RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 FBXL5Q9UKA1 691 aa18.12■□□□□ 0.49
PTPRU-208ENST00000493601 MAFFQ9ULX9 164 aa18.12■□□□□ 0.49
PTPRU-208ENST00000493601 PCDHB8Q9UN66 801 aa18.12■□□□□ 0.49
PTPRU-208ENST00000493601 INSL5Q9Y5Q6 135 aa18.12■□□□□ 0.49
PTPRU-208ENST00000493601 ECI2O75521 394 aa18.11■□□□□ 0.49
PTPRU-208ENST00000493601 PRKCQQ04759 706 aa18.11■□□□□ 0.49
PTPRU-208ENST00000493601 PPP2R3AQ06190 1150 aa18.11■□□□□ 0.49
PTPRU-208ENST00000493601 MLF2Q15773 248 aaPredicted RBP18.11■□□□□ 0.49
PTPRU-208ENST00000493601 SLC5A9Q2M3M2 681 aa18.11■□□□□ 0.49
PTPRU-208ENST00000493601 LARP1BQ659C4 914 aaKnown RBP18.11■□□□□ 0.49
PTPRU-208ENST00000493601 ELMOD1Q8N336 334 aa18.11■□□□□ 0.49
PTPRU-208ENST00000493601 RASSF8Q8NHQ8 419 aa18.11■□□□□ 0.49
PTPRU-208ENST00000493601 DDX12PQ92771 950 aa18.11■□□□□ 0.49
PTPRU-208ENST00000493601 KIF12Q96FN5 646 aa18.11■□□□□ 0.49
PTPRU-208ENST00000493601 FOXQ1Q9C009 403 aa18.11■□□□□ 0.49
PTPRU-208ENST00000493601 DLGAP2Q9P1A6 1054 aa18.11■□□□□ 0.49
PTPRU-208ENST00000493601 FAM186AA6NE01 2351 aa18.11■□□□□ 0.49
PTPRU-208ENST00000493601 RIF1Q5UIP0 2472 aaKnown RBP18.11■□□□□ 0.49
PTPRU-208ENST00000493601 TTC26A0AVF1 554 aa18.1■□□□□ 0.49
PTPRU-208ENST00000493601 K7ENM7 598 aa18.1■□□□□ 0.49
PTPRU-208ENST00000493601 XPOTO43592 962 aaKnown RBP18.1■□□□□ 0.49
PTPRU-208ENST00000493601 FAM13AO94988 1023 aa18.1■□□□□ 0.49
PTPRU-208ENST00000493601 CPB1P15086 417 aa18.1■□□□□ 0.49
PTPRU-208ENST00000493601 CEBPBP17676 345 aa18.1■□□□□ 0.49
PTPRU-208ENST00000493601 MARCKSP29966 332 aaPredicted RBP18.1■□□□□ 0.49
PTPRU-208ENST00000493601 LRPAP1P30533 357 aa18.1■□□□□ 0.49
PTPRU-208ENST00000493601 ABCD1P33897 745 aa18.1■□□□□ 0.49
PTPRU-208ENST00000493601 LONP1P36776 959 aaKnown RBP18.1■□□□□ 0.49
PTPRU-208ENST00000493601 ZNF131P52739 623 aa18.1■□□□□ 0.49
PTPRU-208ENST00000493601 SNW1Q13573 536 aaKnown RBP18.1■□□□□ 0.49
PTPRU-208ENST00000493601 TSPAN18Q96SJ8 248 aa18.1■□□□□ 0.49
PTPRU-208ENST00000493601 CORO1BQ9BR76 489 aa18.1■□□□□ 0.49
PTPRU-208ENST00000493601 OXCT2Q9BYC2 517 aaPredicted RBP18.1■□□□□ 0.49
PTPRU-208ENST00000493601 HAPLN2Q9GZV7 340 aa18.1■□□□□ 0.49
PTPRU-208ENST00000493601 PARVGQ9HBI0 331 aa18.1■□□□□ 0.49
PTPRU-208ENST00000493601 TBX20Q9UMR3 447 aa18.1■□□□□ 0.49
PTPRU-208ENST00000493601 UBQLN1Q9UMX0 589 aaKnown RBP18.1■□□□□ 0.49
PTPRU-208ENST00000493601 PATJQ8NI35 1801 aa18.09■□□□□ 0.49
PTPRU-208ENST00000493601 FRYLO94915 3013 aa18.09■□□□□ 0.49
PTPRU-208ENST00000493601 KANSL1LA0AUZ9 987 aa18.09■□□□□ 0.49
PTPRU-208ENST00000493601 M0QZQ0 153 aa18.09■□□□□ 0.49
PTPRU-208ENST00000493601 ZNF197O14709 1029 aa18.09■□□□□ 0.49
PTPRU-208ENST00000493601 TBCAO75347 108 aaKnown RBP18.09■□□□□ 0.49
PTPRU-208ENST00000493601 MICAL2O94851 1124 aa18.09■□□□□ 0.49
PTPRU-208ENST00000493601 SEC24AO95486 1093 aa18.09■□□□□ 0.49
PTPRU-208ENST00000493601 PIGRP01833 764 aa18.09■□□□□ 0.49
PTPRU-208ENST00000493601 KRT18P05783 430 aaKnown RBP18.09■□□□□ 0.49
PTPRU-208ENST00000493601 CYP3A5P20815 502 aa18.09■□□□□ 0.49
PTPRU-208ENST00000493601 YWHAHQ04917 246 aaPredicted RBP18.09■□□□□ 0.49
PTPRU-208ENST00000493601 DHX8Q14562 1220 aaKnown RBP18.09■□□□□ 0.49
PTPRU-208ENST00000493601 SLC44A4Q53GD3 710 aa18.09■□□□□ 0.49
PTPRU-208ENST00000493601 PRSS36Q5K4E3 855 aa18.09■□□□□ 0.49
PTPRU-208ENST00000493601 ZC3H14Q6PJT7 736 aaKnown RBP18.09■□□□□ 0.49
PTPRU-208ENST00000493601 C1orf210Q8IVY1 113 aa18.09■□□□□ 0.49
PTPRU-208ENST00000493601 MYCT1Q8N699 235 aa18.09■□□□□ 0.49
PTPRU-208ENST00000493601 MCRS1Q96EZ8 462 aa18.09■□□□□ 0.49
PTPRU-208ENST00000493601 DDX23Q9BUQ8 820 aaKnown RBP18.09■□□□□ 0.49
PTPRU-208ENST00000493601 SEMA4AQ9H3S1 761 aa18.09■□□□□ 0.49
PTPRU-208ENST00000493601 AFF4Q9UHB7 1163 aaKnown RBP18.09■□□□□ 0.49
PTPRU-208ENST00000493601 COL4A3Q01955 1670 aa18.09■□□□□ 0.49
PTPRU-208ENST00000493601 PTPRZ1P23471 2315 aaPredicted RBP18.08■□□□□ 0.48
PTPRU-208ENST00000493601 OGTO15294 1046 aa18.08■□□□□ 0.48
PTPRU-208ENST00000493601 PLCG1P19174 1290 aa18.08■□□□□ 0.48
PTPRU-208ENST00000493601 TNFSF9P41273 254 aa18.08■□□□□ 0.48
PTPRU-208ENST00000493601 SPAG1Q07617 926 aa18.08■□□□□ 0.48
PTPRU-208ENST00000493601 ADCY1Q08828 1119 aa18.08■□□□□ 0.48
PTPRU-208ENST00000493601 ENOX2Q16206 610 aaKnown RBP18.08■□□□□ 0.48
PTPRU-208ENST00000493601 IQCEQ6IPM2 695 aa18.08■□□□□ 0.48
PTPRU-208ENST00000493601 PDZD4Q76G19 769 aaPredicted RBP18.08■□□□□ 0.48
PTPRU-208ENST00000493601 ADSSL1Q8N142 457 aa18.08■□□□□ 0.48
PTPRU-208ENST00000493601 LEMD2Q8NC56 503 aa18.08■□□□□ 0.48
PTPRU-208ENST00000493601 RAD54LQ92698 747 aa18.08■□□□□ 0.48
PTPRU-208ENST00000493601 ELSPBP1Q96BH3 223 aa18.08■□□□□ 0.48
PTPRU-208ENST00000493601 BCO2Q9BYV7 579 aa18.08■□□□□ 0.48
PTPRU-208ENST00000493601 OSBPL6Q9BZF3 934 aa18.08■□□□□ 0.48
PTPRU-208ENST00000493601 RPF1Q9H9Y2 349 aaKnown RBP18.08■□□□□ 0.48
PTPRU-208ENST00000493601 BLOC1S4Q9NUP1 217 aa18.08■□□□□ 0.48
PTPRU-208ENST00000493601 FANCMQ8IYD8 2048 aa18.08■□□□□ 0.48
PTPRU-208ENST00000493601 TSC2P49815 1807 aa18.07■□□□□ 0.48
PTPRU-208ENST00000493601 TRAK2O60296 914 aa18.07■□□□□ 0.48
PTPRU-208ENST00000493601 FAM189A1O60320 539 aa18.07■□□□□ 0.48
PTPRU-208ENST00000493601 OAZ2O95190 189 aa18.07■□□□□ 0.48
PTPRU-208ENST00000493601 AARSP49588 968 aaKnown RBP eCLIP18.07■□□□□ 0.48
PTPRU-208ENST00000493601 TWF1Q12792 350 aa18.07■□□□□ 0.48
PTPRU-208ENST00000493601 MCM6Q14566 821 aa18.07■□□□□ 0.48
PTPRU-208ENST00000493601 UBXN2BQ14CS0 331 aa18.07■□□□□ 0.48
PTPRU-208ENST00000493601 KARSQ15046 597 aaKnown RBP18.07■□□□□ 0.48
PTPRU-208ENST00000493601 ZBTB6Q15916 424 aa18.07■□□□□ 0.48
PTPRU-208ENST00000493601 CYP4A22Q5TCH4 519 aa18.07■□□□□ 0.48
PTPRU-208ENST00000493601 USP37Q86T82 979 aa18.07■□□□□ 0.48
PTPRU-208ENST00000493601 LRRC15Q8TF66 581 aa18.07■□□□□ 0.48
PTPRU-208ENST00000493601 ZNF512Q96ME7 567 aaPredicted RBP18.07■□□□□ 0.48
PTPRU-208ENST00000493601 MSTO1Q9BUK6 570 aa18.07■□□□□ 0.48
PTPRU-208ENST00000493601 ZHX3Q9H4I2 956 aa18.07■□□□□ 0.48
PTPRU-208ENST00000493601 ZNF292O60281 2723 aa18.07■□□□□ 0.48
PTPRU-208ENST00000493601 SPTBN4Q9H254 2564 aa18.07■□□□□ 0.48
PTPRU-208ENST00000493601 ANK1P16157 1881 aa18.06■□□□□ 0.48
PTPRU-208ENST00000493601 GVINP1Q7Z2Y8 2422 aa18.06■□□□□ 0.48
PTPRU-208ENST00000493601 A0A0B4J269 797 aa18.06■□□□□ 0.48
PTPRU-208ENST00000493601 LACTBL1A8MY62 500 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms