RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 ASGR2P07307 311 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 ZNF865P0CJ78 1059 aaPredicted RBP5.01□□□□□ -1.61
VPS52-222ENST00000495981 SRFP11831 508 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 AKR1B1P15121 316 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 RECQLP46063 649 aaPredicted RBP5.01□□□□□ -1.61
VPS52-222ENST00000495981 KPNA1P52294 538 aaPredicted RBP5.01□□□□□ -1.61
VPS52-222ENST00000495981 SESN3P58005 492 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 CCNA1P78396 465 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 ICA1Q05084 483 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 KCNAB2Q13303 367 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 OS9Q13438 667 aaPredicted RBP5.01□□□□□ -1.61
VPS52-222ENST00000495981 DHX8Q14562 1220 aaKnown RBP5.01□□□□□ -1.61
VPS52-222ENST00000495981 SART3Q15020 963 aaKnown RBP5.01□□□□□ -1.61
VPS52-222ENST00000495981 KCNA10Q16322 511 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 CERKLQ49MI3 558 aaPredicted RBP5.01□□□□□ -1.61
VPS52-222ENST00000495981 TMEM179Q6ZVK1 233 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 APBB1IPQ7Z5R6 666 aaPredicted RBP5.01□□□□□ -1.61
VPS52-222ENST00000495981 AACSQ86V21 672 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 SIRT2Q8IXJ6 389 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 FAM126BQ8IXS8 530 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 ABRAQ8N0Z2 381 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 TMEM199Q8N511 208 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 CISD2Q8N5K1 135 aaKnown RBP5.01□□□□□ -1.61
VPS52-222ENST00000495981 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.01□□□□□ -1.61
VPS52-222ENST00000495981 ATOH1Q92858 354 aaPredicted RBP5.01□□□□□ -1.61
VPS52-222ENST00000495981 MAML3Q96JK9 1138 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 HEXIM2Q96MH2 286 aaKnown RBP5.01□□□□□ -1.61
VPS52-222ENST00000495981 IL1RAPL2Q9NP60 686 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 CABP5Q9NP86 173 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 DCP1AQ9NPI6 582 aaPredicted RBP5.01□□□□□ -1.61
VPS52-222ENST00000495981 STARD7Q9NQZ5 370 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 ADAMTS5Q9UNA0 930 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 ANKRD6Q9Y2G4 727 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 ZKSCAN5Q9Y2L8 839 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 ZNF281Q9Y2X9 895 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 SLC4A7Q9Y6M7 1214 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 MYO7AQ13402 2215 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 FAM208BQ5VWN6 2430 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 CYP2D7A0A087X1C5 515 aa5□□□□□ -1.61
VPS52-222ENST00000495981 TMEM221A6NGB7 291 aa5□□□□□ -1.61
VPS52-222ENST00000495981 M0R296 226 aa5□□□□□ -1.61
VPS52-222ENST00000495981 WDR46O15213 610 aaKnown RBP5□□□□□ -1.61
VPS52-222ENST00000495981 PRKAB2O43741 272 aa5□□□□□ -1.61
VPS52-222ENST00000495981 H2AFYO75367 372 aaKnown RBP5□□□□□ -1.61
VPS52-222ENST00000495981 SNUPNO95149 360 aaKnown RBP5□□□□□ -1.61
VPS52-222ENST00000495981 ZNF205O95201 554 aa5□□□□□ -1.61
VPS52-222ENST00000495981 MBD4O95243 580 aa5□□□□□ -1.61
VPS52-222ENST00000495981 PDGFBP01127 241 aaPredicted RBP5□□□□□ -1.61
VPS52-222ENST00000495981 LTFP02788 710 aa5□□□□□ -1.61
VPS52-222ENST00000495981 VAV1P15498 845 aa5□□□□□ -1.61
VPS52-222ENST00000495981 PAX3P23760 479 aa5□□□□□ -1.61
VPS52-222ENST00000495981 ADD2P35612 726 aa5□□□□□ -1.61
VPS52-222ENST00000495981 USP11P51784 963 aa5□□□□□ -1.61
VPS52-222ENST00000495981 NEK3P51956 506 aa5□□□□□ -1.61
VPS52-222ENST00000495981 TNK2Q07912 1038 aa5□□□□□ -1.61
VPS52-222ENST00000495981 LRRC32Q14392 662 aa5□□□□□ -1.61
VPS52-222ENST00000495981 TMEM132BQ14DG7 1078 aa5□□□□□ -1.61
VPS52-222ENST00000495981 KIZQ2M2Z5 673 aa5□□□□□ -1.61
VPS52-222ENST00000495981 HERC4Q5GLZ8 1057 aaPredicted RBP5□□□□□ -1.61
VPS52-222ENST00000495981 C10orf62Q5T681 223 aaPredicted RBP5□□□□□ -1.61
VPS52-222ENST00000495981 BROXQ5VW32 411 aa5□□□□□ -1.61
VPS52-222ENST00000495981 IL31Q6EBC2 164 aa5□□□□□ -1.61
VPS52-222ENST00000495981 B3GNT9Q6UX72 402 aa5□□□□□ -1.61
VPS52-222ENST00000495981 C22orf34Q6ZV56 151 aa5□□□□□ -1.61
VPS52-222ENST00000495981 BMP8AQ7Z5Y6 402 aa5□□□□□ -1.61
VPS52-222ENST00000495981 DPP9Q86TI2 863 aa5□□□□□ -1.61
VPS52-222ENST00000495981 ERC1Q8IUD2 1116 aa5□□□□□ -1.61
VPS52-222ENST00000495981 FTSJ3Q8IY81 847 aaKnown RBP5□□□□□ -1.61
VPS52-222ENST00000495981 SPICE1Q8N0Z3 855 aa5□□□□□ -1.61
VPS52-222ENST00000495981 EFHBQ8N7U6 833 aa5□□□□□ -1.61
VPS52-222ENST00000495981 MB21D1Q8N884 522 aa5□□□□□ -1.61
VPS52-222ENST00000495981 DAGLBQ8NCG7 672 aa5□□□□□ -1.61
VPS52-222ENST00000495981 PJA1Q8NG27 643 aa5□□□□□ -1.61
VPS52-222ENST00000495981 NEK9Q8TD19 979 aa5□□□□□ -1.61
VPS52-222ENST00000495981 PANK1Q8TE04 598 aa5□□□□□ -1.61
VPS52-222ENST00000495981 DIO2Q92813 273 aa5□□□□□ -1.61
VPS52-222ENST00000495981 DYNLL2Q96FJ2 89 aa5□□□□□ -1.61
VPS52-222ENST00000495981 ALG1Q9BT22 464 aa5□□□□□ -1.61
VPS52-222ENST00000495981 FSD1Q9BTV5 496 aa5□□□□□ -1.61
VPS52-222ENST00000495981 CRNKL1Q9BZJ0 848 aaKnown RBP5□□□□□ -1.61
VPS52-222ENST00000495981 TRPV6Q9H1D0 765 aa5□□□□□ -1.61
VPS52-222ENST00000495981 DUSP15Q9H1R2 295 aaPredicted RBP5□□□□□ -1.61
VPS52-222ENST00000495981 VCPKMTQ9H867 229 aa5□□□□□ -1.61
VPS52-222ENST00000495981 AKTIPQ9H8T0 292 aa5□□□□□ -1.61
VPS52-222ENST00000495981 ARMT1Q9H993 441 aa5□□□□□ -1.61
VPS52-222ENST00000495981 EPB41L4AQ9HCS5 686 aaPredicted RBP5□□□□□ -1.61
VPS52-222ENST00000495981 FBXO28Q9NVF7 368 aa5□□□□□ -1.61
VPS52-222ENST00000495981 MCM9Q9NXL9 1143 aa5□□□□□ -1.61
VPS52-222ENST00000495981 TAGLN3Q9UI15 199 aa5□□□□□ -1.61
VPS52-222ENST00000495981 TPX2Q9ULW0 747 aaKnown RBP5□□□□□ -1.61
VPS52-222ENST00000495981 GIT1Q9Y2X7 761 aa5□□□□□ -1.61
VPS52-222ENST00000495981 TMX2Q9Y320 296 aa5□□□□□ -1.61
VPS52-222ENST00000495981 FRYQ5TBA9 3013 aa4.99□□□□□ -1.61
VPS52-222ENST00000495981 ASTN1O14525 1302 aa4.99□□□□□ -1.61
VPS52-222ENST00000495981 SMCHD1A6NHR9 2005 aa4.99□□□□□ -1.61
VPS52-222ENST00000495981 ZNF561-AS1K7EIQ3 104 aa4.99□□□□□ -1.61
VPS52-222ENST00000495981 GOLIM4O00461 696 aa4.99□□□□□ -1.61
VPS52-222ENST00000495981 FLOT1O75955 427 aa4.99□□□□□ -1.61
VPS52-222ENST00000495981 CBX7O95931 251 aa4.99□□□□□ -1.61
VPS52-222ENST00000495981 PGK2P07205 417 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms