RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 ARHGAP20Q9P2F6 1191 aa7.79□□□□□ -1.16
VIM-207ENST00000495528 ABCF2Q9UG63 623 aa7.79□□□□□ -1.16
VIM-207ENST00000495528 STAP2Q9UGK3 403 aa7.79□□□□□ -1.16
VIM-207ENST00000495528 FFAR3O14843 346 aa7.78□□□□□ -1.16
VIM-207ENST00000495528 DNAJC6O75061 913 aa7.78□□□□□ -1.16
VIM-207ENST00000495528 CT47B1P0C2W7 299 aaPredicted RBP7.78□□□□□ -1.16
VIM-207ENST00000495528 UBTFL1P0CB47 393 aaPredicted RBP7.78□□□□□ -1.16
VIM-207ENST00000495528 PTGS1P23219 599 aa7.78□□□□□ -1.16
VIM-207ENST00000495528 PTX3P26022 381 aaPredicted RBP7.78□□□□□ -1.16
VIM-207ENST00000495528 KPNA1P52294 538 aaPredicted RBP7.78□□□□□ -1.16
VIM-207ENST00000495528 TREML2Q5T2D2 321 aa7.78□□□□□ -1.16
VIM-207ENST00000495528 CREB3L3Q68CJ9 461 aa7.78□□□□□ -1.16
VIM-207ENST00000495528 CC2D1AQ6P1N0 951 aaPredicted RBP7.78□□□□□ -1.16
VIM-207ENST00000495528 DZIP1Q86YF9 867 aaKnown RBP7.78□□□□□ -1.16
VIM-207ENST00000495528 ZGPATQ8N5A5 531 aaKnown RBP7.78□□□□□ -1.16
VIM-207ENST00000495528 DTX3Q8N9I9 347 aa7.78□□□□□ -1.16
VIM-207ENST00000495528 SLC17A8Q8NDX2 589 aa7.78□□□□□ -1.16
VIM-207ENST00000495528 DIS3LQ8TF46 1054 aaKnown RBP7.78□□□□□ -1.16
VIM-207ENST00000495528 USP7Q93009 1102 aa7.78□□□□□ -1.16
VIM-207ENST00000495528 COA7Q96BR5 231 aa7.78□□□□□ -1.16
VIM-207ENST00000495528 TACO1Q9BSH4 297 aaKnown RBP7.78□□□□□ -1.16
VIM-207ENST00000495528 TOMM22Q9NS69 142 aa7.78□□□□□ -1.16
VIM-207ENST00000495528 ZFP69BQ9UJL9 534 aa7.78□□□□□ -1.16
VIM-207ENST00000495528 AGTPBP1Q9UPW5 1226 aa7.78□□□□□ -1.16
VIM-207ENST00000495528 RFX7Q2KHR2 1363 aa7.78□□□□□ -1.16
VIM-207ENST00000495528 GPR75-ASB3A0A0A6YYF3 556 aa7.77□□□□□ -1.17
VIM-207ENST00000495528 FBXO21O94952 628 aa7.77□□□□□ -1.17
VIM-207ENST00000495528 AOAHP28039 575 aa7.77□□□□□ -1.17
VIM-207ENST00000495528 RHBDL3P58872 404 aa7.77□□□□□ -1.17
VIM-207ENST00000495528 HERVK_113P62684 666 aa7.77□□□□□ -1.17
VIM-207ENST00000495528 MECOMQ03112 1051 aa7.77□□□□□ -1.17
VIM-207ENST00000495528 DLX2Q07687 328 aaPredicted RBP7.77□□□□□ -1.17
VIM-207ENST00000495528 SPP2Q13103 211 aa7.77□□□□□ -1.17
VIM-207ENST00000495528 RRP1BQ14684 758 aaKnown RBP7.77□□□□□ -1.17
VIM-207ENST00000495528 FAM110CQ1W6H9 321 aa7.77□□□□□ -1.17
VIM-207ENST00000495528 TMEM151BQ8IW70 566 aa7.77□□□□□ -1.17
VIM-207ENST00000495528 STPG3Q8N7X2 389 aa7.77□□□□□ -1.17
VIM-207ENST00000495528 ZSCAN18Q8TBC5 510 aaPredicted RBP7.77□□□□□ -1.17
VIM-207ENST00000495528 IGDCC4Q8TDY8 1250 aa7.77□□□□□ -1.17
VIM-207ENST00000495528 ZNF384Q8TF68 577 aa7.77□□□□□ -1.17
VIM-207ENST00000495528 FRAT1Q92837 279 aaPredicted RBP7.77□□□□□ -1.17
VIM-207ENST00000495528 FAM126AQ9BYI3 521 aaPredicted RBP7.77□□□□□ -1.17
VIM-207ENST00000495528 SMC4Q9NTJ3 1288 aa7.77□□□□□ -1.17
VIM-207ENST00000495528 SPTLC3Q9NUV7 552 aa7.77□□□□□ -1.17
VIM-207ENST00000495528 BTBD7Q9P203 1132 aa7.77□□□□□ -1.17
VIM-207ENST00000495528 GJD2Q9UKL4 321 aa7.77□□□□□ -1.17
VIM-207ENST00000495528 NOB1Q9ULX3 412 aaKnown RBP7.77□□□□□ -1.17
VIM-207ENST00000495528 RANBP2P49792 3224 aaKnown RBP7.76□□□□□ -1.17
VIM-207ENST00000495528 A0A1B0GUL7 405 aa7.76□□□□□ -1.17
VIM-207ENST00000495528 A0A1W2PPC1 479 aa7.76□□□□□ -1.17
VIM-207ENST00000495528 DDX3XO00571 662 aaKnown RBP eCLIP7.76□□□□□ -1.17
VIM-207ENST00000495528 FKBP9O95302 570 aa7.76□□□□□ -1.17
VIM-207ENST00000495528 CAPN2P17655 700 aa7.76□□□□□ -1.17
VIM-207ENST00000495528 SDHAP31040 664 aa7.76□□□□□ -1.17
VIM-207ENST00000495528 ADCYAP1R1P41586 468 aa7.76□□□□□ -1.17
VIM-207ENST00000495528 ID4P47928 161 aa7.76□□□□□ -1.17
VIM-207ENST00000495528 MLLT6P55198 1093 aaPredicted RBP7.76□□□□□ -1.17
VIM-207ENST00000495528 TFCP2Q12800 502 aa7.76□□□□□ -1.17
VIM-207ENST00000495528 ALDH1L2Q3SY69 923 aa7.76□□□□□ -1.17
VIM-207ENST00000495528 SPTY2D1Q68D10 685 aaPredicted RBP7.76□□□□□ -1.17
VIM-207ENST00000495528 FKBP9P1Q75LS8 142 aa7.76□□□□□ -1.17
VIM-207ENST00000495528 NECAB2Q7Z6G3 386 aa7.76□□□□□ -1.17
VIM-207ENST00000495528 GDF15Q99988 308 aa7.76□□□□□ -1.17
VIM-207ENST00000495528 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.76□□□□□ -1.17
VIM-207ENST00000495528 OSBPL5Q9H0X9 879 aaPredicted RBP7.76□□□□□ -1.17
VIM-207ENST00000495528 ACSS2Q9NR19 701 aa7.76□□□□□ -1.17
VIM-207ENST00000495528 AK9Q5TCS8 1911 aa7.76□□□□□ -1.17
VIM-207ENST00000495528 MROH7-TTC4A0A0A0MT08 1334 aa7.76□□□□□ -1.17
VIM-207ENST00000495528 IL18BPO95998 194 aa7.75□□□□□ -1.17
VIM-207ENST00000495528 HMGCRP04035 888 aa7.75□□□□□ -1.17
VIM-207ENST00000495528 GCLCP48506 637 aaPredicted RBP7.75□□□□□ -1.17
VIM-207ENST00000495528 HMGCS2P54868 508 aa7.75□□□□□ -1.17
VIM-207ENST00000495528 NFKB2Q00653 900 aa7.75□□□□□ -1.17
VIM-207ENST00000495528 TRMT10BQ6PF06 316 aaKnown RBP7.75□□□□□ -1.17
VIM-207ENST00000495528 LRSAM1Q6UWE0 723 aa7.75□□□□□ -1.17
VIM-207ENST00000495528 C1QL4Q86Z23 238 aa7.75□□□□□ -1.17
VIM-207ENST00000495528 NSUN4Q96CB9 384 aaKnown RBP7.75□□□□□ -1.17
VIM-207ENST00000495528 NEUROD6Q96NK8 337 aa7.75□□□□□ -1.17
VIM-207ENST00000495528 MEIS3Q99687 375 aa7.75□□□□□ -1.17
VIM-207ENST00000495528 INCENPQ9NQS7 918 aa7.75□□□□□ -1.17
VIM-207ENST00000495528 HMG20BQ9P0W2 317 aa7.75□□□□□ -1.17
VIM-207ENST00000495528 NTMQ9P121 344 aa7.75□□□□□ -1.17
VIM-207ENST00000495528 ZMYND8Q9ULU4 1186 aaPredicted RBP7.75□□□□□ -1.17
VIM-207ENST00000495528 SPO11Q9Y5K1 396 aa7.75□□□□□ -1.17
VIM-207ENST00000495528 PDS5AQ29RF7 1337 aaKnown RBP7.75□□□□□ -1.17
VIM-207ENST00000495528 RPTORQ8N122 1335 aa7.75□□□□□ -1.17
VIM-207ENST00000495528 NEMP1O14524 444 aa7.74□□□□□ -1.17
VIM-207ENST00000495528 LDHCP07864 332 aa7.74□□□□□ -1.17
VIM-207ENST00000495528 SYN1P17600 705 aa7.74□□□□□ -1.17
VIM-207ENST00000495528 CYP2B6P20813 491 aa7.74□□□□□ -1.17
VIM-207ENST00000495528 SARSP49591 514 aaKnown RBP7.74□□□□□ -1.17
VIM-207ENST00000495528 IRX6P78412 446 aaPredicted RBP7.74□□□□□ -1.17
VIM-207ENST00000495528 JAG1P78504 1218 aa7.74□□□□□ -1.17
VIM-207ENST00000495528 MVPQ14764 893 aaKnown RBP7.74□□□□□ -1.17
VIM-207ENST00000495528 DHCR24Q15392 516 aa7.74□□□□□ -1.17
VIM-207ENST00000495528 C11orf74Q86VG3 221 aa7.74□□□□□ -1.17
VIM-207ENST00000495528 LINC01356Q8N9X3 169 aa7.74□□□□□ -1.17
VIM-207ENST00000495528 SPATA5Q8NB90 893 aa7.74□□□□□ -1.17
VIM-207ENST00000495528 TP53I13Q8NBR0 393 aaPredicted RBP7.74□□□□□ -1.17
VIM-207ENST00000495528 TRIB2Q92519 343 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms