RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 NUB1Q9Y5A7 615 aa12.07□□□□□ -0.48
SND1-215ENST00000492772 F5P12259 2224 aa12.06□□□□□ -0.48
SND1-215ENST00000492772 K7ERI5 159 aa12.06□□□□□ -0.48
SND1-215ENST00000492772 ZNF263O14978 683 aa12.06□□□□□ -0.48
SND1-215ENST00000492772 SEC24AO95486 1093 aa12.06□□□□□ -0.48
SND1-215ENST00000492772 OR52Z1P0C646 297 aa12.06□□□□□ -0.48
SND1-215ENST00000492772 KCNE1P15382 129 aa12.06□□□□□ -0.48
SND1-215ENST00000492772 RPL9P32969 192 aaKnown RBP12.06□□□□□ -0.48
SND1-215ENST00000492772 CNR2P34972 360 aa12.06□□□□□ -0.48
SND1-215ENST00000492772 CCR2P41597 374 aa12.06□□□□□ -0.48
SND1-215ENST00000492772 CXCL12P48061 93 aa12.06□□□□□ -0.48
SND1-215ENST00000492772 EPHA5P54756 1037 aa12.06□□□□□ -0.48
SND1-215ENST00000492772 MRPL58Q14197 206 aaKnown RBP12.06□□□□□ -0.48
SND1-215ENST00000492772 LPAL2Q16609 132 aa12.06□□□□□ -0.48
SND1-215ENST00000492772 ST3GAL2Q16842 350 aa12.06□□□□□ -0.48
SND1-215ENST00000492772 CTXN3Q4LDR2 81 aa12.06□□□□□ -0.48
SND1-215ENST00000492772 PPM1JQ5JR12 505 aa12.06□□□□□ -0.48
SND1-215ENST00000492772 ALKAL1Q6UXT8 129 aa12.06□□□□□ -0.48
SND1-215ENST00000492772 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.06□□□□□ -0.48
SND1-215ENST00000492772 CEP120Q8N960 986 aa12.06□□□□□ -0.48
SND1-215ENST00000492772 NSUN7Q8NE18 718 aaKnown RBP12.06□□□□□ -0.48
SND1-215ENST00000492772 APPL2Q8NEU8 664 aa12.06□□□□□ -0.48
SND1-215ENST00000492772 ZNF512Q96ME7 567 aaPredicted RBP12.06□□□□□ -0.48
SND1-215ENST00000492772 GPR88Q9GZN0 384 aa12.06□□□□□ -0.48
SND1-215ENST00000492772 CNTN3Q9P232 1028 aa12.06□□□□□ -0.48
SND1-215ENST00000492772 AFF4Q9UHB7 1163 aaKnown RBP12.06□□□□□ -0.48
SND1-215ENST00000492772 FBXL5Q9UKA1 691 aa12.06□□□□□ -0.48
SND1-215ENST00000492772 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.06□□□□□ -0.48
SND1-215ENST00000492772 CHD8Q9HCK8 2581 aa12.06□□□□□ -0.48
SND1-215ENST00000492772 NUP210Q8TEM1 1887 aaPredicted RBP12.06□□□□□ -0.48
SND1-215ENST00000492772 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.05□□□□□ -0.48
SND1-215ENST00000492772 PAPSS2O95340 614 aaPredicted RBP12.05□□□□□ -0.48
SND1-215ENST00000492772 MCF2P10911 925 aa12.05□□□□□ -0.48
SND1-215ENST00000492772 CPB1P15086 417 aa12.05□□□□□ -0.48
SND1-215ENST00000492772 ANAPC15P60006 121 aa12.05□□□□□ -0.48
SND1-215ENST00000492772 SATB1Q01826 763 aa12.05□□□□□ -0.48
SND1-215ENST00000492772 TWF1Q12792 350 aa12.05□□□□□ -0.48
SND1-215ENST00000492772 PTGDRQ13258 359 aa12.05□□□□□ -0.48
SND1-215ENST00000492772 PLD1Q13393 1074 aa12.05□□□□□ -0.48
SND1-215ENST00000492772 SIM2Q14190 667 aaPredicted RBP12.05□□□□□ -0.48
SND1-215ENST00000492772 SAFBQ15424 915 aaKnown RBP eCLIP12.05□□□□□ -0.48
SND1-215ENST00000492772 CSRP2Q16527 193 aa12.05□□□□□ -0.48
SND1-215ENST00000492772 PRR23CQ6ZRP0 262 aa12.05□□□□□ -0.48
SND1-215ENST00000492772 MFSD6LQ8IWD5 586 aa12.05□□□□□ -0.48
SND1-215ENST00000492772 SPEM1Q8N4L4 309 aa12.05□□□□□ -0.48
SND1-215ENST00000492772 NECAB1Q8N987 351 aa12.05□□□□□ -0.48
SND1-215ENST00000492772 ZSCAN18Q8TBC5 510 aaPredicted RBP12.05□□□□□ -0.48
SND1-215ENST00000492772 CSGALNACT1Q8TDX6 532 aa12.05□□□□□ -0.48
SND1-215ENST00000492772 DDX1Q92499 740 aaKnown RBP12.05□□□□□ -0.48
SND1-215ENST00000492772 SUSD3Q96L08 255 aa12.05□□□□□ -0.48
SND1-215ENST00000492772 ACO2Q99798 780 aaKnown RBP12.05□□□□□ -0.48
SND1-215ENST00000492772 MRPL4Q9BYD3 311 aaKnown RBP12.05□□□□□ -0.48
SND1-215ENST00000492772 SLITRK6Q9H5Y7 841 aa12.05□□□□□ -0.48
SND1-215ENST00000492772 SEMA4GQ9NTN9 838 aa12.05□□□□□ -0.48
SND1-215ENST00000492772 MAP1BP46821 2468 aaKnown RBP12.05□□□□□ -0.48
SND1-215ENST00000492772 ARNTLO00327 626 aa12.04□□□□□ -0.48
SND1-215ENST00000492772 MOSPD3O75425 235 aa12.04□□□□□ -0.48
SND1-215ENST00000492772 CHRNB1P11230 501 aa12.04□□□□□ -0.48
SND1-215ENST00000492772 MYL4P12829 197 aa12.04□□□□□ -0.48
SND1-215ENST00000492772 CCNE1P24864 410 aa12.04□□□□□ -0.48
SND1-215ENST00000492772 MCM4P33991 863 aa12.04□□□□□ -0.48
SND1-215ENST00000492772 CCT6AP40227 531 aaKnown RBP12.04□□□□□ -0.48
SND1-215ENST00000492772 VIPR2P41587 438 aa12.04□□□□□ -0.48
SND1-215ENST00000492772 FOSBP53539 338 aa12.04□□□□□ -0.48
SND1-215ENST00000492772 OSTNP61366 133 aa12.04□□□□□ -0.48
SND1-215ENST00000492772 DMP1Q13316 513 aaPredicted RBP12.04□□□□□ -0.48
SND1-215ENST00000492772 ME3Q16798 604 aa12.04□□□□□ -0.48
SND1-215ENST00000492772 LONP2Q86WA8 852 aa12.04□□□□□ -0.48
SND1-215ENST00000492772 YAF2Q8IY57 180 aa12.04□□□□□ -0.48
SND1-215ENST00000492772 HS6ST3Q8IZP7 471 aa12.04□□□□□ -0.48
SND1-215ENST00000492772 ZSWIM3Q96MP5 696 aa12.04□□□□□ -0.48
SND1-215ENST00000492772 ZMAT2Q96NC0 199 aaKnown RBP12.04□□□□□ -0.48
SND1-215ENST00000492772 ACAP3Q96P50 834 aa12.04□□□□□ -0.48
SND1-215ENST00000492772 OXCT2Q9BYC2 517 aaPredicted RBP12.04□□□□□ -0.48
SND1-215ENST00000492772 BHMT2Q9H2M3 363 aa12.04□□□□□ -0.48
SND1-215ENST00000492772 TMEM134Q9H6X4 195 aa12.04□□□□□ -0.48
SND1-215ENST00000492772 C8orf33Q9H7E9 229 aaPredicted RBP12.04□□□□□ -0.48
SND1-215ENST00000492772 PTPRHQ9HD43 1115 aa12.04□□□□□ -0.48
SND1-215ENST00000492772 CEP72Q9P209 647 aa12.04□□□□□ -0.48
SND1-215ENST00000492772 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.04□□□□□ -0.48
SND1-215ENST00000492772 STK24Q9Y6E0 443 aa12.04□□□□□ -0.48
SND1-215ENST00000492772 RALGAPA1Q6GYQ0 2036 aa12.04□□□□□ -0.48
SND1-215ENST00000492772 USP24Q9UPU5 2620 aa12.04□□□□□ -0.48
SND1-215ENST00000492772 CCDC169A6NNP5 214 aa12.03□□□□□ -0.48
SND1-215ENST00000492772 HEPACAM2A8MVW5 462 aa12.03□□□□□ -0.48
SND1-215ENST00000492772 CHURC1-FNTBB4DL54 471 aa12.03□□□□□ -0.48
SND1-215ENST00000492772 NRG2O14511 850 aaPredicted RBP12.03□□□□□ -0.48
SND1-215ENST00000492772 CHADO15335 359 aa12.03□□□□□ -0.48
SND1-215ENST00000492772 LARGE1O95461 756 aa12.03□□□□□ -0.48
SND1-215ENST00000492772 PROZP22891 400 aa12.03□□□□□ -0.48
SND1-215ENST00000492772 NPTX2P47972 431 aa12.03□□□□□ -0.48
SND1-215ENST00000492772 FNTBP49356 437 aa12.03□□□□□ -0.48
SND1-215ENST00000492772 KPNA1P52294 538 aaPredicted RBP12.03□□□□□ -0.48
SND1-215ENST00000492772 PEX3P56589 373 aa12.03□□□□□ -0.48
SND1-215ENST00000492772 FCHO2Q0JRZ9 810 aa12.03□□□□□ -0.48
SND1-215ENST00000492772 GAS6Q14393 721 aa12.03□□□□□ -0.48
SND1-215ENST00000492772 TEAD2Q15562 447 aa12.03□□□□□ -0.48
SND1-215ENST00000492772 DGKKQ5KSL6 1271 aa12.03□□□□□ -0.48
SND1-215ENST00000492772 MPZL3Q6UWV2 235 aa12.03□□□□□ -0.48
SND1-215ENST00000492772 SHKBP1Q8TBC3 707 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms