RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 PCDHGA7Q9Y5G6 932 aa4.43□□□□□ -1.7
VPS26A-208ENST00000497022 PCDHGA6Q9Y5G7 932 aa4.43□□□□□ -1.7
VPS26A-208ENST00000497022 PCDHGA3Q9Y5H0 932 aa4.43□□□□□ -1.7
VPS26A-208ENST00000497022 PCDHA13Q9Y5I0 950 aa4.43□□□□□ -1.7
VPS26A-208ENST00000497022 KIAA0391O15091 583 aaKnown RBP4.42□□□□□ -1.7
VPS26A-208ENST00000497022 ESRRBO95718 433 aa4.42□□□□□ -1.7
VPS26A-208ENST00000497022 MYBL2P10244 700 aa4.42□□□□□ -1.7
VPS26A-208ENST00000497022 MPLP40238 635 aa4.42□□□□□ -1.7
VPS26A-208ENST00000497022 SLC16A1P53985 500 aa4.42□□□□□ -1.7
VPS26A-208ENST00000497022 NOMO3P69849 1222 aa4.42□□□□□ -1.7
VPS26A-208ENST00000497022 AMPD3Q01432 767 aa4.42□□□□□ -1.7
VPS26A-208ENST00000497022 CREMQ03060 361 aa4.42□□□□□ -1.7
VPS26A-208ENST00000497022 ITKQ08881 620 aa4.42□□□□□ -1.7
VPS26A-208ENST00000497022 TARDBPQ13148 414 aaKnown RBP eCLIP4.42□□□□□ -1.7
VPS26A-208ENST00000497022 ACAP2Q15057 778 aa4.42□□□□□ -1.7
VPS26A-208ENST00000497022 ATP2B3Q16720 1220 aa4.42□□□□□ -1.7
VPS26A-208ENST00000497022 NOMO2Q5JPE7 1267 aa4.42□□□□□ -1.7
VPS26A-208ENST00000497022 FOXR2Q6PJQ5 311 aa4.42□□□□□ -1.7
VPS26A-208ENST00000497022 MIGA2Q7L4E1 593 aa4.42□□□□□ -1.7
VPS26A-208ENST00000497022 DCBLD1Q8N8Z6 715 aa4.42□□□□□ -1.7
VPS26A-208ENST00000497022 NUP133Q8WUM0 1156 aa4.42□□□□□ -1.7
VPS26A-208ENST00000497022 HDAC10Q969S8 669 aa4.42□□□□□ -1.7
VPS26A-208ENST00000497022 NACC2Q96BF6 587 aa4.42□□□□□ -1.7
VPS26A-208ENST00000497022 RNF31Q96EP0 1072 aa4.42□□□□□ -1.7
VPS26A-208ENST00000497022 LRFN3Q9BTN0 628 aa4.42□□□□□ -1.7
VPS26A-208ENST00000497022 C11orf54Q9H0W9 315 aaPredicted RBP4.42□□□□□ -1.7
VPS26A-208ENST00000497022 GALNT9Q9HCQ5 603 aa4.42□□□□□ -1.7
VPS26A-208ENST00000497022 TDP1Q9NUW8 608 aa4.42□□□□□ -1.7
VPS26A-208ENST00000497022 KCNE5Q9UJ90 142 aa4.42□□□□□ -1.7
VPS26A-208ENST00000497022 IPPQ9Y573 584 aa4.42□□□□□ -1.7
VPS26A-208ENST00000497022 MAST3O60307 1309 aa4.42□□□□□ -1.7
VPS26A-208ENST00000497022 SHTN1A0MZ66 631 aa4.41□□□□□ -1.7
VPS26A-208ENST00000497022 CDHR4A6H8M9 788 aa4.41□□□□□ -1.7
VPS26A-208ENST00000497022 MYADML2A6NDP7 307 aa4.41□□□□□ -1.7
VPS26A-208ENST00000497022 FZD9O00144 591 aa4.41□□□□□ -1.7
VPS26A-208ENST00000497022 GABRDO14764 452 aa4.41□□□□□ -1.7
VPS26A-208ENST00000497022 XPOTO43592 962 aaKnown RBP4.41□□□□□ -1.7
VPS26A-208ENST00000497022 KATNA1O75449 491 aa4.41□□□□□ -1.7
VPS26A-208ENST00000497022 FDXRP22570 491 aa4.41□□□□□ -1.7
VPS26A-208ENST00000497022 CXCR5P32302 372 aa4.41□□□□□ -1.7
VPS26A-208ENST00000497022 KRT85P78386 507 aa4.41□□□□□ -1.7
VPS26A-208ENST00000497022 CDC42EP1Q00587 391 aa4.41□□□□□ -1.7
VPS26A-208ENST00000497022 NHLH1Q02575 133 aa4.41□□□□□ -1.7
VPS26A-208ENST00000497022 FOXF2Q12947 444 aa4.41□□□□□ -1.7
VPS26A-208ENST00000497022 MAPK7Q13164 816 aa4.41□□□□□ -1.7
VPS26A-208ENST00000497022 MPP3Q13368 585 aa4.41□□□□□ -1.7
VPS26A-208ENST00000497022 PCBP2Q15366 365 aaKnown RBP eCLIP4.41□□□□□ -1.7
VPS26A-208ENST00000497022 CYP2A13Q16696 494 aa4.41□□□□□ -1.7
VPS26A-208ENST00000497022 ABCB5Q2M3G0 1257 aa4.41□□□□□ -1.7
VPS26A-208ENST00000497022 RSPH3Q86UC2 560 aa4.41□□□□□ -1.7
VPS26A-208ENST00000497022 PRPF38AQ8NAV1 312 aaKnown RBP4.41□□□□□ -1.7
VPS26A-208ENST00000497022 NLGN4YQ8NFZ3 816 aaPredicted RBP4.41□□□□□ -1.7
VPS26A-208ENST00000497022 TBC1D15Q8TC07 691 aa4.41□□□□□ -1.7
VPS26A-208ENST00000497022 SCARB1Q8WTV0 552 aa4.41□□□□□ -1.7
VPS26A-208ENST00000497022 SMG7Q92540 1137 aaKnown RBP4.41□□□□□ -1.7
VPS26A-208ENST00000497022 ANKS1AQ92625 1134 aa4.41□□□□□ -1.7
VPS26A-208ENST00000497022 RAB24Q969Q5 203 aa4.41□□□□□ -1.7
VPS26A-208ENST00000497022 TMX3Q96JJ7 454 aa4.41□□□□□ -1.7
VPS26A-208ENST00000497022 Q96MF0 132 aa4.41□□□□□ -1.7
VPS26A-208ENST00000497022 PNKPQ96T60 521 aa4.41□□□□□ -1.7
VPS26A-208ENST00000497022 HSFX1Q9UBD0 423 aa4.41□□□□□ -1.7
VPS26A-208ENST00000497022 TESQ9UGI8 421 aaKnown RBP4.41□□□□□ -1.7
VPS26A-208ENST00000497022 LIMCH1Q9UPQ0 1083 aa4.41□□□□□ -1.7
VPS26A-208ENST00000497022 MTO1Q9Y2Z2 717 aaKnown RBP4.41□□□□□ -1.7
VPS26A-208ENST00000497022 HTRA2O43464 458 aaPredicted RBP4.4□□□□□ -1.71
VPS26A-208ENST00000497022 SGTAO43765 313 aa4.4□□□□□ -1.71
VPS26A-208ENST00000497022 EDNRBP24530 442 aa4.4□□□□□ -1.71
VPS26A-208ENST00000497022 SLC6A4P31645 630 aa4.4□□□□□ -1.71
VPS26A-208ENST00000497022 EVA1CP58658 441 aa4.4□□□□□ -1.71
VPS26A-208ENST00000497022 SLFN5Q08AF3 891 aa4.4□□□□□ -1.71
VPS26A-208ENST00000497022 IL10RAQ13651 578 aa4.4□□□□□ -1.71
VPS26A-208ENST00000497022 FAM50AQ14320 339 aaKnown RBP4.4□□□□□ -1.71
VPS26A-208ENST00000497022 SRRM1Q8IYB3 904 aaKnown RBP4.4□□□□□ -1.71
VPS26A-208ENST00000497022 SLC44A3Q8N4M1 653 aa4.4□□□□□ -1.71
VPS26A-208ENST00000497022 Q8NA96 180 aa4.4□□□□□ -1.71
VPS26A-208ENST00000497022 IFI44Q8TCB0 444 aa4.4□□□□□ -1.71
VPS26A-208ENST00000497022 COA7Q96BR5 231 aa4.4□□□□□ -1.71
VPS26A-208ENST00000497022 MTMR8Q96EF0 704 aa4.4□□□□□ -1.71
VPS26A-208ENST00000497022 TEKT5Q96M29 485 aa4.4□□□□□ -1.71
VPS26A-208ENST00000497022 MED15Q96RN5 788 aa4.4□□□□□ -1.71
VPS26A-208ENST00000497022 KRTAP1-5Q9BYS1 174 aa4.4□□□□□ -1.71
VPS26A-208ENST00000497022 UNKLQ9H9P5 680 aaKnown RBP4.4□□□□□ -1.71
VPS26A-208ENST00000497022 TBCCD1Q9NVR7 557 aa4.4□□□□□ -1.71
VPS26A-208ENST00000497022 MRFAP1Q9Y605 127 aa4.4□□□□□ -1.71
VPS26A-208ENST00000497022 SETD1BQ9UPS6 1966 aaKnown RBP4.4□□□□□ -1.71
VPS26A-208ENST00000497022 CCDC154A6NI56 674 aa4.39□□□□□ -1.71
VPS26A-208ENST00000497022 ALG1L2C9J202 215 aa4.39□□□□□ -1.71
VPS26A-208ENST00000497022 GRM6O15303 877 aa4.39□□□□□ -1.71
VPS26A-208ENST00000497022 ERN1O75460 977 aaKnown RBP4.39□□□□□ -1.71
VPS26A-208ENST00000497022 HAUS5O94927 633 aa4.39□□□□□ -1.71
VPS26A-208ENST00000497022 ZFPL1O95159 310 aa4.39□□□□□ -1.71
VPS26A-208ENST00000497022 SBK3P0C264 359 aa4.39□□□□□ -1.71
VPS26A-208ENST00000497022 MTHFD1P11586 935 aaKnown RBP4.39□□□□□ -1.71
VPS26A-208ENST00000497022 FCER1AP12319 257 aa4.39□□□□□ -1.71
VPS26A-208ENST00000497022 PLA2G5P39877 138 aa4.39□□□□□ -1.71
VPS26A-208ENST00000497022 VAV2P52735 878 aa4.39□□□□□ -1.71
VPS26A-208ENST00000497022 ZNF280AP59817 542 aaPredicted RBP4.39□□□□□ -1.71
VPS26A-208ENST00000497022 KRTAP10-7P60409 375 aaPredicted RBP4.39□□□□□ -1.71
VPS26A-208ENST00000497022 KIF23Q02241 960 aaPredicted RBP4.39□□□□□ -1.71
VPS26A-208ENST00000497022 C3orf36Q3SXR2 165 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms