RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 OXER1Q8TDS5 423 aa14.78□□□□□ -0.04
COL1A1-209ENST00000495677 CSGALNACT1Q8TDX6 532 aa14.78□□□□□ -0.04
COL1A1-209ENST00000495677 TM6SF1Q9BZW5 370 aa14.78□□□□□ -0.04
COL1A1-209ENST00000495677 TUFT1Q9NNX1 390 aa14.78□□□□□ -0.04
COL1A1-209ENST00000495677 AFF4Q9UHB7 1163 aaKnown RBP14.78□□□□□ -0.04
COL1A1-209ENST00000495677 GDAQ9Y2T3 454 aa14.78□□□□□ -0.04
COL1A1-209ENST00000495677 HEPACAM2A8MVW5 462 aa14.77□□□□□ -0.05
COL1A1-209ENST00000495677 EDN1P05305 212 aa14.77□□□□□ -0.05
COL1A1-209ENST00000495677 PROS1P07225 676 aa14.77□□□□□ -0.05
COL1A1-209ENST00000495677 VIPR2P41587 438 aa14.77□□□□□ -0.05
COL1A1-209ENST00000495677 RAP1GAPP47736 663 aa14.77□□□□□ -0.05
COL1A1-209ENST00000495677 SRSF5Q13243 272 aaKnown RBP14.77□□□□□ -0.05
COL1A1-209ENST00000495677 PPP2R5AQ15172 486 aa14.77□□□□□ -0.05
COL1A1-209ENST00000495677 CALCRLQ16602 461 aa14.77□□□□□ -0.05
COL1A1-209ENST00000495677 MAEAQ7L5Y9 396 aa14.77□□□□□ -0.05
COL1A1-209ENST00000495677 APBB1IPQ7Z5R6 666 aaPredicted RBP14.77□□□□□ -0.05
COL1A1-209ENST00000495677 RALGPS2Q86X27 583 aaPredicted RBP14.77□□□□□ -0.05
COL1A1-209ENST00000495677 HS6ST3Q8IZP7 471 aa14.77□□□□□ -0.05
COL1A1-209ENST00000495677 BSNDQ8WZ55 320 aa14.77□□□□□ -0.05
COL1A1-209ENST00000495677 TNFRSF25Q93038 417 aa14.77□□□□□ -0.05
COL1A1-209ENST00000495677 MTMR9Q96QG7 549 aa14.77□□□□□ -0.05
COL1A1-209ENST00000495677 NACC1Q96RE7 527 aa14.77□□□□□ -0.05
COL1A1-209ENST00000495677 LSM14BQ9BX40 385 aaKnown RBP14.77□□□□□ -0.05
COL1A1-209ENST00000495677 GOLGA2P5Q9HBQ8 144 aa14.77□□□□□ -0.05
COL1A1-209ENST00000495677 SLC38A7Q9NVC3 462 aa14.77□□□□□ -0.05
COL1A1-209ENST00000495677 CEP72Q9P209 647 aa14.77□□□□□ -0.05
COL1A1-209ENST00000495677 FBXL5Q9UKA1 691 aa14.77□□□□□ -0.05
COL1A1-209ENST00000495677 ANK1P16157 1881 aa14.77□□□□□ -0.05
COL1A1-209ENST00000495677 LAMA1P25391 3075 aa14.77□□□□□ -0.05
COL1A1-209ENST00000495677 NCANO14594 1321 aa14.76□□□□□ -0.05
COL1A1-209ENST00000495677 I3L4J1 428 aa14.76□□□□□ -0.05
COL1A1-209ENST00000495677 CYP11B2P19099 503 aa14.76□□□□□ -0.05
COL1A1-209ENST00000495677 RPL9P32969 192 aaKnown RBP14.76□□□□□ -0.05
COL1A1-209ENST00000495677 EFNA5P52803 228 aa14.76□□□□□ -0.05
COL1A1-209ENST00000495677 SOX4Q06945 474 aaPredicted RBP14.76□□□□□ -0.05
COL1A1-209ENST00000495677 TMEM132AQ24JP5 1023 aa14.76□□□□□ -0.05
COL1A1-209ENST00000495677 AASDHQ4L235 1098 aaPredicted RBP14.76□□□□□ -0.05
COL1A1-209ENST00000495677 WDR44Q5JSH3 913 aa14.76□□□□□ -0.05
COL1A1-209ENST00000495677 GLRA4Q5JXX5 417 aa14.76□□□□□ -0.05
COL1A1-209ENST00000495677 PLA2G2CQ5R387 149 aa14.76□□□□□ -0.05
COL1A1-209ENST00000495677 CEP68Q76N32 757 aa14.76□□□□□ -0.05
COL1A1-209ENST00000495677 CATSPER3Q86XQ3 398 aa14.76□□□□□ -0.05
COL1A1-209ENST00000495677 LRRC3Q9BY71 257 aa14.76□□□□□ -0.05
COL1A1-209ENST00000495677 ASAH2Q9NR71 780 aa14.76□□□□□ -0.05
COL1A1-209ENST00000495677 TOPORSQ9NS56 1045 aaPredicted RBP14.76□□□□□ -0.05
COL1A1-209ENST00000495677 GJB4Q9NTQ9 266 aa14.76□□□□□ -0.05
COL1A1-209ENST00000495677 TNFSF13BQ9Y275 285 aa14.76□□□□□ -0.05
COL1A1-209ENST00000495677 PCDHGA5Q9Y5G8 931 aa14.76□□□□□ -0.05
COL1A1-209ENST00000495677 CYP46A1Q9Y6A2 500 aa14.76□□□□□ -0.05
COL1A1-209ENST00000495677 PCNX2A6NKB5 2137 aa14.75□□□□□ -0.05
COL1A1-209ENST00000495677 ATRXP46100 2492 aa14.75□□□□□ -0.05
COL1A1-209ENST00000495677 A0A087WWV3 80 aa14.75□□□□□ -0.05
COL1A1-209ENST00000495677 REC8O95072 547 aa14.75□□□□□ -0.05
COL1A1-209ENST00000495677 EPN2O95208 641 aa14.75□□□□□ -0.05
COL1A1-209ENST00000495677 KCNE1P15382 129 aa14.75□□□□□ -0.05
COL1A1-209ENST00000495677 CTHP32929 405 aa14.75□□□□□ -0.05
COL1A1-209ENST00000495677 GRM5P41594 1212 aa14.75□□□□□ -0.05
COL1A1-209ENST00000495677 TXKP42681 527 aa14.75□□□□□ -0.05
COL1A1-209ENST00000495677 SCRN1Q12765 414 aa14.75□□□□□ -0.05
COL1A1-209ENST00000495677 CCINQ13939 588 aa14.75□□□□□ -0.05
COL1A1-209ENST00000495677 NT5DC1Q5TFE4 455 aa14.75□□□□□ -0.05
COL1A1-209ENST00000495677 STPG1Q5TH74 334 aa14.75□□□□□ -0.05
COL1A1-209ENST00000495677 ATF7IP2Q5U623 682 aa14.75□□□□□ -0.05
COL1A1-209ENST00000495677 C12orf50Q8NA57 414 aaPredicted RBP14.75□□□□□ -0.05
COL1A1-209ENST00000495677 BEST2Q8NFU1 509 aa14.75□□□□□ -0.05
COL1A1-209ENST00000495677 DEPTORQ8TB45 409 aa14.75□□□□□ -0.05
COL1A1-209ENST00000495677 GAB3Q8WWW8 586 aa14.75□□□□□ -0.05
COL1A1-209ENST00000495677 ZC3H10Q96K80 434 aaKnown RBP14.75□□□□□ -0.05
COL1A1-209ENST00000495677 SUSD3Q96L08 255 aa14.75□□□□□ -0.05
COL1A1-209ENST00000495677 POLR3CQ9BUI4 534 aaPredicted RBP14.75□□□□□ -0.05
COL1A1-209ENST00000495677 ARRDC1-AS1Q9H2J1 176 aa14.75□□□□□ -0.05
COL1A1-209ENST00000495677 RBM12Q9NTZ6 932 aaKnown RBP14.75□□□□□ -0.05
COL1A1-209ENST00000495677 OBP2AQ9NY56 170 aa14.75□□□□□ -0.05
COL1A1-209ENST00000495677 USP20Q9Y2K6 914 aa14.75□□□□□ -0.05
COL1A1-209ENST00000495677 FRYQ5TBA9 3013 aa14.75□□□□□ -0.05
COL1A1-209ENST00000495677 MYO16Q9Y6X6 1858 aa14.74□□□□□ -0.05
COL1A1-209ENST00000495677 SPECC1L-ADORA2AF8WAN1 911 aa14.74□□□□□ -0.05
COL1A1-209ENST00000495677 PODXLO00592 558 aa14.74□□□□□ -0.05
COL1A1-209ENST00000495677 AXIN1O15169 862 aa14.74□□□□□ -0.05
COL1A1-209ENST00000495677 AKAP3O75969 853 aa14.74□□□□□ -0.05
COL1A1-209ENST00000495677 KCNK5O95279 499 aa14.74□□□□□ -0.05
COL1A1-209ENST00000495677 MUTP22033 750 aa14.74□□□□□ -0.05
COL1A1-209ENST00000495677 WEE1P30291 646 aa14.74□□□□□ -0.05
COL1A1-209ENST00000495677 KPNA1P52294 538 aaPredicted RBP14.74□□□□□ -0.05
COL1A1-209ENST00000495677 YARSP54577 528 aaKnown RBP14.74□□□□□ -0.05
COL1A1-209ENST00000495677 TWF1Q12792 350 aa14.74□□□□□ -0.05
COL1A1-209ENST00000495677 STK3Q13188 491 aa14.74□□□□□ -0.05
COL1A1-209ENST00000495677 NR5A1Q13285 461 aa14.74□□□□□ -0.05
COL1A1-209ENST00000495677 SF3A2Q15428 464 aaKnown RBP14.74□□□□□ -0.05
COL1A1-209ENST00000495677 TEAD2Q15562 447 aa14.74□□□□□ -0.05
COL1A1-209ENST00000495677 CTXN3Q4LDR2 81 aa14.74□□□□□ -0.05
COL1A1-209ENST00000495677 ARHGAP29Q52LW3 1261 aa14.74□□□□□ -0.05
COL1A1-209ENST00000495677 HEATR6Q6AI08 1181 aaKnown RBP14.74□□□□□ -0.05
COL1A1-209ENST00000495677 TXNDC11Q6PKC3 985 aa14.74□□□□□ -0.05
COL1A1-209ENST00000495677 CACNA2D4Q7Z3S7 1137 aa14.74□□□□□ -0.05
COL1A1-209ENST00000495677 YAF2Q8IY57 180 aa14.74□□□□□ -0.05
COL1A1-209ENST00000495677 APPL2Q8NEU8 664 aa14.74□□□□□ -0.05
COL1A1-209ENST00000495677 SHKBP1Q8TBC3 707 aa14.74□□□□□ -0.05
COL1A1-209ENST00000495677 CCDC94Q9BW85 323 aaPredicted RBP14.74□□□□□ -0.05
COL1A1-209ENST00000495677 OXCT2Q9BYC2 517 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms