RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 SLC44A3Q8N4M1 653 aa7.85□□□□□ -1.15
VPS52-221ENST00000495755 APPL2Q8NEU8 664 aa7.85□□□□□ -1.15
VPS52-221ENST00000495755 RSAD2Q8WXG1 361 aa7.85□□□□□ -1.15
VPS52-221ENST00000495755 DDX12PQ92771 950 aa7.85□□□□□ -1.15
VPS52-221ENST00000495755 HVCN1Q96D96 273 aa7.85□□□□□ -1.15
VPS52-221ENST00000495755 KIF12Q96FN5 646 aa7.85□□□□□ -1.15
VPS52-221ENST00000495755 PRRX2Q99811 253 aa7.85□□□□□ -1.15
VPS52-221ENST00000495755 IKZF4Q9H2S9 585 aa7.85□□□□□ -1.15
VPS52-221ENST00000495755 RPF1Q9H9Y2 349 aaKnown RBP7.85□□□□□ -1.15
VPS52-221ENST00000495755 SEL1LQ9UBV2 794 aa7.85□□□□□ -1.15
VPS52-221ENST00000495755 FBXL5Q9UKA1 691 aa7.85□□□□□ -1.15
VPS52-221ENST00000495755 CDH7Q9ULB5 785 aa7.85□□□□□ -1.15
VPS52-221ENST00000495755 UBQLN1Q9UMX0 589 aaKnown RBP7.85□□□□□ -1.15
VPS52-221ENST00000495755 PCDHB8Q9UN66 801 aa7.85□□□□□ -1.15
VPS52-221ENST00000495755 DUSP12Q9UNI6 340 aa7.85□□□□□ -1.15
VPS52-221ENST00000495755 ZFP37Q9Y6Q3 630 aaPredicted RBP7.85□□□□□ -1.15
VPS52-221ENST00000495755 CITO14578 2027 aa7.85□□□□□ -1.15
VPS52-221ENST00000495755 WDR27A2RRH5 827 aa7.84□□□□□ -1.15
VPS52-221ENST00000495755 SPTLC2O15270 562 aa7.84□□□□□ -1.15
VPS52-221ENST00000495755 NARSO43776 548 aaKnown RBP7.84□□□□□ -1.15
VPS52-221ENST00000495755 PPP6R2O75170 966 aa7.84□□□□□ -1.15
VPS52-221ENST00000495755 OAZ2O95190 189 aa7.84□□□□□ -1.15
VPS52-221ENST00000495755 SEC24AO95486 1093 aa7.84□□□□□ -1.15
VPS52-221ENST00000495755 ATF2P15336 505 aa7.84□□□□□ -1.15
VPS52-221ENST00000495755 NPR3P17342 541 aa7.84□□□□□ -1.15
VPS52-221ENST00000495755 ADSSP30520 456 aa7.84□□□□□ -1.15
VPS52-221ENST00000495755 MCM4P33991 863 aa7.84□□□□□ -1.15
VPS52-221ENST00000495755 STAT6P42226 847 aa7.84□□□□□ -1.15
VPS52-221ENST00000495755 ACOT2P49753 483 aa7.84□□□□□ -1.15
VPS52-221ENST00000495755 GUCY2FP51841 1108 aa7.84□□□□□ -1.15
VPS52-221ENST00000495755 NUBP1P53384 320 aa7.84□□□□□ -1.15
VPS52-221ENST00000495755 POU5F1Q01860 360 aaKnown RBP7.84□□□□□ -1.15
VPS52-221ENST00000495755 KCNA1Q09470 495 aa7.84□□□□□ -1.15
VPS52-221ENST00000495755 TCF15Q12870 199 aa7.84□□□□□ -1.15
VPS52-221ENST00000495755 HTR4Q13639 388 aa7.84□□□□□ -1.15
VPS52-221ENST00000495755 STK38Q15208 465 aa7.84□□□□□ -1.15
VPS52-221ENST00000495755 CTXN3Q4LDR2 81 aa7.84□□□□□ -1.15
VPS52-221ENST00000495755 TPGS2Q68CL5 300 aa7.84□□□□□ -1.15
VPS52-221ENST00000495755 ADALQ6DHV7 355 aa7.84□□□□□ -1.15
VPS52-221ENST00000495755 JADE1Q6IE81 842 aa7.84□□□□□ -1.15
VPS52-221ENST00000495755 CRELD2Q6UXH1 353 aaPredicted RBP7.84□□□□□ -1.15
VPS52-221ENST00000495755 GET4Q7L5D6 327 aaPredicted RBP7.84□□□□□ -1.15
VPS52-221ENST00000495755 TCEAL8Q8IYN2 117 aa7.84□□□□□ -1.15
VPS52-221ENST00000495755 ITFG1Q8TB96 612 aa7.84□□□□□ -1.15
VPS52-221ENST00000495755 ZNF396Q96N95 335 aaPredicted RBP7.84□□□□□ -1.15
VPS52-221ENST00000495755 ASB7Q9H672 318 aa7.84□□□□□ -1.15
VPS52-221ENST00000495755 MRPL44Q9H9J2 332 aaKnown RBP7.84□□□□□ -1.15
VPS52-221ENST00000495755 AVENQ9NQS1 362 aaPredicted RBP7.84□□□□□ -1.15
VPS52-221ENST00000495755 OLFML3Q9NRN5 406 aa7.84□□□□□ -1.15
VPS52-221ENST00000495755 HCFC1R1Q9NWW0 138 aa7.84□□□□□ -1.15
VPS52-221ENST00000495755 TFIP11Q9UBB9 837 aaKnown RBP7.84□□□□□ -1.15
VPS52-221ENST00000495755 DNMT3BQ9UBC3 853 aaKnown RBP7.84□□□□□ -1.15
VPS52-221ENST00000495755 WNT16Q9UBV4 365 aa7.84□□□□□ -1.15
VPS52-221ENST00000495755 AGO2Q9UKV8 859 aaKnown RBP7.84□□□□□ -1.15
VPS52-221ENST00000495755 KCNH3Q9ULD8 1083 aa7.84□□□□□ -1.15
VPS52-221ENST00000495755 MAFFQ9ULX9 164 aa7.84□□□□□ -1.15
VPS52-221ENST00000495755 DERAQ9Y315 318 aa7.84□□□□□ -1.15
VPS52-221ENST00000495755 PDCD11Q14690 1871 aaKnown RBP7.83□□□□□ -1.16
VPS52-221ENST00000495755 ANO9A1A5B4 782 aa7.83□□□□□ -1.16
VPS52-221ENST00000495755 PIRO00625 290 aa7.83□□□□□ -1.16
VPS52-221ENST00000495755 PPEF2O14830 753 aa7.83□□□□□ -1.16
VPS52-221ENST00000495755 SPTLC1O15269 473 aa7.83□□□□□ -1.16
VPS52-221ENST00000495755 XPOTO43592 962 aaKnown RBP7.83□□□□□ -1.16
VPS52-221ENST00000495755 CUTAO60888 179 aa7.83□□□□□ -1.16
VPS52-221ENST00000495755 YEATS4O95619 227 aa7.83□□□□□ -1.16
VPS52-221ENST00000495755 NFICP08651 508 aa7.83□□□□□ -1.16
VPS52-221ENST00000495755 ZSCAN22P10073 491 aaPredicted RBP7.83□□□□□ -1.16
VPS52-221ENST00000495755 SRFP11831 508 aa7.83□□□□□ -1.16
VPS52-221ENST00000495755 PDIA4P13667 645 aaKnown RBP7.83□□□□□ -1.16
VPS52-221ENST00000495755 PAX3P23760 479 aa7.83□□□□□ -1.16
VPS52-221ENST00000495755 ELF1P32519 619 aa7.83□□□□□ -1.16
VPS52-221ENST00000495755 CLCN5P51795 746 aa7.83□□□□□ -1.16
VPS52-221ENST00000495755 CASP5P51878 434 aa7.83□□□□□ -1.16
VPS52-221ENST00000495755 PTPN5P54829 565 aa7.83□□□□□ -1.16
VPS52-221ENST00000495755 ARPP19P56211 112 aa7.83□□□□□ -1.16
VPS52-221ENST00000495755 LILRA4P59901 499 aa7.83□□□□□ -1.16
VPS52-221ENST00000495755 TMEM132DQ14C87 1099 aa7.83□□□□□ -1.16
VPS52-221ENST00000495755 POSTNQ15063 836 aa7.83□□□□□ -1.16
VPS52-221ENST00000495755 E2F4Q16254 413 aa7.83□□□□□ -1.16
VPS52-221ENST00000495755 PABPC1LQ4VXU2 614 aaKnown RBP7.83□□□□□ -1.16
VPS52-221ENST00000495755 L1TD1Q5T7N2 865 aaKnown RBP7.83□□□□□ -1.16
VPS52-221ENST00000495755 C9orf57Q5W0N0 161 aa7.83□□□□□ -1.16
VPS52-221ENST00000495755 ASTLQ6HA08 431 aaPredicted RBP7.83□□□□□ -1.16
VPS52-221ENST00000495755 ZNF280DQ6N043 979 aa7.83□□□□□ -1.16
VPS52-221ENST00000495755 POTEHQ6S545 545 aa7.83□□□□□ -1.16
VPS52-221ENST00000495755 SHC4Q6S5L8 630 aa7.83□□□□□ -1.16
VPS52-221ENST00000495755 PARM1Q6UWI2 310 aa7.83□□□□□ -1.16
VPS52-221ENST00000495755 RNF19BQ6ZMZ0 732 aa7.83□□□□□ -1.16
VPS52-221ENST00000495755 PDILTQ8N807 584 aa7.83□□□□□ -1.16
VPS52-221ENST00000495755 TMEM105Q8N8V8 129 aa7.83□□□□□ -1.16
VPS52-221ENST00000495755 BEST2Q8NFU1 509 aa7.83□□□□□ -1.16
VPS52-221ENST00000495755 FGF13Q92913 245 aa7.83□□□□□ -1.16
VPS52-221ENST00000495755 FAM212AQ96EL1 285 aa7.83□□□□□ -1.16
VPS52-221ENST00000495755 ACCSQ96QU6 501 aa7.83□□□□□ -1.16
VPS52-221ENST00000495755 RPP25Q9BUL9 199 aaKnown RBP7.83□□□□□ -1.16
VPS52-221ENST00000495755 OXCT2Q9BYC2 517 aaPredicted RBP7.83□□□□□ -1.16
VPS52-221ENST00000495755 CYP4F11Q9HBI6 524 aa7.83□□□□□ -1.16
VPS52-221ENST00000495755 PANK4Q9NVE7 773 aa7.83□□□□□ -1.16
VPS52-221ENST00000495755 KBTBD4Q9NVX7 518 aa7.83□□□□□ -1.16
VPS52-221ENST00000495755 TBC1D7Q9P0N9 293 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms