RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 CITO14578 2027 aa8.89□□□□□ -0.99
HDAC6-234ENST00000493923 NPHP3-ACAD11A0A0J9YXS1 232 aa8.89□□□□□ -0.99
HDAC6-234ENST00000493923 TTC36A6NLP5 189 aa8.89□□□□□ -0.99
HDAC6-234ENST00000493923 SFI1A8K8P3 1242 aa8.89□□□□□ -0.99
HDAC6-234ENST00000493923 I3L4J1 428 aa8.89□□□□□ -0.99
HDAC6-234ENST00000493923 ACKR2O00590 384 aa8.89□□□□□ -0.99
HDAC6-234ENST00000493923 ABLIM1O14639 778 aa8.89□□□□□ -0.99
HDAC6-234ENST00000493923 NARSO43776 548 aaKnown RBP8.89□□□□□ -0.99
HDAC6-234ENST00000493923 ERLIN1O75477 346 aa8.89□□□□□ -0.99
HDAC6-234ENST00000493923 URODP06132 367 aa8.89□□□□□ -0.99
HDAC6-234ENST00000493923 GLUD2P49448 558 aa8.89□□□□□ -0.99
HDAC6-234ENST00000493923 SOX4Q06945 474 aaPredicted RBP8.89□□□□□ -0.99
HDAC6-234ENST00000493923 GRIK3Q13003 919 aa8.89□□□□□ -0.99
HDAC6-234ENST00000493923 PRPF4BQ13523 1007 aaKnown RBP8.89□□□□□ -0.99
HDAC6-234ENST00000493923 GLRA4Q5JXX5 417 aa8.89□□□□□ -0.99
HDAC6-234ENST00000493923 ATAT1Q5SQI0 421 aa8.89□□□□□ -0.99
HDAC6-234ENST00000493923 LILRA6Q6PI73 481 aa8.89□□□□□ -0.99
HDAC6-234ENST00000493923 ZDHHC14Q8IZN3 488 aa8.89□□□□□ -0.99
HDAC6-234ENST00000493923 TDRD5Q8NAT2 981 aaKnown RBP8.89□□□□□ -0.99
HDAC6-234ENST00000493923 C3orf58Q8NDZ4 430 aa8.89□□□□□ -0.99
HDAC6-234ENST00000493923 GIMAP7Q8NHV1 300 aa8.89□□□□□ -0.99
HDAC6-234ENST00000493923 SNX29Q8TEQ0 813 aa8.89□□□□□ -0.99
HDAC6-234ENST00000493923 CACTINQ8WUQ7 758 aaKnown RBP8.89□□□□□ -0.99
HDAC6-234ENST00000493923 RIN2Q8WYP3 895 aaPredicted RBP8.89□□□□□ -0.99
HDAC6-234ENST00000493923 RSPH1Q8WYR4 309 aa8.89□□□□□ -0.99
HDAC6-234ENST00000493923 ZBTB9Q96C00 473 aa8.89□□□□□ -0.99
HDAC6-234ENST00000493923 ZBTB45Q96K62 511 aaPredicted RBP8.89□□□□□ -0.99
HDAC6-234ENST00000493923 MFSD14AQ96MC6 490 aa8.89□□□□□ -0.99
HDAC6-234ENST00000493923 RIPOR3Q96MK2 946 aa8.89□□□□□ -0.99
HDAC6-234ENST00000493923 NECTIN4Q96NY8 510 aa8.89□□□□□ -0.99
HDAC6-234ENST00000493923 PLIN2Q99541 437 aa8.89□□□□□ -0.99
HDAC6-234ENST00000493923 EMILIN2Q9BXX0 1053 aa8.89□□□□□ -0.99
HDAC6-234ENST00000493923 TRIM6Q9C030 488 aaPredicted RBP8.89□□□□□ -0.99
HDAC6-234ENST00000493923 TNMDQ9H2S6 317 aa8.89□□□□□ -0.99
HDAC6-234ENST00000493923 SFXN1Q9H9B4 322 aa8.89□□□□□ -0.99
HDAC6-234ENST00000493923 UBN1Q9NPG3 1134 aa8.89□□□□□ -0.99
HDAC6-234ENST00000493923 ST7Q9NRC1 585 aa8.89□□□□□ -0.99
HDAC6-234ENST00000493923 SH2B1Q9NRF2 756 aaPredicted RBP8.89□□□□□ -0.99
HDAC6-234ENST00000493923 ADAM28Q9UKQ2 775 aa8.89□□□□□ -0.99
HDAC6-234ENST00000493923 ATXN2Q99700 1313 aaKnown RBP8.88□□□□□ -0.99
HDAC6-234ENST00000493923 PDCD11Q14690 1871 aaKnown RBP8.88□□□□□ -0.99
HDAC6-234ENST00000493923 CCDC195A0A1B0GUA6 201 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 NRG2O14511 850 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-234ENST00000493923 N4BP3O15049 544 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 AP5Z1O43299 807 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 TGM5O43548 720 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 STX6O43752 255 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 HIP1RO75146 1068 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 AVPR2P30518 371 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 NAMPTP43490 491 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 NPTX2P47972 431 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 TRAPPC10P48553 1259 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 KRT85P78386 507 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 NTHL1P78549 312 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 GRIN1Q05586 938 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 ORC2Q13416 577 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-234ENST00000493923 TUSC3Q13454 348 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 TUBB2AQ13885 445 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 GIT2Q14161 759 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 NAA30Q147X3 362 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-234ENST00000493923 PCBP1Q15365 356 aaKnown RBP eCLIP8.88□□□□□ -0.99
HDAC6-234ENST00000493923 ERCC6LQ2NKX8 1250 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 C11orf91Q3C1V1 193 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 DNAJC21Q5F1R6 531 aaKnown RBP8.88□□□□□ -0.99
HDAC6-234ENST00000493923 RINT1Q6NUQ1 792 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 C1orf186Q6ZWK4 172 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 ZBTB33Q86T24 672 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 ZBTB8OSQ8IWT0 167 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 TMEM105Q8N8V8 129 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 ERMNQ8TAM6 284 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 DEPTORQ8TB45 409 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 ERCC4Q92889 916 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-234ENST00000493923 ZMAT2Q96NC0 199 aaKnown RBP8.88□□□□□ -0.99
HDAC6-234ENST00000493923 PPP1R10Q96QC0 940 aaKnown RBP8.88□□□□□ -0.99
HDAC6-234ENST00000493923 CLSTN3Q9BQT9 956 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 TUBB2BQ9BVA1 445 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 TARS2Q9BW92 718 aaKnown RBP8.88□□□□□ -0.99
HDAC6-234ENST00000493923 COLEC11Q9BWP8 271 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 HAPLN2Q9GZV7 340 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 CDT1Q9H211 546 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 CBX8Q9HC52 389 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 ADAM21Q9UKJ8 722 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 SORCS3Q9UPU3 1222 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 NR2E1Q9Y466 385 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 GPR179Q6PRD1 2367 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 CACNA1IQ9P0X4 2223 aa8.88□□□□□ -0.99
HDAC6-234ENST00000493923 CCDC151A5D8V7 595 aa8.87□□□□□ -0.99
HDAC6-234ENST00000493923 H0YHG0 523 aa8.87□□□□□ -0.99
HDAC6-234ENST00000493923 SLC16A4O15374 487 aa8.87□□□□□ -0.99
HDAC6-234ENST00000493923 PI15O43692 258 aa8.87□□□□□ -0.99
HDAC6-234ENST00000493923 TADA2AO75478 443 aa8.87□□□□□ -0.99
HDAC6-234ENST00000493923 TADA3O75528 432 aa8.87□□□□□ -0.99
HDAC6-234ENST00000493923 PAPLNO95428 1278 aa8.87□□□□□ -0.99
HDAC6-234ENST00000493923 GLUD1P00367 558 aa8.87□□□□□ -0.99
HDAC6-234ENST00000493923 ADH1AP07327 375 aa8.87□□□□□ -0.99
HDAC6-234ENST00000493923 NPR3P17342 541 aa8.87□□□□□ -0.99
HDAC6-234ENST00000493923 PDCP20941 246 aa8.87□□□□□ -0.99
HDAC6-234ENST00000493923 GJB2P29033 226 aa8.87□□□□□ -0.99
HDAC6-234ENST00000493923 BRCC3P46736 316 aa8.87□□□□□ -0.99
HDAC6-234ENST00000493923 GYS2P54840 703 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms