213ENST00000497527 CYP26A1O43174 497 aa13.05□□□□□ -0.32
HPS1-213ENST00000497527 H2AFZP0C0S5 128 aa13.05□□□□□ -0.32
HPS1-213ENST00000497527 FAM228BP0C875 321 aa13.05□□□□□ -0.32
HPS1-213ENST00000497527 GZMAP12544 262 aa13.05□□□□□ -0.32
HPS1-213ENST00000497527 CYP11B1P15538 503 aa13.05□□□□□ -0.32
HPS1-213ENST00000497527 SELPP16109 830 aa13.05□□□□□ -0.32
HPS1-213ENST00000497527 POLR2BP30876 1174 aaKnown RBP13.05□□□□□ -0.32
HPS1-213ENST00000497527 CTCFP49711 727 aaPredicted RBP13.05□□□□□ -0.32
HPS1-213ENST00000497527 GNG11P61952 73 aa13.05□□□□□ -0.32
HPS1-213ENST00000497527 CDR2Q01850 454 aa13.05□□□□□ -0.32
HPS1-213ENST00000497527 CYP27A1Q02318 531 aa13.05□□□□□ -0.32
HPS1-213ENST00000497527 LPIN1Q14693 890 aa13.05□□□□□ -0.32
HPS1-213ENST00000497527 ZBTB6Q15916 424 aa13.05□□□□□ -0.32
HPS1-213ENST00000497527 SPOPLQ6IQ16 392 aa13.05□□□□□ -0.32
HPS1-213ENST00000497527 ALKAL1Q6UXT8 129 aa13.05□□□□□ -0.32
HPS1-213ENST00000497527 TRIM72Q6ZMU5 477 aa13.05□□□□□ -0.32
HPS1-213ENST00000497527 H2AFVQ71UI9 128 aa13.05□□□□□ -0.32
HPS1-213ENST00000497527 MRPL10Q7Z7H8 261 aaKnown RBP13.05□□□□□ -0.32
HPS1-213ENST00000497527 FAM126BQ8IXS8 530 aa13.05□□□□□ -0.32
HPS1-213ENST00000497527 RNF10Q8N5U6 811 aaKnown RBP13.05□□□□□ -0.32
HPS1-213ENST00000497527 SMG8Q8ND04 991 aaKnown RBP13.05□□□□□ -0.32
HPS1-213ENST00000497527 EPS8L1Q8TE68 723 aa13.05□□□□□ -0.32
HPS1-213ENST00000497527 ARMC5Q96C12 935 aa13.05□□□□□ -0.32
HPS1-213ENST00000497527 HPDLQ96IR7 371 aa13.05□□□□□ -0.32
HPS1-213ENST00000497527 ZNF333Q96JL9 665 aa13.05□□□□□ -0.32
HPS1-213ENST00000497527 CALR3Q96L12 384 aaKnown RBP13.05□□□□□ -0.32
HPS1-213ENST00000497527 SYT11Q9BT88 431 aa13.05□□□□□ -0.32
HPS1-213ENST00000497527 XYLT2Q9H1B5 865 aa13.05□□□□□ -0.32
HPS1-213ENST00000497527 TRPV6Q9H1D0 765 aa13.05□□□□□ -0.32
HPS1-213ENST00000497527 AGAP1Q9UPQ3 857 aa13.05□□□□□ -0.32
HPS1-213ENST00000497527 GIT1Q9Y2X7 761 aa13.05□□□□□ -0.32
HPS1-213ENST00000497527 SCN1AP35498 2009 aa13.05□□□□□ -0.32
HPS1-213ENST00000497527 BTNL10A8MVZ5 291 aa13.04□□□□□ -0.32
HPS1-213ENST00000497527 ZNF263O14978 683 aa13.04□□□□□ -0.32
HPS1-213ENST00000497527 MEFVO15553 781 aaPredicted RBP13.04□□□□□ -0.32
HPS1-213ENST00000497527 SGPL1O95470 568 aa13.04□□□□□ -0.32
HPS1-213ENST00000497527 PNMA6AP0CW24 399 aaPredicted RBP13.04□□□□□ -0.32
HPS1-213ENST00000497527 ACO1P21399 889 aaKnown RBP13.04□□□□□ -0.32
HPS1-213ENST00000497527 CD52P31358 61 aa13.04□□□□□ -0.32
HPS1-213ENST00000497527 ARHGAP25P42331 645 aa13.04□□□□□ -0.32
HPS1-213ENST00000497527 TNNC1P63316 161 aa13.04□□□□□ -0.32
HPS1-213ENST00000497527 DSC3Q14574 896 aa13.04□□□□□ -0.32
HPS1-213ENST00000497527 TMEM270Q6UE05 265 aa13.04□□□□□ -0.32
HPS1-213ENST00000497527 LRRC8DQ7L1W4 858 aa13.04□□□□□ -0.32
HPS1-213ENST00000497527 UBR7Q8N806 425 aa13.04□□□□□ -0.32
HPS1-213ENST00000497527 SLC30A5Q8TAD4 765 aa13.04□□□□□ -0.32
HPS1-213ENST00000497527 U2AF1L4Q8WU68 220 aaKnown RBP13.04□□□□□ -0.32
HPS1-213ENST00000497527 SECISBP2LQ93073 1101 aaKnown RBP13.04□□□□□ -0.32
HPS1-213ENST00000497527 FAM84AQ96KN4 292 aa13.04□□□□□ -0.32
HPS1-213ENST00000497527 ALS2CR12Q96Q35 445 aa13.04□□□□□ -0.32
HPS1-213ENST00000497527 BCO2Q9BYV7 579 aa13.04□□□□□ -0.32
HPS1-213ENST00000497527 AGO3Q9H9G7 860 aaKnown RBP13.04□□□□□ -0.32
HPS1-213ENST00000497527 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.04□□□□□ -0.32
HPS1-213ENST00000497527 SEPT11Q9NVA2 429 aaKnown RBP13.04□□□□□ -0.32
HPS1-213ENST00000497527 RNF216Q9NWF9 866 aaPredicted RBP13.04□□□□□ -0.32
HPS1-213ENST00000497527 SIX4Q9UIU6 781 aa13.04□□□□□ -0.32
HPS1-213ENST00000497527 NOCTQ9UK39 431 aaKnown RBP13.04□□□□□ -0.32
HPS1-213ENST00000497527 A0A0U1RQF3 1178 aa13.03□□□□□ -0.32
HPS1-213ENST00000497527 SMIM28A0A1B0GU29 152 aa13.03□□□□□ -0.32
HPS1-213ENST00000497527 DCDC2CA8MYV0 355 aa13.03□□□□□ -0.32
HPS1-213ENST00000497527 DDX3XO00571 662 aaKnown RBP eCLIP13.03□□□□□ -0.32
HPS1-213ENST00000497527 TACC1O75410 805 aa13.03□□□□□ -0.32
HPS1-213ENST00000497527 TFRCP02786 760 aaKnown RBP13.03□□□□□ -0.32
HPS1-213ENST00000497527 PAX3P23760 479 aa13.03□□□□□ -0.32
HPS1-213ENST00000497527 AKAP5P24588 427 aa13.03□□□□□ -0.32
HPS1-213ENST00000497527 CASQ1P31415 396 aa13.03□□□□□ -0.32
HPS1-213ENST00000497527 ASPAP45381 313 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms