RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 AFPP02771 609 aaKnown RBP18.56■□□□□ 0.56
LIME1-208ENST00000493265 ITGB3P05106 788 aa18.56■□□□□ 0.56
LIME1-208ENST00000493265 PBX3P40426 434 aa18.56■□□□□ 0.56
LIME1-208ENST00000493265 OR1G1P47890 313 aa18.56■□□□□ 0.56
LIME1-208ENST00000493265 COPB1P53618 953 aaKnown RBP18.56■□□□□ 0.56
LIME1-208ENST00000493265 HTRA4P83105 476 aaPredicted RBP18.56■□□□□ 0.56
LIME1-208ENST00000493265 KCNH2Q12809 1159 aa18.56■□□□□ 0.56
LIME1-208ENST00000493265 TUSC3Q13454 348 aa18.56■□□□□ 0.56
LIME1-208ENST00000493265 NAB2Q15742 525 aa18.56■□□□□ 0.56
LIME1-208ENST00000493265 ZBTB6Q15916 424 aa18.56■□□□□ 0.56
LIME1-208ENST00000493265 SCARA3Q6AZY7 606 aa18.56■□□□□ 0.56
LIME1-208ENST00000493265 TRAPPC11Q7Z392 1133 aa18.56■□□□□ 0.56
LIME1-208ENST00000493265 CMTR2Q8IYT2 770 aaKnown RBP18.56■□□□□ 0.56
LIME1-208ENST00000493265 FIBCD1Q8N539 461 aa18.56■□□□□ 0.56
LIME1-208ENST00000493265 NRDE2Q9H7Z3 1164 aa18.56■□□□□ 0.56
LIME1-208ENST00000493265 RC3H2Q9HBD1 1191 aaKnown RBP18.56■□□□□ 0.56
LIME1-208ENST00000493265 LIMA1Q9UHB6 759 aaKnown RBP18.56■□□□□ 0.56
LIME1-208ENST00000493265 R3HCC1Q9Y3T6 440 aaKnown RBP18.56■□□□□ 0.56
LIME1-208ENST00000493265 MRPL42Q9Y6G3 142 aaKnown RBP18.56■□□□□ 0.56
LIME1-208ENST00000493265 COL4A6Q14031 1691 aa18.56■□□□□ 0.56
LIME1-208ENST00000493265 PDCD11Q14690 1871 aaKnown RBP18.56■□□□□ 0.56
LIME1-208ENST00000493265 ARHGEF15O94989 841 aa18.55■□□□□ 0.56
LIME1-208ENST00000493265 MXI1P50539 228 aa18.55■□□□□ 0.56
LIME1-208ENST00000493265 KCNQ1P51787 676 aa18.55■□□□□ 0.56
LIME1-208ENST00000493265 CLDN10P78369 228 aa18.55■□□□□ 0.56
LIME1-208ENST00000493265 MYL7Q01449 175 aa18.55■□□□□ 0.56
LIME1-208ENST00000493265 CBWD6Q4V339 395 aa18.55■□□□□ 0.56
LIME1-208ENST00000493265 VWA3BQ502W6 1294 aa18.55■□□□□ 0.56
LIME1-208ENST00000493265 CBWD3Q5JTY5 395 aa18.55■□□□□ 0.56
LIME1-208ENST00000493265 CBWD5Q5RIA9 395 aa18.55■□□□□ 0.56
LIME1-208ENST00000493265 TDRD10Q5VZ19 366 aaKnown RBP18.55■□□□□ 0.56
LIME1-208ENST00000493265 SV2AQ7L0J3 742 aa18.55■□□□□ 0.56
LIME1-208ENST00000493265 NT5DC4Q86YG4 428 aa18.55■□□□□ 0.56
LIME1-208ENST00000493265 C1orf127Q8N9H9 656 aa18.55■□□□□ 0.56
LIME1-208ENST00000493265 ARNTL2Q8WYA1 636 aa18.55■□□□□ 0.56
LIME1-208ENST00000493265 ELMO3Q96BJ8 720 aa18.55■□□□□ 0.56
LIME1-208ENST00000493265 TSPAN18Q96SJ8 248 aa18.55■□□□□ 0.56
LIME1-208ENST00000493265 PAAF1Q9BRP4 392 aa18.55■□□□□ 0.56
LIME1-208ENST00000493265 TMEM8AQ9HCN3 771 aa18.55■□□□□ 0.56
LIME1-208ENST00000493265 AGAP1Q9UPQ3 857 aa18.55■□□□□ 0.56
LIME1-208ENST00000493265 PRG3Q9Y2Y8 225 aaPredicted RBP18.55■□□□□ 0.56
LIME1-208ENST00000493265 MTCH2Q9Y6C9 303 aa18.55■□□□□ 0.56
LIME1-208ENST00000493265 NT5C1B-RDH14C9J2C7 533 aa18.54■□□□□ 0.56
LIME1-208ENST00000493265 PPEF2O14830 753 aa18.54■□□□□ 0.56
LIME1-208ENST00000493265 C4BPAP04003 597 aaKnown RBP18.54■□□□□ 0.56
LIME1-208ENST00000493265 BMP1P13497 986 aa18.54■□□□□ 0.56
LIME1-208ENST00000493265 POLR2BP30876 1174 aaKnown RBP18.54■□□□□ 0.56
LIME1-208ENST00000493265 PIK3CAP42336 1068 aa18.54■□□□□ 0.56
LIME1-208ENST00000493265 FMO5P49326 533 aa18.54■□□□□ 0.56
LIME1-208ENST00000493265 CLCNKBP51801 687 aa18.54■□□□□ 0.56
LIME1-208ENST00000493265 AP3M2P53677 418 aa18.54■□□□□ 0.56
LIME1-208ENST00000493265 TRPC3Q13507 836 aa18.54■□□□□ 0.56
LIME1-208ENST00000493265 MIIPQ5JXC2 388 aa18.54■□□□□ 0.56
LIME1-208ENST00000493265 KRT39Q6A163 491 aa18.54■□□□□ 0.56
LIME1-208ENST00000493265 COLGALT2Q8IYK4 626 aa18.54■□□□□ 0.56
LIME1-208ENST00000493265 HASPINQ8TF76 798 aa18.54■□□□□ 0.56
LIME1-208ENST00000493265 NDST4Q9H3R1 872 aa18.54■□□□□ 0.56
LIME1-208ENST00000493265 CWH43Q9H720 699 aa18.54■□□□□ 0.56
LIME1-208ENST00000493265 F8W810 466 aa18.53■□□□□ 0.56
LIME1-208ENST00000493265 PODXLO00592 558 aa18.53■□□□□ 0.56
LIME1-208ENST00000493265 CYP3A5P20815 502 aa18.53■□□□□ 0.56
LIME1-208ENST00000493265 GTF2H1P32780 548 aa18.53■□□□□ 0.56
LIME1-208ENST00000493265 SLC11A1P49279 550 aa18.53■□□□□ 0.56
LIME1-208ENST00000493265 BCAR1P56945 870 aa18.53■□□□□ 0.56
LIME1-208ENST00000493265 FANCCQ00597 558 aa18.53■□□□□ 0.56
LIME1-208ENST00000493265 TAP1Q03518 808 aa18.53■□□□□ 0.56
LIME1-208ENST00000493265 ENPEPQ07075 957 aa18.53■□□□□ 0.56
LIME1-208ENST00000493265 DSC1Q08554 894 aa18.53■□□□□ 0.56
LIME1-208ENST00000493265 C9orf57Q5W0N0 161 aa18.53■□□□□ 0.56
LIME1-208ENST00000493265 TAS1R2Q8TE23 839 aa18.53■□□□□ 0.56
LIME1-208ENST00000493265 RSPH1Q8WYR4 309 aa18.53■□□□□ 0.56
LIME1-208ENST00000493265 CRACR2AQ9BSW2 395 aa18.53■□□□□ 0.56
LIME1-208ENST00000493265 SIX4Q9UIU6 781 aa18.53■□□□□ 0.56
LIME1-208ENST00000493265 ITGA11Q9UKX5 1188 aa18.53■□□□□ 0.56
LIME1-208ENST00000493265 FAN1Q9Y2M0 1017 aa18.53■□□□□ 0.56
LIME1-208ENST00000493265 NRP1O14786 923 aa18.52■□□□□ 0.56
LIME1-208ENST00000493265 VNN1O95497 513 aa18.52■□□□□ 0.56
LIME1-208ENST00000493265 CST3P01034 146 aaPredicted RBP18.52■□□□□ 0.56
LIME1-208ENST00000493265 HLA-DRAP01903 254 aa18.52■□□□□ 0.56
LIME1-208ENST00000493265 ALDH2P05091 517 aa18.52■□□□□ 0.56
LIME1-208ENST00000493265 IGFBP6P24592 240 aaPredicted RBP18.52■□□□□ 0.56
LIME1-208ENST00000493265 RBP5P82980 135 aa18.52■□□□□ 0.56
LIME1-208ENST00000493265 NCOA4Q13772 614 aa18.52■□□□□ 0.56
LIME1-208ENST00000493265 AAK1Q2M2I8 961 aa18.52■□□□□ 0.56
LIME1-208ENST00000493265 ZACNQ401N2 412 aa18.52■□□□□ 0.56
LIME1-208ENST00000493265 SPRED2Q7Z698 418 aa18.52■□□□□ 0.56
LIME1-208ENST00000493265 PI4K2AQ9BTU6 479 aa18.52■□□□□ 0.56
LIME1-208ENST00000493265 IFNKQ9P0W0 207 aa18.52■□□□□ 0.56
LIME1-208ENST00000493265 MTUS1Q9ULD2 1270 aa18.52■□□□□ 0.56
LIME1-208ENST00000493265 N4BP1O75113 896 aaKnown RBP18.51■□□□□ 0.55
LIME1-208ENST00000493265 LRRN2O75325 713 aa18.51■□□□□ 0.55
LIME1-208ENST00000493265 GALTP07902 379 aa18.51■□□□□ 0.55
LIME1-208ENST00000493265 RPL9P32969 192 aaKnown RBP18.51■□□□□ 0.55
LIME1-208ENST00000493265 ALDH7A1P49419 539 aaKnown RBP18.51■□□□□ 0.55
LIME1-208ENST00000493265 MYL6P60660 151 aa18.51■□□□□ 0.55
LIME1-208ENST00000493265 UBXN1Q04323 297 aa18.51■□□□□ 0.55
LIME1-208ENST00000493265 PTPN21Q16825 1174 aa18.51■□□□□ 0.55
LIME1-208ENST00000493265 UPP1Q16831 310 aa18.51■□□□□ 0.55
LIME1-208ENST00000493265 FILIP1LQ4L180 1135 aa18.51■□□□□ 0.55
LIME1-208ENST00000493265 FKBP15Q5T1M5 1219 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms