RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 PTPN5P54829 565 aa10.45□□□□□ -0.74
MSH5-218ENST00000494646 GTF2BQ00403 316 aa10.45□□□□□ -0.74
MSH5-218ENST00000494646 ROR1Q01973 937 aa10.45□□□□□ -0.74
MSH5-218ENST00000494646 MRPL58Q14197 206 aaKnown RBP10.45□□□□□ -0.74
MSH5-218ENST00000494646 ENOX2Q16206 610 aaKnown RBP10.45□□□□□ -0.74
MSH5-218ENST00000494646 SLC39A4Q6P5W5 647 aa10.45□□□□□ -0.74
MSH5-218ENST00000494646 SV2BQ7L1I2 683 aa10.45□□□□□ -0.74
MSH5-218ENST00000494646 SIX5Q8N196 739 aa10.45□□□□□ -0.74
MSH5-218ENST00000494646 KRI1Q8N9T8 703 aaKnown RBP10.45□□□□□ -0.74
MSH5-218ENST00000494646 ZNF461Q8TAF7 563 aa10.45□□□□□ -0.74
MSH5-218ENST00000494646 DDX12PQ92771 950 aa10.45□□□□□ -0.74
MSH5-218ENST00000494646 INTS4Q96HW7 963 aaKnown RBP10.45□□□□□ -0.74
MSH5-218ENST00000494646 FIZ1Q96SL8 496 aa10.45□□□□□ -0.74
MSH5-218ENST00000494646 MSTO1Q9BUK6 570 aa10.45□□□□□ -0.74
MSH5-218ENST00000494646 RPF1Q9H9Y2 349 aaKnown RBP10.45□□□□□ -0.74
MSH5-218ENST00000494646 PLEKHA5Q9HAU0 1116 aa10.45□□□□□ -0.74
MSH5-218ENST00000494646 CYP4F11Q9HBI6 524 aa10.45□□□□□ -0.74
MSH5-218ENST00000494646 TBC1D7Q9P0N9 293 aa10.45□□□□□ -0.74
MSH5-218ENST00000494646 DNMT3BQ9UBC3 853 aaKnown RBP10.45□□□□□ -0.74
MSH5-218ENST00000494646 FBXL5Q9UKA1 691 aa10.45□□□□□ -0.74
MSH5-218ENST00000494646 CA14Q9ULX7 337 aa10.45□□□□□ -0.74
MSH5-218ENST00000494646 DUSP12Q9UNI6 340 aa10.45□□□□□ -0.74
MSH5-218ENST00000494646 PRRG1O14668 218 aa10.44□□□□□ -0.74
MSH5-218ENST00000494646 PPEF2O14830 753 aa10.44□□□□□ -0.74
MSH5-218ENST00000494646 SYN3O14994 580 aa10.44□□□□□ -0.74
MSH5-218ENST00000494646 OGTO15294 1046 aa10.44□□□□□ -0.74
MSH5-218ENST00000494646 STX6O43752 255 aa10.44□□□□□ -0.74
MSH5-218ENST00000494646 TBC1D4O60343 1298 aa10.44□□□□□ -0.74
MSH5-218ENST00000494646 ABLIM3O94929 683 aa10.44□□□□□ -0.74
MSH5-218ENST00000494646 NPR3P17342 541 aa10.44□□□□□ -0.74
MSH5-218ENST00000494646 PPP2R3AQ06190 1150 aa10.44□□□□□ -0.74
MSH5-218ENST00000494646 ZBTB6Q15916 424 aa10.44□□□□□ -0.74
MSH5-218ENST00000494646 FOXD4L6Q3SYB3 417 aaPredicted RBP10.44□□□□□ -0.74
MSH5-218ENST00000494646 CTXN3Q4LDR2 81 aa10.44□□□□□ -0.74
MSH5-218ENST00000494646 ADALQ6DHV7 355 aa10.44□□□□□ -0.74
MSH5-218ENST00000494646 ASTLQ6HA08 431 aaPredicted RBP10.44□□□□□ -0.74
MSH5-218ENST00000494646 PARM1Q6UWI2 310 aa10.44□□□□□ -0.74
MSH5-218ENST00000494646 FOXD4L3Q6VB84 417 aaPredicted RBP10.44□□□□□ -0.74
MSH5-218ENST00000494646 DSTYKQ6XUX3 929 aa10.44□□□□□ -0.74
MSH5-218ENST00000494646 ZNF720Q7Z2F6 126 aa10.44□□□□□ -0.74
MSH5-218ENST00000494646 PDILTQ8N807 584 aa10.44□□□□□ -0.74
MSH5-218ENST00000494646 GPR152Q8TDT2 470 aa10.44□□□□□ -0.74
MSH5-218ENST00000494646 ING5Q8WYH8 240 aa10.44□□□□□ -0.74
MSH5-218ENST00000494646 ATOH1Q92858 354 aaPredicted RBP10.44□□□□□ -0.74
MSH5-218ENST00000494646 FGF13Q92913 245 aa10.44□□□□□ -0.74
MSH5-218ENST00000494646 FGF14Q92915 247 aa10.44□□□□□ -0.74
MSH5-218ENST00000494646 MCRS1Q96EZ8 462 aa10.44□□□□□ -0.74
MSH5-218ENST00000494646 SUSD3Q96L08 255 aa10.44□□□□□ -0.74
MSH5-218ENST00000494646 PRRX2Q99811 253 aa10.44□□□□□ -0.74
MSH5-218ENST00000494646 CDH7Q9ULB5 785 aa10.44□□□□□ -0.74
MSH5-218ENST00000494646 UBQLN1Q9UMX0 589 aaKnown RBP10.44□□□□□ -0.74
MSH5-218ENST00000494646 NUMBLQ9Y6R0 609 aa10.44□□□□□ -0.74
MSH5-218ENST00000494646 VPS13AQ96RL7 3174 aa10.44□□□□□ -0.74
MSH5-218ENST00000494646 A0A087X0B3 334 aa10.43□□□□□ -0.74
MSH5-218ENST00000494646 A0A0B4J269 797 aa10.43□□□□□ -0.74
MSH5-218ENST00000494646 KRBA1A5PL33 1030 aa10.43□□□□□ -0.74
MSH5-218ENST00000494646 FAM189A1O60320 539 aa10.43□□□□□ -0.74
MSH5-218ENST00000494646 PIGRP01833 764 aa10.43□□□□□ -0.74
MSH5-218ENST00000494646 LRG1P02750 347 aa10.43□□□□□ -0.74
MSH5-218ENST00000494646 IDEP14735 1019 aa10.43□□□□□ -0.74
MSH5-218ENST00000494646 PTPN2P17706 415 aa10.43□□□□□ -0.74
MSH5-218ENST00000494646 LRPAP1P30533 357 aa10.43□□□□□ -0.74
MSH5-218ENST00000494646 HOXA9P31269 272 aa10.43□□□□□ -0.74
MSH5-218ENST00000494646 TXLNAP40222 546 aa10.43□□□□□ -0.74
MSH5-218ENST00000494646 CLCN5P51795 746 aa10.43□□□□□ -0.74
MSH5-218ENST00000494646 CDR1P51861 262 aa10.43□□□□□ -0.74
MSH5-218ENST00000494646 ADCY1Q08828 1119 aa10.43□□□□□ -0.74
MSH5-218ENST00000494646 KCNA1Q09470 495 aa10.43□□□□□ -0.74
MSH5-218ENST00000494646 SLC39A14Q15043 492 aa10.43□□□□□ -0.74
MSH5-218ENST00000494646 STK38Q15208 465 aa10.43□□□□□ -0.74
MSH5-218ENST00000494646 KYAT1Q16773 422 aa10.43□□□□□ -0.74
MSH5-218ENST00000494646 PABPC1LQ4VXU2 614 aaKnown RBP10.43□□□□□ -0.74
MSH5-218ENST00000494646 JADE1Q6IE81 842 aa10.43□□□□□ -0.74
MSH5-218ENST00000494646 SLC8B1Q6J4K2 584 aa10.43□□□□□ -0.74
MSH5-218ENST00000494646 POTEHQ6S545 545 aa10.43□□□□□ -0.74
MSH5-218ENST00000494646 RNF19BQ6ZMZ0 732 aa10.43□□□□□ -0.74
MSH5-218ENST00000494646 SFR1Q86XK3 245 aa10.43□□□□□ -0.74
MSH5-218ENST00000494646 APPL2Q8NEU8 664 aa10.43□□□□□ -0.74
MSH5-218ENST00000494646 NXPE3Q969Y0 559 aa10.43□□□□□ -0.74
MSH5-218ENST00000494646 DNAJC19Q96DA6 116 aa10.43□□□□□ -0.74
MSH5-218ENST00000494646 CORO1BQ9BR76 489 aa10.43□□□□□ -0.74
MSH5-218ENST00000494646 ZSCAN16Q9H4T2 348 aaPredicted RBP10.43□□□□□ -0.74
MSH5-218ENST00000494646 MRPL44Q9H9J2 332 aaKnown RBP10.43□□□□□ -0.74
MSH5-218ENST00000494646 CPSF3Q9UKF6 684 aaKnown RBP10.43□□□□□ -0.74
MSH5-218ENST00000494646 PCDHB8Q9UN66 801 aa10.43□□□□□ -0.74
MSH5-218ENST00000494646 MRPS23Q9Y3D9 190 aaKnown RBP10.43□□□□□ -0.74
MSH5-218ENST00000494646 ANHXE9PGG2 379 aa10.42□□□□□ -0.74
MSH5-218ENST00000494646 XPOTO43592 962 aaKnown RBP10.42□□□□□ -0.74
MSH5-218ENST00000494646 GALR2O43603 387 aaPredicted RBP10.42□□□□□ -0.74
MSH5-218ENST00000494646 ADRB2P07550 413 aa10.42□□□□□ -0.74
MSH5-218ENST00000494646 OR4Q2P0C623 313 aa10.42□□□□□ -0.74
MSH5-218ENST00000494646 SRFP11831 508 aa10.42□□□□□ -0.74
MSH5-218ENST00000494646 CPB1P15086 417 aa10.42□□□□□ -0.74
MSH5-218ENST00000494646 ATF2P15336 505 aa10.42□□□□□ -0.74
MSH5-218ENST00000494646 CYP3A5P20815 502 aa10.42□□□□□ -0.74
MSH5-218ENST00000494646 RFX1P22670 979 aa10.42□□□□□ -0.74
MSH5-218ENST00000494646 STAT6P42226 847 aa10.42□□□□□ -0.74
MSH5-218ENST00000494646 GPC5P78333 572 aa10.42□□□□□ -0.74
MSH5-218ENST00000494646 HTR4Q13639 388 aa10.42□□□□□ -0.74
MSH5-218ENST00000494646 SLC5A9Q2M3M2 681 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms