RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 ZNF280DQ6N043 979 aa24.1■■□□□ 1.45
HDDC3-203ENST00000494993 DDX12PQ92771 950 aa24.1■■□□□ 1.45
HDDC3-203ENST00000494993 CDK5RAP3Q96JB5 506 aa24.1■■□□□ 1.45
HDDC3-203ENST00000494993 BCO2Q9BYV7 579 aa24.1■■□□□ 1.45
HDDC3-203ENST00000494993 OSBPL6Q9BZF3 934 aa24.1■■□□□ 1.45
HDDC3-203ENST00000494993 PLA2G2FQ9BZM2 168 aa24.1■■□□□ 1.45
HDDC3-203ENST00000494993 TUBGCP4Q9UGJ1 667 aa24.1■■□□□ 1.45
HDDC3-203ENST00000494993 MTF2Q9Y483 593 aaPredicted RBP24.1■■□□□ 1.45
HDDC3-203ENST00000494993 DCHS1Q96JQ0 3298 aa24.1■■□□□ 1.45
HDDC3-203ENST00000494993 TICRRQ7Z2Z1 1910 aa24.1■■□□□ 1.45
HDDC3-203ENST00000494993 COL4A2P08572 1712 aa24.1■■□□□ 1.45
HDDC3-203ENST00000494993 CXCL8P10145 99 aa24.09■■□□□ 1.45
HDDC3-203ENST00000494993 TMEM119Q4V9L6 283 aa24.09■■□□□ 1.45
HDDC3-203ENST00000494993 ARL6IP4Q66PJ3 421 aaKnown RBP24.09■■□□□ 1.45
HDDC3-203ENST00000494993 APPL2Q8NEU8 664 aa24.09■■□□□ 1.45
HDDC3-203ENST00000494993 LTB4R2Q9NPC1 389 aa24.09■■□□□ 1.45
HDDC3-203ENST00000494993 LARSQ9P2J5 1176 aaKnown RBP24.09■■□□□ 1.45
HDDC3-203ENST00000494993 PCDHB8Q9UN66 801 aa24.09■■□□□ 1.45
HDDC3-203ENST00000494993 NPHP3-ACAD11A0A0J9YXS1 232 aa24.08■■□□□ 1.45
HDDC3-203ENST00000494993 FAM170BA6NMN3 283 aa24.08■■□□□ 1.45
HDDC3-203ENST00000494993 ZNF197O14709 1029 aa24.08■■□□□ 1.45
HDDC3-203ENST00000494993 MATR3P43243 847 aaKnown RBP eCLIP24.08■■□□□ 1.45
HDDC3-203ENST00000494993 NCKAP1LP55160 1127 aa24.08■■□□□ 1.45
HDDC3-203ENST00000494993 CACNB1Q02641 598 aaPredicted RBP24.08■■□□□ 1.45
HDDC3-203ENST00000494993 TANGO2Q6ICL3 276 aa24.08■■□□□ 1.45
HDDC3-203ENST00000494993 MAML2Q8IZL2 1156 aaPredicted RBP24.08■■□□□ 1.45
HDDC3-203ENST00000494993 ELSPBP1Q96BH3 223 aa24.08■■□□□ 1.45
HDDC3-203ENST00000494993 TCEAL4Q96EI5 215 aa24.08■■□□□ 1.45
HDDC3-203ENST00000494993 HAPLN2Q9GZV7 340 aa24.08■■□□□ 1.45
HDDC3-203ENST00000494993 PLEKHA5Q9HAU0 1116 aa24.08■■□□□ 1.45
HDDC3-203ENST00000494993 AFF4Q9UHB7 1163 aaKnown RBP24.08■■□□□ 1.45
HDDC3-203ENST00000494993 F5P12259 2224 aa24.08■■□□□ 1.45
HDDC3-203ENST00000494993 H0YCG3 227 aa24.07■■□□□ 1.44
HDDC3-203ENST00000494993 H3BQV1 296 aa24.07■■□□□ 1.44
HDDC3-203ENST00000494993 MICAL2O94851 1124 aa24.07■■□□□ 1.44
HDDC3-203ENST00000494993 CLTAP09496 248 aa24.07■■□□□ 1.44
HDDC3-203ENST00000494993 CD72P21854 359 aa24.07■■□□□ 1.44
HDDC3-203ENST00000494993 FCARP24071 287 aa24.07■■□□□ 1.44
HDDC3-203ENST00000494993 GJB2P29033 226 aa24.07■■□□□ 1.44
HDDC3-203ENST00000494993 MAGEA9P43362 315 aa24.07■■□□□ 1.44
HDDC3-203ENST00000494993 FOXK2Q01167 660 aa24.07■■□□□ 1.44
HDDC3-203ENST00000494993 ADCY1Q08828 1119 aa24.07■■□□□ 1.44
HDDC3-203ENST00000494993 ARSHQ5FYA8 562 aa24.07■■□□□ 1.44
HDDC3-203ENST00000494993 TPRG1Q6ZUI0 275 aa24.07■■□□□ 1.44
HDDC3-203ENST00000494993 PDZD4Q76G19 769 aaPredicted RBP24.07■■□□□ 1.44
HDDC3-203ENST00000494993 KCNN1Q92952 543 aa24.07■■□□□ 1.44
HDDC3-203ENST00000494993 BICD1Q96G01 975 aa24.07■■□□□ 1.44
HDDC3-203ENST00000494993 TMX3Q96JJ7 454 aa24.07■■□□□ 1.44
HDDC3-203ENST00000494993 SPATA6Q9NWH7 488 aaPredicted RBP24.07■■□□□ 1.44
HDDC3-203ENST00000494993 MAFFQ9ULX9 164 aa24.07■■□□□ 1.44
HDDC3-203ENST00000494993 TSC2P49815 1807 aa24.06■■□□□ 1.44
HDDC3-203ENST00000494993 TTC26A0AVF1 554 aa24.06■■□□□ 1.44
HDDC3-203ENST00000494993 LRPAP1P30533 357 aa24.06■■□□□ 1.44
HDDC3-203ENST00000494993 CCR2P41597 374 aa24.06■■□□□ 1.44
HDDC3-203ENST00000494993 ID4P47928 161 aa24.06■■□□□ 1.44
HDDC3-203ENST00000494993 SPAG1Q07617 926 aa24.06■■□□□ 1.44
HDDC3-203ENST00000494993 HAUS6Q7Z4H7 955 aa24.06■■□□□ 1.44
HDDC3-203ENST00000494993 ELMOD1Q8N336 334 aa24.06■■□□□ 1.44
HDDC3-203ENST00000494993 TMEM130Q8N3G9 435 aa24.06■■□□□ 1.44
HDDC3-203ENST00000494993 KIF12Q96FN5 646 aa24.06■■□□□ 1.44
HDDC3-203ENST00000494993 ODF2LQ9ULJ1 636 aa24.06■■□□□ 1.44
HDDC3-203ENST00000494993 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.06■■□□□ 1.44
HDDC3-203ENST00000494993 TCHHQ07283 1943 aa24.06■■□□□ 1.44
HDDC3-203ENST00000494993 M0QZQ0 153 aa24.05■■□□□ 1.44
HDDC3-203ENST00000494993 LAMTOR5O43504 91 aa24.05■■□□□ 1.44
HDDC3-203ENST00000494993 SLC26A4O43511 780 aa24.05■■□□□ 1.44
HDDC3-203ENST00000494993 CPB1P15086 417 aa24.05■■□□□ 1.44
HDDC3-203ENST00000494993 MARCKSP29966 332 aaPredicted RBP24.05■■□□□ 1.44
HDDC3-203ENST00000494993 TNFSF9P41273 254 aa24.05■■□□□ 1.44
HDDC3-203ENST00000494993 TWF1Q12792 350 aa24.05■■□□□ 1.44
HDDC3-203ENST00000494993 ZBTB41Q5SVQ8 909 aa24.05■■□□□ 1.44
HDDC3-203ENST00000494993 CYP4A22Q5TCH4 519 aa24.05■■□□□ 1.44
HDDC3-203ENST00000494993 IQCEQ6IPM2 695 aa24.05■■□□□ 1.44
HDDC3-203ENST00000494993 RNF19BQ6ZMZ0 732 aa24.05■■□□□ 1.44
HDDC3-203ENST00000494993 DNASE1L2Q92874 299 aa24.05■■□□□ 1.44
HDDC3-203ENST00000494993 AK8Q96MA6 479 aa24.05■■□□□ 1.44
HDDC3-203ENST00000494993 ZNF512Q96ME7 567 aaPredicted RBP24.05■■□□□ 1.44
HDDC3-203ENST00000494993 ZFP14Q9HCL3 533 aa24.05■■□□□ 1.44
HDDC3-203ENST00000494993 HEBP1Q9NRV9 189 aa24.05■■□□□ 1.44
HDDC3-203ENST00000494993 CEP72Q9P209 647 aa24.05■■□□□ 1.44
HDDC3-203ENST00000494993 FBXO4Q9UKT5 387 aa24.05■■□□□ 1.44
HDDC3-203ENST00000494993 UBQLN1Q9UMX0 589 aaKnown RBP24.05■■□□□ 1.44
HDDC3-203ENST00000494993 NRG2O14511 850 aaPredicted RBP24.04■■□□□ 1.44
HDDC3-203ENST00000494993 CYP3A5P20815 502 aa24.04■■□□□ 1.44
HDDC3-203ENST00000494993 TARSP26639 723 aaKnown RBP24.04■■□□□ 1.44
HDDC3-203ENST00000494993 LIG4P49917 911 aa24.04■■□□□ 1.44
HDDC3-203ENST00000494993 YWHAHQ04917 246 aaPredicted RBP24.04■■□□□ 1.44
HDDC3-203ENST00000494993 PPP2R3AQ06190 1150 aa24.04■■□□□ 1.44
HDDC3-203ENST00000494993 ZBTB6Q15916 424 aa24.04■■□□□ 1.44
HDDC3-203ENST00000494993 ZNF528Q3MIS6 628 aa24.04■■□□□ 1.44
HDDC3-203ENST00000494993 FAM78AQ5JUQ0 283 aa24.04■■□□□ 1.44
HDDC3-203ENST00000494993 HS6ST3Q8IZP7 471 aa24.04■■□□□ 1.44
HDDC3-203ENST00000494993 CLDN23Q96B33 292 aa24.04■■□□□ 1.44
HDDC3-203ENST00000494993 ASB16Q96NS5 453 aa24.04■■□□□ 1.44
HDDC3-203ENST00000494993 NELL2Q99435 816 aa24.04■■□□□ 1.44
HDDC3-203ENST00000494993 REEP2Q9BRK0 252 aa24.04■■□□□ 1.44
HDDC3-203ENST00000494993 SCN1AP35498 2009 aa24.04■■□□□ 1.44
HDDC3-203ENST00000494993 FRYLO94915 3013 aa24.04■■□□□ 1.44
HDDC3-203ENST00000494993 DMXL1Q9Y485 3027 aa24.04■■□□□ 1.44
HDDC3-203ENST00000494993 OAZ2O95190 189 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms