RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 C8orf33Q9H7E9 229 aaPredicted RBP12.05□□□□□ -0.48
SNRNP200-207ENST00000493271 C17orf75Q9HAS0 396 aa12.05□□□□□ -0.48
SNRNP200-207ENST00000493271 LMAN1LQ9HAT1 526 aa12.05□□□□□ -0.48
SNRNP200-207ENST00000493271 ASAH2Q9NR71 780 aa12.05□□□□□ -0.48
SNRNP200-207ENST00000493271 FBXL5Q9UKA1 691 aa12.05□□□□□ -0.48
SNRNP200-207ENST00000493271 RBM19Q9Y4C8 960 aaKnown RBP12.05□□□□□ -0.48
SNRNP200-207ENST00000493271 COL4A3Q01955 1670 aa12.05□□□□□ -0.48
SNRNP200-207ENST00000493271 ACACBO00763 2458 aa12.04□□□□□ -0.48
SNRNP200-207ENST00000493271 A0A087WWV3 80 aa12.04□□□□□ -0.48
SNRNP200-207ENST00000493271 I3L4J1 428 aa12.04□□□□□ -0.48
SNRNP200-207ENST00000493271 EDN1P05305 212 aa12.04□□□□□ -0.48
SNRNP200-207ENST00000493271 MCM7P33993 719 aa12.04□□□□□ -0.48
SNRNP200-207ENST00000493271 CSRP2Q16527 193 aa12.04□□□□□ -0.48
SNRNP200-207ENST00000493271 CTXN3Q4LDR2 81 aa12.04□□□□□ -0.48
SNRNP200-207ENST00000493271 DGKKQ5KSL6 1271 aa12.04□□□□□ -0.48
SNRNP200-207ENST00000493271 VITQ6UXI7 678 aa12.04□□□□□ -0.48
SNRNP200-207ENST00000493271 NSUN7Q8NE18 718 aaKnown RBP12.04□□□□□ -0.48
SNRNP200-207ENST00000493271 CSGALNACT1Q8TDX6 532 aa12.04□□□□□ -0.48
SNRNP200-207ENST00000493271 ACAP3Q96P50 834 aa12.04□□□□□ -0.48
SNRNP200-207ENST00000493271 ACO2Q99798 780 aaKnown RBP12.04□□□□□ -0.48
SNRNP200-207ENST00000493271 RAB34Q9BZG1 259 aa12.04□□□□□ -0.48
SNRNP200-207ENST00000493271 CDT1Q9H211 546 aa12.04□□□□□ -0.48
SNRNP200-207ENST00000493271 GOLGA2P5Q9HBQ8 144 aa12.04□□□□□ -0.48
SNRNP200-207ENST00000493271 PTPRHQ9HD43 1115 aa12.04□□□□□ -0.48
SNRNP200-207ENST00000493271 PARD6AQ9NPB6 346 aa12.04□□□□□ -0.48
SNRNP200-207ENST00000493271 CNTN3Q9P232 1028 aa12.04□□□□□ -0.48
SNRNP200-207ENST00000493271 COL4A2P08572 1712 aa12.03□□□□□ -0.48
SNRNP200-207ENST00000493271 TPRP12270 2363 aaKnown RBP12.03□□□□□ -0.48
SNRNP200-207ENST00000493271 WNT7AO00755 349 aa12.03□□□□□ -0.48
SNRNP200-207ENST00000493271 CHADO15335 359 aa12.03□□□□□ -0.48
SNRNP200-207ENST00000493271 EIF5BO60841 1220 aaKnown RBP12.03□□□□□ -0.48
SNRNP200-207ENST00000493271 SEC24AO95486 1093 aa12.03□□□□□ -0.48
SNRNP200-207ENST00000493271 FGF19O95750 216 aa12.03□□□□□ -0.48
SNRNP200-207ENST00000493271 CHRNB1P11230 501 aa12.03□□□□□ -0.48
SNRNP200-207ENST00000493271 MARCKSP29966 332 aaPredicted RBP12.03□□□□□ -0.48
SNRNP200-207ENST00000493271 HOXA6P31267 233 aa12.03□□□□□ -0.48
SNRNP200-207ENST00000493271 CCR2P41597 374 aa12.03□□□□□ -0.48
SNRNP200-207ENST00000493271 TRAPPC10P48553 1259 aa12.03□□□□□ -0.48
SNRNP200-207ENST00000493271 FXR2P51116 673 aaKnown RBP eCLIP12.03□□□□□ -0.487e-15■■■■□ 22.9
SNRNP200-207ENST00000493271 ARPP19P56211 112 aa12.03□□□□□ -0.48
SNRNP200-207ENST00000493271 SOX4Q06945 474 aaPredicted RBP12.03□□□□□ -0.48
SNRNP200-207ENST00000493271 SPEM2Q0P670 501 aa12.03□□□□□ -0.48
SNRNP200-207ENST00000493271 PTGDRQ13258 359 aa12.03□□□□□ -0.48
SNRNP200-207ENST00000493271 DMP1Q13316 513 aaPredicted RBP12.03□□□□□ -0.48
SNRNP200-207ENST00000493271 SIM2Q14190 667 aaPredicted RBP12.03□□□□□ -0.48
SNRNP200-207ENST00000493271 POTEHQ6S545 545 aa12.03□□□□□ -0.48
SNRNP200-207ENST00000493271 PRR23BQ6ZRT6 265 aa12.03□□□□□ -0.48
SNRNP200-207ENST00000493271 LONP2Q86WA8 852 aa12.03□□□□□ -0.48
SNRNP200-207ENST00000493271 YAF2Q8IY57 180 aa12.03□□□□□ -0.48
SNRNP200-207ENST00000493271 SYNPOQ8N3V7 929 aa12.03□□□□□ -0.48
SNRNP200-207ENST00000493271 BEST2Q8NFU1 509 aa12.03□□□□□ -0.48
SNRNP200-207ENST00000493271 ZSCAN18Q8TBC5 510 aaPredicted RBP12.03□□□□□ -0.48
SNRNP200-207ENST00000493271 TCEAL4Q96EI5 215 aa12.03□□□□□ -0.48
SNRNP200-207ENST00000493271 DRC1Q96MC2 740 aa12.03□□□□□ -0.48
SNRNP200-207ENST00000493271 KIFC3Q9BVG8 833 aa12.03□□□□□ -0.48
SNRNP200-207ENST00000493271 TIPINQ9BVW5 301 aa12.03□□□□□ -0.48
SNRNP200-207ENST00000493271 BHMT2Q9H2M3 363 aa12.03□□□□□ -0.48
SNRNP200-207ENST00000493271 SEMA4GQ9NTN9 838 aa12.03□□□□□ -0.48
SNRNP200-207ENST00000493271 DCDC2BA2VCK2 349 aa12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 CCDC169A6NNP5 214 aa12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 ARNTLO00327 626 aa12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 MYL4P12829 197 aa12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 CPB1P15086 417 aa12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 PROZP22891 400 aa12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 IGFBP6P24592 240 aaPredicted RBP12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 CCNE1P24864 410 aa12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 MCM4P33991 863 aa12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 CCT6AP40227 531 aaKnown RBP12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 NPTX2P47972 431 aa12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 CACNB1Q02641 598 aaPredicted RBP12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 YWHAHQ04917 246 aaPredicted RBP12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 FCHO2Q0JRZ9 810 aa12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 TWF1Q12792 350 aa12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 PDIA5Q14554 519 aa12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 ME3Q16798 604 aa12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 ST3GAL2Q16842 350 aa12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 PPM1JQ5JR12 505 aa12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 MPZL3Q6UWV2 235 aa12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 PRR23CQ6ZRP0 262 aa12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 HAUS6Q7Z4H7 955 aa12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 RALGPS2Q86X27 583 aaPredicted RBP12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 CEP120Q8N960 986 aa12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 DDX12PQ92771 950 aa12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 TCHPQ9BT92 498 aa12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 FOXP1Q9H334 677 aaPredicted RBP12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 SLITRK6Q9H5Y7 841 aa12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 OBP2AQ9NY56 170 aa12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 ARHGAP28Q9P2N2 729 aa12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 LRWD1Q9UFC0 647 aa12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 PCDHB8Q9UN66 801 aa12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 USP20Q9Y2K6 914 aa12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 ASB3Q9Y575 518 aa12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 F5P12259 2224 aa12.02□□□□□ -0.49
SNRNP200-207ENST00000493271 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.01□□□□□ -0.49
SNRNP200-207ENST00000493271 OR6C75A6NL08 312 aa12.01□□□□□ -0.49
SNRNP200-207ENST00000493271 HEPACAM2A8MVW5 462 aa12.01□□□□□ -0.49
SNRNP200-207ENST00000493271 MOSPD3O75425 235 aa12.01□□□□□ -0.49
SNRNP200-207ENST00000493271 TOM1L1O75674 476 aa12.01□□□□□ -0.49
SNRNP200-207ENST00000493271 KRT37O76014 449 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms