RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 ANKRD62A6NC57 917 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 MOXD2PA6NHM9 499 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 ZNF623O75123 536 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 RTN2O75298 545 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 CHRNA1P02708 482 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 CYP1A2P05177 515 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 H2AFZP0C0S5 128 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 FAM163BP0C2L3 166 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 CXCL8P10145 99 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 ELNP15502 786 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 CYP3A5P20815 502 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 CDH5P33151 784 aaPredicted RBP7.29□□□□□ -1.24
MSH5-217ENST00000494458 ASPAP45381 313 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 CDK7P50613 346 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 GALCP54803 685 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 MYL6P60660 151 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 TUBB4BP68371 445 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 MRPS6P82932 125 aaKnown RBP7.29□□□□□ -1.24
MSH5-217ENST00000494458 ARID5AQ03989 594 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 ITIH3Q06033 890 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 PTK7Q13308 1070 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 DSC3Q14574 896 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 ARHGAP44Q17R89 818 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 LMBRD2Q68DH5 695 aaPredicted RBP7.29□□□□□ -1.24
MSH5-217ENST00000494458 TRAF7Q6Q0C0 670 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 PAXIP1Q6ZW49 1069 aaPredicted RBP7.29□□□□□ -1.24
MSH5-217ENST00000494458 H2AFVQ71UI9 128 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 MRPL10Q7Z7H8 261 aaKnown RBP7.29□□□□□ -1.24
MSH5-217ENST00000494458 KIAA1328Q86T90 577 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 SLC47A2Q86VL8 602 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 FAM228AQ86W67 206 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 GLYCTKQ8IVS8 523 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 SMG8Q8ND04 991 aaKnown RBP7.29□□□□□ -1.24
MSH5-217ENST00000494458 SLC20A1Q8WUM9 679 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 ZNF296Q8WUU4 475 aaPredicted RBP7.29□□□□□ -1.24
MSH5-217ENST00000494458 SECISBP2LQ93073 1101 aaKnown RBP7.29□□□□□ -1.24
MSH5-217ENST00000494458 WNT8BQ93098 351 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 CPB2Q96IY4 423 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 VCPIP1Q96JH7 1222 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 ZNF668Q96K58 619 aaPredicted RBP7.29□□□□□ -1.24
MSH5-217ENST00000494458 FAM84AQ96KN4 292 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 SNX27Q96L92 541 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 OSMRQ99650 979 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 NAPGQ99747 312 aaPredicted RBP7.29□□□□□ -1.24
MSH5-217ENST00000494458 ADPGKQ9BRR6 497 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 TLR10Q9BXR5 811 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 MTMR12Q9C0I1 747 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 NIF3L1Q9GZT8 377 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 CYP3A43Q9HB55 503 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 C1orf112Q9NSG2 853 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 ITGA11Q9UKX5 1188 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 STXBP5LQ9Y2K9 1186 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 CAPN6Q9Y6Q1 641 aa7.29□□□□□ -1.24
MSH5-217ENST00000494458 UMODL1Q5DID0 1318 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 GRID2IPA4D2P6 1211 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 PIRO00625 290 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 CES2O00748 559 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 DYNC1I1O14576 645 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 INPPL1O15357 1258 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 TACC1O75410 805 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 ERLIN2O94905 339 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 SLU7O95391 586 aaKnown RBP7.28□□□□□ -1.24
MSH5-217ENST00000494458 NFICP08651 508 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 TNFAIP3P21580 790 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 YY1P25490 414 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 PIK3CAP42336 1068 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 MATR3P43243 847 aaKnown RBP eCLIP7.28□□□□□ -1.24
MSH5-217ENST00000494458 ACLYP53396 1101 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 CENPCQ03188 943 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 NCBP1Q09161 790 aaKnown RBP7.28□□□□□ -1.24
MSH5-217ENST00000494458 INCA1Q0VD86 236 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 WHAMMP3Q1A5X7 153 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 CLEC16AQ2KHT3 1053 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 MEI1Q5TIA1 1274 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 JADE1Q6IE81 842 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 SPOPLQ6IQ16 392 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 ACAD10Q6JQN1 1059 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 PPP1R2P3Q6NXS1 205 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 TRIM72Q6ZMU5 477 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 RSRC2Q7L4I2 434 aaKnown RBP7.28□□□□□ -1.24
MSH5-217ENST00000494458 CATSPER4Q7RTX7 472 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 RNF180Q86T96 592 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 CDR2LQ86X02 465 aaPredicted RBP7.28□□□□□ -1.24
MSH5-217ENST00000494458 RPUSD2Q8IZ73 545 aaKnown RBP7.28□□□□□ -1.24
MSH5-217ENST00000494458 LRRC52Q8N7C0 313 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 TPCN2Q8NHX9 752 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 WHAMMQ8TF30 809 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 RFFLQ8WZ73 363 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 ANKRD36BP1Q96IX9 119 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 ZMAT2Q96NC0 199 aaKnown RBP7.28□□□□□ -1.24
MSH5-217ENST00000494458 NOX5Q96PH1 765 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 ARID3AQ99856 593 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 EIF2AQ9BY44 585 aaKnown RBP7.28□□□□□ -1.24
MSH5-217ENST00000494458 FAM49AQ9H0Q0 323 aaPredicted RBP7.28□□□□□ -1.24
MSH5-217ENST00000494458 ERVK-5Q9HDB9 667 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 AVENQ9NQS1 362 aaPredicted RBP7.28□□□□□ -1.24
MSH5-217ENST00000494458 PAK6Q9NQU5 681 aaPredicted RBP7.28□□□□□ -1.24
MSH5-217ENST00000494458 TAS2R14Q9NYV8 317 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 PCDHGC3Q9UN70 934 aa7.28□□□□□ -1.24
MSH5-217ENST00000494458 PHF24Q9UPV7 400 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms