RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 GDAP2Q9NXN4 497 aa21.27■■□□□ 1
SCAMP3-209ENST00000497470 PTPRSQ13332 1948 aa21.27■■□□□ 1
SCAMP3-209ENST00000497470 TLL1O43897 1013 aa21.26■□□□□ 0.99
SCAMP3-209ENST00000497470 VNN1O95497 513 aa21.26■□□□□ 0.99
SCAMP3-209ENST00000497470 PPM1AP35813 382 aa21.26■□□□□ 0.99
SCAMP3-209ENST00000497470 SOX4Q06945 474 aaPredicted RBP21.26■□□□□ 0.99
SCAMP3-209ENST00000497470 ELAVL2Q12926 359 aaKnown RBP21.26■□□□□ 0.99
SCAMP3-209ENST00000497470 RAB30Q15771 203 aa21.26■□□□□ 0.99
SCAMP3-209ENST00000497470 HSP90AA4PQ58FG1 418 aa21.26■□□□□ 0.99
SCAMP3-209ENST00000497470 C18orf25Q96B23 403 aaPredicted RBP21.26■□□□□ 0.99
SCAMP3-209ENST00000497470 PLVAPQ9BX97 442 aa21.26■□□□□ 0.99
SCAMP3-209ENST00000497470 XYLT2Q9H1B5 865 aa21.26■□□□□ 0.99
SCAMP3-209ENST00000497470 TUBGCP4Q9UGJ1 667 aa21.26■□□□□ 0.99
SCAMP3-209ENST00000497470 CEP290O15078 2479 aa21.25■□□□□ 0.99
SCAMP3-209ENST00000497470 HLA-DRAP01903 254 aa21.25■□□□□ 0.99
SCAMP3-209ENST00000497470 ITGB3P05106 788 aa21.25■□□□□ 0.99
SCAMP3-209ENST00000497470 GALTP07902 379 aa21.25■□□□□ 0.99
SCAMP3-209ENST00000497470 ALDH7A1P49419 539 aaKnown RBP21.25■□□□□ 0.99
SCAMP3-209ENST00000497470 TAF6P49848 677 aa21.25■□□□□ 0.99
SCAMP3-209ENST00000497470 MRE11P49959 708 aa21.25■□□□□ 0.99
SCAMP3-209ENST00000497470 GSE1Q14687 1217 aa21.25■□□□□ 0.99
SCAMP3-209ENST00000497470 SV2CQ496J9 727 aa21.25■□□□□ 0.99
SCAMP3-209ENST00000497470 FIGNQ5HY92 759 aa21.25■□□□□ 0.99
SCAMP3-209ENST00000497470 LIMS2Q7Z4I7 341 aa21.25■□□□□ 0.99
SCAMP3-209ENST00000497470 ZNF280BQ86YH2 543 aa21.25■□□□□ 0.99
SCAMP3-209ENST00000497470 TTC39CQ8N584 583 aa21.25■□□□□ 0.99
SCAMP3-209ENST00000497470 TAS1R2Q8TE23 839 aa21.25■□□□□ 0.99
SCAMP3-209ENST00000497470 MRFAP1L1Q96HT8 127 aa21.25■□□□□ 0.99
SCAMP3-209ENST00000497470 EDEM3Q9BZQ6 932 aa21.25■□□□□ 0.99
SCAMP3-209ENST00000497470 FAN1Q9Y2M0 1017 aa21.25■□□□□ 0.99
SCAMP3-209ENST00000497470 PODXLO00592 558 aa21.24■□□□□ 0.99
SCAMP3-209ENST00000497470 TRAPPC3O43617 180 aa21.24■□□□□ 0.99
SCAMP3-209ENST00000497470 CST3P01034 146 aaPredicted RBP21.24■□□□□ 0.99
SCAMP3-209ENST00000497470 RB1P06400 928 aa21.24■□□□□ 0.99
SCAMP3-209ENST00000497470 P4HA1P13674 534 aa21.24■□□□□ 0.99
SCAMP3-209ENST00000497470 POLR2BP30876 1174 aaKnown RBP21.24■□□□□ 0.99
SCAMP3-209ENST00000497470 PBX1P40424 430 aa21.24■□□□□ 0.99
SCAMP3-209ENST00000497470 PIK3CAP42336 1068 aa21.24■□□□□ 0.99
SCAMP3-209ENST00000497470 LILRA4P59901 499 aa21.24■□□□□ 0.99
SCAMP3-209ENST00000497470 SMAD3P84022 425 aaKnown RBP21.24■□□□□ 0.99
SCAMP3-209ENST00000497470 UBXN1Q04323 297 aa21.24■□□□□ 0.99
SCAMP3-209ENST00000497470 WDR44Q5JSH3 913 aa21.24■□□□□ 0.99
SCAMP3-209ENST00000497470 LMBRD2Q68DH5 695 aaPredicted RBP21.24■□□□□ 0.99
SCAMP3-209ENST00000497470 ENOSF1Q7L5Y1 443 aa21.24■□□□□ 0.99
SCAMP3-209ENST00000497470 ZNF558Q96NG5 402 aa21.24■□□□□ 0.99
SCAMP3-209ENST00000497470 NAP1L5Q96NT1 182 aaPredicted RBP21.24■□□□□ 0.99
SCAMP3-209ENST00000497470 AGAP1Q9UPQ3 857 aa21.24■□□□□ 0.99
SCAMP3-209ENST00000497470 ITIH6Q6UXX5 1313 aa21.24■□□□□ 0.99
SCAMP3-209ENST00000497470 C5orf67F2Z3F1 127 aa21.23■□□□□ 0.99
SCAMP3-209ENST00000497470 EFEMP2O95967 443 aa21.23■□□□□ 0.99
SCAMP3-209ENST00000497470 LINC00271P0C7V0 271 aa21.23■□□□□ 0.99
SCAMP3-209ENST00000497470 GATMP50440 423 aa21.23■□□□□ 0.99
SCAMP3-209ENST00000497470 CLCNKBP51801 687 aa21.23■□□□□ 0.99
SCAMP3-209ENST00000497470 GCNT1Q02742 428 aa21.23■□□□□ 0.99
SCAMP3-209ENST00000497470 KCNMA1Q12791 1236 aa21.23■□□□□ 0.99
SCAMP3-209ENST00000497470 TRIM65Q6PJ69 517 aa21.23■□□□□ 0.99
SCAMP3-209ENST00000497470 KCNT2Q6UVM3 1135 aa21.23■□□□□ 0.99
SCAMP3-209ENST00000497470 HPDLQ96IR7 371 aa21.23■□□□□ 0.99
SCAMP3-209ENST00000497470 NUP58Q9BVL2 599 aa21.23■□□□□ 0.99
SCAMP3-209ENST00000497470 GRPEL1Q9HAV7 217 aa21.23■□□□□ 0.99
SCAMP3-209ENST00000497470 CYP3A43Q9HB55 503 aa21.23■□□□□ 0.99
SCAMP3-209ENST00000497470 IFNKQ9P0W0 207 aa21.23■□□□□ 0.99
SCAMP3-209ENST00000497470 GCNT4Q9P109 453 aa21.23■□□□□ 0.99
SCAMP3-209ENST00000497470 SIK3Q9Y2K2 1263 aa21.23■□□□□ 0.99
SCAMP3-209ENST00000497470 M0QZQ0 153 aa21.22■□□□□ 0.99
SCAMP3-209ENST00000497470 NRP1O14786 923 aa21.22■□□□□ 0.99
SCAMP3-209ENST00000497470 TBXAS1P24557 533 aaPredicted RBP21.22■□□□□ 0.99
SCAMP3-209ENST00000497470 PON1P27169 355 aa21.22■□□□□ 0.99
SCAMP3-209ENST00000497470 BCAR1P56945 870 aa21.22■□□□□ 0.99
SCAMP3-209ENST00000497470 PLCB3Q01970 1234 aa21.22■□□□□ 0.99
SCAMP3-209ENST00000497470 LRIT3Q3SXY7 679 aa21.22■□□□□ 0.99
SCAMP3-209ENST00000497470 SUSD3Q96L08 255 aa21.22■□□□□ 0.99
SCAMP3-209ENST00000497470 NT5C1BQ96P26 610 aa21.22■□□□□ 0.99
SCAMP3-209ENST00000497470 XPO4Q9C0E2 1151 aaKnown RBP21.22■□□□□ 0.99
SCAMP3-209ENST00000497470 DSEQ9UL01 958 aa21.22■□□□□ 0.99
SCAMP3-209ENST00000497470 LZTS1Q9Y250 596 aa21.22■□□□□ 0.99
SCAMP3-209ENST00000497470 PCDHB12Q9Y5F1 795 aa21.22■□□□□ 0.99
SCAMP3-209ENST00000497470 MRPL42Q9Y6G3 142 aaKnown RBP21.22■□□□□ 0.99
SCAMP3-209ENST00000497470 KPNA7A9QM74 516 aa21.21■□□□□ 0.99
SCAMP3-209ENST00000497470 PES1O00541 588 aaKnown RBP21.21■□□□□ 0.99
SCAMP3-209ENST00000497470 SYN3O14994 580 aa21.21■□□□□ 0.99
SCAMP3-209ENST00000497470 B3GAT3O94766 335 aa21.21■□□□□ 0.99
SCAMP3-209ENST00000497470 SLC11A1P49279 550 aa21.21■□□□□ 0.99
SCAMP3-209ENST00000497470 MYL6P60660 151 aa21.21■□□□□ 0.99
SCAMP3-209ENST00000497470 ZNF699Q32M78 642 aa21.21■□□□□ 0.99
SCAMP3-209ENST00000497470 ZNF667Q5HYK9 610 aa21.21■□□□□ 0.99
SCAMP3-209ENST00000497470 DPY19L2P1Q6NXN4 242 aa21.21■□□□□ 0.99
SCAMP3-209ENST00000497470 CD300LGQ6UXG3 332 aa21.21■□□□□ 0.99
SCAMP3-209ENST00000497470 FMNL3Q8IVF7 1028 aa21.21■□□□□ 0.99
SCAMP3-209ENST00000497470 RNF168Q8IYW5 571 aaPredicted RBP21.21■□□□□ 0.99
SCAMP3-209ENST00000497470 SLC39A11Q8N1S5 342 aa21.21■□□□□ 0.99
SCAMP3-209ENST00000497470 TOP6BLQ8N6T0 577 aa21.21■□□□□ 0.99
SCAMP3-209ENST00000497470 COLGALT1Q8NBJ5 622 aa21.21■□□□□ 0.99
SCAMP3-209ENST00000497470 SEMA4DQ92854 862 aa21.21■□□□□ 0.99
SCAMP3-209ENST00000497470 OXCT2Q9BYC2 517 aaPredicted RBP21.21■□□□□ 0.99
SCAMP3-209ENST00000497470 TRIM5Q9C035 493 aa21.21■□□□□ 0.99
SCAMP3-209ENST00000497470 INTS2Q9H0H0 1204 aaKnown RBP21.21■□□□□ 0.99
SCAMP3-209ENST00000497470 SPG21Q9NZD8 308 aa21.21■□□□□ 0.99
SCAMP3-209ENST00000497470 APEX2Q9UBZ4 518 aa21.21■□□□□ 0.99
SCAMP3-209ENST00000497470 DNAJB4Q9UDY4 337 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms