RNA–Protein interactions for RNA: ENST00000494891.5

NEPRO-222, Transcript of nucleolus and neural progenitor protein, human

TSL 4

Gene NEPRO, Length 547 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-222	ENST00000494891	ADAM12	O43184	909 aa		11.17	□□□□□ -0.62
NEPRO-222	ENST00000494891	LDHA	P00338	332 aa	Known RBP	11.17	□□□□□ -0.62
NEPRO-222	ENST00000494891	WEE2	P0C1S8	567 aa		11.17	□□□□□ -0.62
NEPRO-222	ENST00000494891	ATF2	P15336	505 aa		11.17	□□□□□ -0.62
NEPRO-222	ENST00000494891	MATR3	P43243	847 aa	Known RBP eCLIP	11.17	□□□□□ -0.62	3e-8	■■■■■ 29.8
NEPRO-222	ENST00000494891	EHHADH	Q08426	723 aa		11.17	□□□□□ -0.62
NEPRO-222	ENST00000494891	MTMR3	Q13615	1198 aa		11.17	□□□□□ -0.62
NEPRO-222	ENST00000494891	PKP1	Q13835	747 aa		11.17	□□□□□ -0.62
NEPRO-222	ENST00000494891	VARS2	Q5ST30	1063 aa	Known RBP	11.17	□□□□□ -0.62
NEPRO-222	ENST00000494891	ZBTB41	Q5SVQ8	909 aa		11.17	□□□□□ -0.62
NEPRO-222	ENST00000494891	LIN9	Q5TKA1	542 aa		11.17	□□□□□ -0.62
NEPRO-222	ENST00000494891	RESP18	Q5W5W9	173 aa		11.17	□□□□□ -0.62
NEPRO-222	ENST00000494891	TPGS2	Q68CL5	300 aa		11.17	□□□□□ -0.62
NEPRO-222	ENST00000494891	ADAL	Q6DHV7	355 aa		11.17	□□□□□ -0.62
NEPRO-222	ENST00000494891	CRELD2	Q6UXH1	353 aa	Predicted RBP	11.17	□□□□□ -0.62
NEPRO-222	ENST00000494891	CCDC65	Q8IXS2	484 aa		11.17	□□□□□ -0.62
NEPRO-222	ENST00000494891	FEZF2	Q8TBJ5	459 aa		11.17	□□□□□ -0.62
NEPRO-222	ENST00000494891	SMG7	Q92540	1137 aa	Known RBP	11.17	□□□□□ -0.62
NEPRO-222	ENST00000494891	KIF12	Q96FN5	646 aa		11.17	□□□□□ -0.62
NEPRO-222	ENST00000494891	MFSD14A	Q96MC6	490 aa		11.17	□□□□□ -0.62
NEPRO-222	ENST00000494891	C7orf25	Q9BPX7	421 aa		11.17	□□□□□ -0.62
NEPRO-222	ENST00000494891	AVEN	Q9NQS1	362 aa	Predicted RBP	11.17	□□□□□ -0.62
NEPRO-222	ENST00000494891	PANK4	Q9NVE7	773 aa		11.17	□□□□□ -0.62
NEPRO-222	ENST00000494891	TUBGCP4	Q9UGJ1	667 aa		11.17	□□□□□ -0.62
NEPRO-222	ENST00000494891	PCDHB8	Q9UN66	801 aa		11.17	□□□□□ -0.62
NEPRO-222	ENST00000494891	PCDHA7	Q9UN72	937 aa		11.17	□□□□□ -0.62
NEPRO-222	ENST00000494891	NUB1	Q9Y5A7	615 aa		11.17	□□□□□ -0.62
NEPRO-222	ENST00000494891	CDY1	Q9Y6F8	540 aa		11.17	□□□□□ -0.62
NEPRO-222	ENST00000494891	FAM86C2P	A6NEL3	165 aa		11.16	□□□□□ -0.62
NEPRO-222	ENST00000494891	TMEM221	A6NGB7	291 aa		11.16	□□□□□ -0.62
NEPRO-222	ENST00000494891	SPDYE4	A6NLX3	237 aa		11.16	□□□□□ -0.62
NEPRO-222	ENST00000494891		M0R296	226 aa		11.16	□□□□□ -0.62
NEPRO-222	ENST00000494891	PIR	O00625	290 aa		11.16	□□□□□ -0.62
NEPRO-222	ENST00000494891	EIF3D	O15371	548 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
NEPRO-222	ENST00000494891	N4BP1	O75113	896 aa	Known RBP	11.16	□□□□□ -0.62
NEPRO-222	ENST00000494891	XYLB	O75191	536 aa		11.16	□□□□□ -0.62
NEPRO-222	ENST00000494891	IL18RAP	O95256	599 aa		11.16	□□□□□ -0.62
NEPRO-222	ENST00000494891	C8A	P07357	584 aa		11.16	□□□□□ -0.62
NEPRO-222	ENST00000494891	SPATA31D3	P0C874	917 aa		11.16	□□□□□ -0.62
NEPRO-222	ENST00000494891	TYMP	P19971	482 aa		11.16	□□□□□ -0.62
NEPRO-222	ENST00000494891	CASP5	P51878	434 aa		11.16	□□□□□ -0.62
NEPRO-222	ENST00000494891	SNRPF	P62306	86 aa	Known RBP	11.16	□□□□□ -0.62
NEPRO-222	ENST00000494891	ROR1	Q01973	937 aa		11.16	□□□□□ -0.62
NEPRO-222	ENST00000494891	KCNA1	Q09470	495 aa		11.16	□□□□□ -0.62
NEPRO-222	ENST00000494891	ZNF280D	Q6N043	979 aa		11.16	□□□□□ -0.62
NEPRO-222	ENST00000494891	SPATA31D4	Q6ZUB0	917 aa		11.16	□□□□□ -0.62
NEPRO-222	ENST00000494891	HFE2	Q6ZVN8	426 aa		11.16	□□□□□ -0.62
NEPRO-222	ENST00000494891	STXBP4	Q6ZWJ1	553 aa		11.16	□□□□□ -0.62
NEPRO-222	ENST00000494891	TCEAL8	Q8IYN2	117 aa		11.16	□□□□□ -0.62
NEPRO-222	ENST00000494891	PDILT	Q8N807	584 aa		11.16	□□□□□ -0.62
NEPRO-222	ENST00000494891	BEST2	Q8NFU1	509 aa		11.16	□□□□□ -0.62
NEPRO-222	ENST00000494891	PANK2	Q9BZ23	570 aa		11.16	□□□□□ -0.62
NEPRO-222	ENST00000494891	TSHZ2	Q9NRE2	1034 aa		11.16	□□□□□ -0.62
NEPRO-222	ENST00000494891	FBXL5	Q9UKA1	691 aa		11.16	□□□□□ -0.62
NEPRO-222	ENST00000494891	KCNH3	Q9ULD8	1083 aa		11.16	□□□□□ -0.62
NEPRO-222	ENST00000494891	HCN4	Q9Y3Q4	1203 aa		11.16	□□□□□ -0.62
NEPRO-222	ENST00000494891	WDFY4	Q6ZS81	3184 aa		11.15	□□□□□ -0.62
NEPRO-222	ENST00000494891	NOTCH4	Q99466	2003 aa		11.15	□□□□□ -0.62
NEPRO-222	ENST00000494891	ZDBF2	Q9HCK1	2354 aa		11.15	□□□□□ -0.62
NEPRO-222	ENST00000494891	FAM237A	A0A1B0GTK4	181 aa		11.15	□□□□□ -0.62
NEPRO-222	ENST00000494891	PVALEF	A0A1B0GWK0	134 aa		11.15	□□□□□ -0.62
NEPRO-222	ENST00000494891	WDR27	A2RRH5	827 aa		11.15	□□□□□ -0.62
NEPRO-222	ENST00000494891	TISP43	B9A030	160 aa		11.15	□□□□□ -0.62
NEPRO-222	ENST00000494891		I3L4J1	428 aa		11.15	□□□□□ -0.62
NEPRO-222	ENST00000494891	MICAL2	O94851	1124 aa		11.15	□□□□□ -0.62
NEPRO-222	ENST00000494891	GCNT3	O95395	438 aa		11.15	□□□□□ -0.62
NEPRO-222	ENST00000494891	CYP11A1	P05108	521 aa		11.15	□□□□□ -0.62
NEPRO-222	ENST00000494891	IDE	P14735	1019 aa		11.15	□□□□□ -0.62
NEPRO-222	ENST00000494891	MCM4	P33991	863 aa		11.15	□□□□□ -0.62
NEPRO-222	ENST00000494891	ACOT2	P49753	483 aa		11.15	□□□□□ -0.62
NEPRO-222	ENST00000494891	NUBP1	P53384	320 aa		11.15	□□□□□ -0.62
NEPRO-222	ENST00000494891	LILRA4	P59901	499 aa		11.15	□□□□□ -0.62
NEPRO-222	ENST00000494891	DNM1	Q05193	864 aa	Known RBP	11.15	□□□□□ -0.62
NEPRO-222	ENST00000494891	TMEM132D	Q14C87	1099 aa		11.15	□□□□□ -0.62
NEPRO-222	ENST00000494891	PPM1L	Q5SGD2	360 aa		11.15	□□□□□ -0.62
NEPRO-222	ENST00000494891	JADE1	Q6IE81	842 aa		11.15	□□□□□ -0.62
NEPRO-222	ENST00000494891	EPM2AIP1	Q7L775	607 aa	Predicted RBP	11.15	□□□□□ -0.62
NEPRO-222	ENST00000494891	GLYCTK	Q8IVS8	523 aa		11.15	□□□□□ -0.62
NEPRO-222	ENST00000494891	BRSK2	Q8IWQ3	736 aa		11.15	□□□□□ -0.62
NEPRO-222	ENST00000494891	ZNF507	Q8TCN5	953 aa		11.15	□□□□□ -0.62
NEPRO-222	ENST00000494891	TMEM174	Q8WUU8	243 aa		11.15	□□□□□ -0.62
NEPRO-222	ENST00000494891	POMGNT1	Q8WZA1	660 aa		11.15	□□□□□ -0.62
NEPRO-222	ENST00000494891	FAM13B	Q9NYF5	915 aa		11.15	□□□□□ -0.62
NEPRO-222	ENST00000494891	HSFX1	Q9UBD0	423 aa		11.15	□□□□□ -0.62
NEPRO-222	ENST00000494891	LIMD1	Q9UGP4	676 aa		11.15	□□□□□ -0.62
NEPRO-222	ENST00000494891	AFF4	Q9UHB7	1163 aa	Known RBP	11.15	□□□□□ -0.62
NEPRO-222	ENST00000494891	ZDHHC9	Q9Y397	364 aa		11.15	□□□□□ -0.62
NEPRO-222	ENST00000494891	MUC6	Q6W4X9	2439 aa		11.15	□□□□□ -0.63
NEPRO-222	ENST00000494891	DOCK6	Q96HP0	2047 aa		11.14	□□□□□ -0.63
NEPRO-222	ENST00000494891	UBE4B	O95155	1302 aa		11.14	□□□□□ -0.63
NEPRO-222	ENST00000494891	OR6C75	A6NL08	312 aa		11.14	□□□□□ -0.63
NEPRO-222	ENST00000494891	ANHX	E9PGG2	379 aa		11.14	□□□□□ -0.63
NEPRO-222	ENST00000494891	POLR2D	O15514	142 aa	Known RBP	11.14	□□□□□ -0.63
NEPRO-222	ENST00000494891	MYL1	P05976	194 aa		11.14	□□□□□ -0.63
NEPRO-222	ENST00000494891	NFIC	P08651	508 aa		11.14	□□□□□ -0.63
NEPRO-222	ENST00000494891	MYB	P10242	640 aa		11.14	□□□□□ -0.63
NEPRO-222	ENST00000494891	LAMP2	P13473	410 aa		11.14	□□□□□ -0.63
NEPRO-222	ENST00000494891	CMA1	P23946	247 aa		11.14	□□□□□ -0.63
NEPRO-222	ENST00000494891	ME1	P48163	572 aa		11.14	□□□□□ -0.63
NEPRO-222	ENST00000494891	YWHAH	Q04917	246 aa	Predicted RBP	11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms