RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 AFPP02771 609 aaKnown RBP14.56□□□□□ -0.08
PTPN7-218ENST00000496197 KRT19P08727 400 aa14.56□□□□□ -0.08
PTPN7-218ENST00000496197 MXI1P50539 228 aa14.56□□□□□ -0.08
PTPN7-218ENST00000496197 MYL6P60660 151 aa14.56□□□□□ -0.08
PTPN7-218ENST00000496197 APBA1Q02410 837 aa14.56□□□□□ -0.08
PTPN7-218ENST00000496197 TAP1Q03518 808 aa14.56□□□□□ -0.08
PTPN7-218ENST00000496197 BIRC3Q13489 604 aa14.56□□□□□ -0.08
PTPN7-218ENST00000496197 VWA3BQ502W6 1294 aa14.56□□□□□ -0.08
PTPN7-218ENST00000496197 SPOUT1Q5T280 376 aaKnown RBP14.56□□□□□ -0.08
PTPN7-218ENST00000496197 KRT39Q6A163 491 aa14.56□□□□□ -0.08
PTPN7-218ENST00000496197 KCNT2Q6UVM3 1135 aa14.56□□□□□ -0.08
PTPN7-218ENST00000496197 CACTINQ8WUQ7 758 aaKnown RBP14.56□□□□□ -0.08
PTPN7-218ENST00000496197 RSPH1Q8WYR4 309 aa14.56□□□□□ -0.08
PTPN7-218ENST00000496197 NAP1L5Q96NT1 182 aaPredicted RBP14.56□□□□□ -0.08
PTPN7-218ENST00000496197 PI4K2AQ9BTU6 479 aa14.56□□□□□ -0.08
PTPN7-218ENST00000496197 VN1R3Q9BXE9 311 aa14.56□□□□□ -0.08
PTPN7-218ENST00000496197 XYLT2Q9H1B5 865 aa14.56□□□□□ -0.08
PTPN7-218ENST00000496197 NDST4Q9H3R1 872 aa14.56□□□□□ -0.08
PTPN7-218ENST00000496197 ITGA11Q9UKX5 1188 aa14.56□□□□□ -0.08
PTPN7-218ENST00000496197 LRRC10BA6NIK2 292 aa14.55□□□□□ -0.08
PTPN7-218ENST00000496197 I3L4J1 428 aa14.55□□□□□ -0.08
PTPN7-218ENST00000496197 SOX1O00570 391 aaPredicted RBP14.55□□□□□ -0.08
PTPN7-218ENST00000496197 HLA-DRAP01903 254 aa14.55□□□□□ -0.08
PTPN7-218ENST00000496197 CDK11BP21127 795 aaKnown RBP14.55□□□□□ -0.08
PTPN7-218ENST00000496197 DNAJB2P25686 324 aa14.55□□□□□ -0.08
PTPN7-218ENST00000496197 GTF2H1P32780 548 aa14.55□□□□□ -0.08
PTPN7-218ENST00000496197 BRCC3P46736 316 aa14.55□□□□□ -0.08
PTPN7-218ENST00000496197 MYL7Q01449 175 aa14.55□□□□□ -0.08
PTPN7-218ENST00000496197 EPC2Q52LR7 807 aa14.55□□□□□ -0.08
PTPN7-218ENST00000496197 SPOPLQ6IQ16 392 aa14.55□□□□□ -0.08
PTPN7-218ENST00000496197 SLC39A11Q8N1S5 342 aa14.55□□□□□ -0.08
PTPN7-218ENST00000496197 LMO3Q8TAP4 145 aa14.55□□□□□ -0.08
PTPN7-218ENST00000496197 TMEM175Q9BSA9 504 aa14.55□□□□□ -0.08
PTPN7-218ENST00000496197 CERS4Q9HA82 394 aa14.55□□□□□ -0.08
PTPN7-218ENST00000496197 MTUS1Q9ULD2 1270 aa14.55□□□□□ -0.08
PTPN7-218ENST00000496197 COQ4Q9Y3A0 265 aa14.55□□□□□ -0.08
PTPN7-218ENST00000496197 TEX33O43247 280 aa14.54□□□□□ -0.08
PTPN7-218ENST00000496197 XPOTO43592 962 aaKnown RBP14.54□□□□□ -0.08
PTPN7-218ENST00000496197 B3GAT3O94766 335 aa14.54□□□□□ -0.08
PTPN7-218ENST00000496197 SLC34A2O95436 690 aa14.54□□□□□ -0.08
PTPN7-218ENST00000496197 EFEMP2O95967 443 aa14.54□□□□□ -0.08
PTPN7-218ENST00000496197 LAG3P18627 525 aa14.54□□□□□ -0.08
PTPN7-218ENST00000496197 PIK3CAP42336 1068 aa14.54□□□□□ -0.08
PTPN7-218ENST00000496197 KLK7P49862 253 aa14.54□□□□□ -0.08
PTPN7-218ENST00000496197 AP3M2P53677 418 aa14.54□□□□□ -0.08
PTPN7-218ENST00000496197 SMAD3P84022 425 aaKnown RBP14.54□□□□□ -0.08
PTPN7-218ENST00000496197 FANCCQ00597 558 aa14.54□□□□□ -0.08
PTPN7-218ENST00000496197 KCNMA1Q12791 1236 aa14.54□□□□□ -0.08
PTPN7-218ENST00000496197 NCOA4Q13772 614 aa14.54□□□□□ -0.08
PTPN7-218ENST00000496197 LRIT3Q3SXY7 679 aa14.54□□□□□ -0.08
PTPN7-218ENST00000496197 DPY19L2P1Q6NXN4 242 aa14.54□□□□□ -0.08
PTPN7-218ENST00000496197 USP37Q86T82 979 aa14.54□□□□□ -0.08
PTPN7-218ENST00000496197 UROC1Q96N76 676 aa14.54□□□□□ -0.08
PTPN7-218ENST00000496197 ZNF558Q96NG5 402 aa14.54□□□□□ -0.08
PTPN7-218ENST00000496197 CRACR2AQ9BSW2 395 aa14.54□□□□□ -0.08
PTPN7-218ENST00000496197 ANP32EQ9BTT0 268 aa14.54□□□□□ -0.08
PTPN7-218ENST00000496197 APOBEC3GQ9HC16 384 aaKnown RBP14.54□□□□□ -0.08
PTPN7-218ENST00000496197 FAN1Q9Y2M0 1017 aa14.54□□□□□ -0.08
PTPN7-218ENST00000496197 A0A1W2PPC1 479 aa14.53□□□□□ -0.08
PTPN7-218ENST00000496197 EPOPA6NHQ4 379 aa14.53□□□□□ -0.08
PTPN7-218ENST00000496197 TMEM189-UBE2V1I3L0A0 370 aa14.53□□□□□ -0.08
PTPN7-218ENST00000496197 PHACTR2O75167 634 aa14.53□□□□□ -0.08
PTPN7-218ENST00000496197 ALDH2P05091 517 aa14.53□□□□□ -0.08
PTPN7-218ENST00000496197 RPL9P32969 192 aaKnown RBP14.53□□□□□ -0.08
PTPN7-218ENST00000496197 AARSP49588 968 aaKnown RBP eCLIP14.53□□□□□ -0.08
PTPN7-218ENST00000496197 LILRA4P59901 499 aa14.53□□□□□ -0.08
PTPN7-218ENST00000496197 RBP5P82980 135 aa14.53□□□□□ -0.08
PTPN7-218ENST00000496197 TIGD5Q53EQ6 642 aa14.53□□□□□ -0.08
PTPN7-218ENST00000496197 TAS1R1Q7RTX1 841 aa14.53□□□□□ -0.08
PTPN7-218ENST00000496197 FBXL13Q8NEE6 735 aa14.53□□□□□ -0.08
PTPN7-218ENST00000496197 IGSF21Q96ID5 467 aa14.53□□□□□ -0.08
PTPN7-218ENST00000496197 B3GALT6Q96L58 329 aa14.53□□□□□ -0.08
PTPN7-218ENST00000496197 GPR62Q9BZJ7 368 aa14.53□□□□□ -0.08
PTPN7-218ENST00000496197 RAB20Q9NX57 234 aa14.53□□□□□ -0.08
PTPN7-218ENST00000496197 ADAM28Q9UKQ2 775 aa14.53□□□□□ -0.08
PTPN7-218ENST00000496197 A0A1B0GTH6 734 aa14.52□□□□□ -0.08
PTPN7-218ENST00000496197 LGALS16A8MUM7 142 aa14.52□□□□□ -0.08
PTPN7-218ENST00000496197 PES1O00541 588 aaKnown RBP14.52□□□□□ -0.08
PTPN7-218ENST00000496197 PMM2O15305 246 aa14.52□□□□□ -0.08
PTPN7-218ENST00000496197 STX10O60499 249 aa14.52□□□□□ -0.08
PTPN7-218ENST00000496197 ASS1P00966 412 aaKnown RBP14.52□□□□□ -0.08
PTPN7-218ENST00000496197 SLC9A1P19634 815 aa14.52□□□□□ -0.08
PTPN7-218ENST00000496197 CTNNB1P35222 781 aa14.52□□□□□ -0.08
PTPN7-218ENST00000496197 BMPR1AP36894 532 aa14.52□□□□□ -0.08
PTPN7-218ENST00000496197 ALDH7A1P49419 539 aaKnown RBP14.52□□□□□ -0.08
PTPN7-218ENST00000496197 RAB30Q15771 203 aa14.52□□□□□ -0.08
PTPN7-218ENST00000496197 PPP2R2DQ66LE6 453 aa14.52□□□□□ -0.08
PTPN7-218ENST00000496197 DCLRE1AQ6PJP8 1040 aa14.52□□□□□ -0.08
PTPN7-218ENST00000496197 RNF168Q8IYW5 571 aaPredicted RBP14.52□□□□□ -0.08
PTPN7-218ENST00000496197 LRRC52Q8N7C0 313 aa14.52□□□□□ -0.08
PTPN7-218ENST00000496197 KLHL23Q8NBE8 558 aa14.52□□□□□ -0.08
PTPN7-218ENST00000496197 TATDN2Q93075 761 aa14.52□□□□□ -0.08
PTPN7-218ENST00000496197 DDX27Q96GQ7 796 aaKnown RBP14.52□□□□□ -0.08
PTPN7-218ENST00000496197 HPDLQ96IR7 371 aa14.52□□□□□ -0.08
PTPN7-218ENST00000496197 SIX2Q9NPC8 291 aa14.52□□□□□ -0.08
PTPN7-218ENST00000496197 RTN4Q9NQC3 1192 aaKnown RBP14.52□□□□□ -0.08
PTPN7-218ENST00000496197 GCNT4Q9P109 453 aa14.52□□□□□ -0.08
PTPN7-218ENST00000496197 MSRAQ9UJ68 235 aa14.52□□□□□ -0.08
PTPN7-218ENST00000496197 POLIQ9UNA4 740 aa14.52□□□□□ -0.08
PTPN7-218ENST00000496197 NUB1Q9Y5A7 615 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms